RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 PMFBP1Q8TBY8 1022 aa34.6■■■■□ 3.13
U2AF1-208ENST00000471250 STRCQ7RTU9 1775 aa34.59■■■■□ 3.13
U2AF1-208ENST00000471250 PROSER2Q86WR7 435 aaPredicted RBP34.59■■■■□ 3.13
U2AF1-208ENST00000471250 NGDNQ8NEJ9 315 aaKnown RBP34.57■■■■□ 3.12
U2AF1-208ENST00000471250 COG3Q96JB2 828 aa34.56■■■■□ 3.12
U2AF1-208ENST00000471250 STRCP1A6NGW2 1772 aa34.56■■■■□ 3.12
U2AF1-208ENST00000471250 SENP3-EIF4A1A0A087X0R7 540 aa34.55■■■■□ 3.12
U2AF1-208ENST00000471250 ZRANB1Q9UGI0 708 aa34.55■■■■□ 3.12
U2AF1-208ENST00000471250 TTC21AQ8NDW8 1320 aa34.54■■■■□ 3.12
U2AF1-208ENST00000471250 C14orf37Q86TY3 774 aa34.54■■■■□ 3.12
U2AF1-208ENST00000471250 COL3A1P02461 1466 aaPredicted RBP34.52■■■■□ 3.12
U2AF1-208ENST00000471250 AATKQ6ZMQ8 1374 aa34.52■■■■□ 3.12
U2AF1-208ENST00000471250 MAP2P11137 1827 aaKnown RBP34.5■■■■□ 3.11
U2AF1-208ENST00000471250 PNPLA6Q8IY17 1366 aa34.5■■■■□ 3.11
U2AF1-208ENST00000471250 POLKQ9UBT6 870 aa34.49■■■■□ 3.11
U2AF1-208ENST00000471250 OVOS2A0A0J9YW53 1432 aa34.49■■■■□ 3.11
U2AF1-208ENST00000471250 OVOS2Q6IE36 1432 aa34.49■■■■□ 3.11
U2AF1-208ENST00000471250 SMG6Q86US8 1419 aaKnown RBP34.49■■■■□ 3.11
U2AF1-208ENST00000471250 NCOA3Q9Y6Q9 1424 aa34.49■■■■□ 3.11
U2AF1-208ENST00000471250 PHF8Q9UPP1 1060 aa34.48■■■■□ 3.11
U2AF1-208ENST00000471250 SALL2Q9Y467 1007 aaPredicted RBP34.45■■■■□ 3.11
U2AF1-208ENST00000471250 PDE3BQ13370 1112 aa34.44■■■■□ 3.1
U2AF1-208ENST00000471250 C19orf44Q9H6X5 657 aa34.44■■■■□ 3.1
U2AF1-208ENST00000471250 CCDC146Q8IYE0 955 aa34.44■■■■□ 3.1
U2AF1-208ENST00000471250 FBLN1P23142 703 aa34.43■■■■□ 3.1
U2AF1-208ENST00000471250 NUDCQ9Y266 331 aa34.43■■■■□ 3.1
U2AF1-208ENST00000471250 TMEM94Q12767 1356 aa34.42■■■■□ 3.1
U2AF1-208ENST00000471250 USP31Q70CQ4 1352 aa34.42■■■■□ 3.1
U2AF1-208ENST00000471250 PIK3C2AO00443 1686 aa34.39■■■■□ 3.1
U2AF1-208ENST00000471250 ESCO1Q5FWF5 840 aa34.39■■■■□ 3.1
U2AF1-208ENST00000471250 CDK12Q9NYV4 1490 aaPredicted RBP34.39■■■■□ 3.1
U2AF1-208ENST00000471250 DIAPH1O60610 1272 aaKnown RBP34.38■■■■□ 3.09
U2AF1-208ENST00000471250 DCCP43146 1447 aa34.37■■■■□ 3.09
U2AF1-208ENST00000471250 RUNDC1Q96C34 613 aa34.37■■■■□ 3.09
U2AF1-208ENST00000471250 EMILIN1Q9Y6C2 1016 aa34.37■■■■□ 3.09
U2AF1-208ENST00000471250 USP54Q70EL1 1684 aa34.37■■■■□ 3.09
U2AF1-208ENST00000471250 APAF1O14727 1248 aa34.36■■■■□ 3.09
U2AF1-208ENST00000471250 U2AF1L5P0DN76 240 aaPredicted RBP34.36■■■■□ 3.09
U2AF1-208ENST00000471250 U2AF1Q01081 240 aaKnown RBP eCLIP34.36■■■■□ 3.09
U2AF1-208ENST00000471250 NGEFQ8N5V2 710 aa34.36■■■■□ 3.09
U2AF1-208ENST00000471250 C1orf167Q5SNV9 1468 aa34.34■■■■□ 3.09
U2AF1-208ENST00000471250 PPM1GO15355 546 aaPredicted RBP34.34■■■■□ 3.09
U2AF1-208ENST00000471250 ZNF521Q96K83 1311 aa34.32■■■■□ 3.09
U2AF1-208ENST00000471250 RRS1Q15050 365 aaKnown RBP34.31■■■■□ 3.08
U2AF1-208ENST00000471250 ORAI2Q96SN7 254 aa34.31■■■■□ 3.08
U2AF1-208ENST00000471250 KIF1AQ12756 1690 aa34.31■■■■□ 3.08
U2AF1-208ENST00000471250 U2SURPO15042 1029 aaKnown RBP34.31■■■■□ 3.08
U2AF1-208ENST00000471250 SUPT16HQ9Y5B9 1047 aaKnown RBP34.31■■■■□ 3.08
U2AF1-208ENST00000471250 IQSEC2Q5JU85 1478 aa34.3■■■■□ 3.08
U2AF1-208ENST00000471250 ATF3P18847 181 aa34.3■■■■□ 3.08
U2AF1-208ENST00000471250 XIRP1Q702N8 1843 aaKnown RBP34.3■■■■□ 3.08
U2AF1-208ENST00000471250 MARF1Q9Y4F3 1742 aaKnown RBP34.29■■■■□ 3.08
U2AF1-208ENST00000471250 LRRC7Q96NW7 1537 aa34.29■■■■□ 3.08
U2AF1-208ENST00000471250 MST1RQ04912 1400 aa34.29■■■■□ 3.08
U2AF1-208ENST00000471250 PSME1Q06323 249 aa34.28■■■■□ 3.08
U2AF1-208ENST00000471250 NLRP6P59044 892 aa34.27■■■■□ 3.08
U2AF1-208ENST00000471250 CDCA7LQ96GN5 454 aa34.26■■■■□ 3.08
U2AF1-208ENST00000471250 PAK3O75914 559 aaPredicted RBP34.25■■■■□ 3.07
U2AF1-208ENST00000471250 IL13P35225 146 aa34.25■■■■□ 3.07
U2AF1-208ENST00000471250 ABTB2Q8N961 1025 aa34.25■■■■□ 3.07
U2AF1-208ENST00000471250 MSH6P52701 1360 aa34.24■■■■□ 3.07
U2AF1-208ENST00000471250 CADPS2Q86UW7 1296 aa34.24■■■■□ 3.07
U2AF1-208ENST00000471250 NCBP3Q53F19 620 aaKnown RBP34.23■■■■□ 3.07
U2AF1-208ENST00000471250 TCP11L2Q8N4U5 519 aa34.23■■■■□ 3.07
U2AF1-208ENST00000471250 PLEKHF1Q96S99 279 aa34.23■■■■□ 3.07
U2AF1-208ENST00000471250 ZNF335Q9H4Z2 1342 aaPredicted RBP34.23■■■■□ 3.07
U2AF1-208ENST00000471250 NEFLP07196 543 aa34.22■■■■□ 3.07
U2AF1-208ENST00000471250 PEAK1Q9H792 1746 aa34.22■■■■□ 3.07
U2AF1-208ENST00000471250 PNNQ9H307 717 aaKnown RBP34.22■■■■□ 3.07
U2AF1-208ENST00000471250 DMRT2Q9Y5R5 561 aa34.22■■■■□ 3.07
U2AF1-208ENST00000471250 FOXO3O43524 673 aa34.2■■■■□ 3.07
U2AF1-208ENST00000471250 GOLGA2Q08379 1002 aa34.2■■■■□ 3.07
U2AF1-208ENST00000471250 FCHSD2O94868 740 aa34.19■■■■□ 3.06
U2AF1-208ENST00000471250 TRPM3Q9HCF6 1732 aaPredicted RBP34.17■■■■□ 3.06
U2AF1-208ENST00000471250 NUTM2GQ5VZR2 741 aa34.17■■■■□ 3.06
U2AF1-208ENST00000471250 MAP3K19Q56UN5 1328 aa34.17■■■■□ 3.06
U2AF1-208ENST00000471250 SOX12O15370 315 aa34.15■■■■□ 3.06
U2AF1-208ENST00000471250 FKBP8Q14318 412 aa34.15■■■■□ 3.06
U2AF1-208ENST00000471250 SBNO1A3KN83 1393 aa34.15■■■■□ 3.06
U2AF1-208ENST00000471250 CCDC27Q2M243 656 aa34.15■■■■□ 3.06
U2AF1-208ENST00000471250 PHF23Q9BUL5 403 aaPredicted RBP34.15■■■■□ 3.06
U2AF1-208ENST00000471250 WWC1Q8IX03 1113 aa34.14■■■■□ 3.06
U2AF1-208ENST00000471250 RSPH6AQ9H0K4 717 aa34.14■■■■□ 3.06
U2AF1-208ENST00000471250 SLFN5Q08AF3 891 aa34.13■■■■□ 3.05
U2AF1-208ENST00000471250 KRT28Q7Z3Y7 464 aa34.13■■■■□ 3.05
U2AF1-208ENST00000471250 MAPK8IP3Q9UPT6 1336 aa34.13■■■■□ 3.05
U2AF1-208ENST00000471250 RRP7AQ9Y3A4 280 aaKnown RBP34.12■■■■□ 3.05
U2AF1-208ENST00000471250 FLT4P35916 1363 aa34.12■■■■□ 3.05
U2AF1-208ENST00000471250 EIF4A2Q14240 407 aaKnown RBP34.12■■■■□ 3.05
U2AF1-208ENST00000471250 KIF24Q5T7B8 1368 aa34.11■■■■□ 3.05
U2AF1-208ENST00000471250 TRMT2AQ8IZ69 625 aaKnown RBP34.11■■■■□ 3.05
U2AF1-208ENST00000471250 NEUROD2Q15784 382 aa34.1■■■■□ 3.05
U2AF1-208ENST00000471250 DUSP27Q5VZP5 1158 aa34.1■■■■□ 3.05
U2AF1-208ENST00000471250 RNF123Q5XPI4 1314 aa34.1■■■■□ 3.05
U2AF1-208ENST00000471250 XPCQ01831 940 aaPredicted RBP34.09■■■■□ 3.05
U2AF1-208ENST00000471250 HSP90AB2PQ58FF8 381 aa34.09■■■■□ 3.05
U2AF1-208ENST00000471250 PRKAR2BP31323 418 aa34.07■■■■□ 3.04
U2AF1-208ENST00000471250 TMPOP42166 694 aaKnown RBP34.07■■■■□ 3.04
U2AF1-208ENST00000471250 E9PSI1 815 aa34.06■■■■□ 3.04
U2AF1-208ENST00000471250 AMPHP49418 695 aa34.06■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms