RNA–Protein interactions for RNA: ENST00000471220.5

CD53-203, Transcript of CD53 molecule, humanhuman

TSL 2

Gene CD53, Length 657 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-203ENST00000471220 SLC24A1O60721 1099 aa11.51□□□□□ -0.57
CD53-203ENST00000471220 PIP4K2BP78356 416 aa11.51□□□□□ -0.57
CD53-203ENST00000471220 BRINP3Q76B58 766 aa11.5□□□□□ -0.57
CD53-203ENST00000471220 ESCO1Q5FWF5 840 aa11.49□□□□□ -0.57
CD53-203ENST00000471220 PUS7Q96PZ0 661 aaKnown RBP11.49□□□□□ -0.57
CD53-203ENST00000471220 CCDC61Q9Y6R9 512 aa11.49□□□□□ -0.57
CD53-203ENST00000471220 ATAD2Q6PL18 1390 aa11.49□□□□□ -0.57
CD53-203ENST00000471220 PPIP5K1Q6PFW1 1433 aa11.49□□□□□ -0.57
CD53-203ENST00000471220 PHF8Q9UPP1 1060 aa11.48□□□□□ -0.57
CD53-203ENST00000471220 KIF1AQ12756 1690 aa11.48□□□□□ -0.57
CD53-203ENST00000471220 MYOM1P52179 1685 aa11.47□□□□□ -0.57
CD53-203ENST00000471220 NHSL1Q5SYE7 1610 aa11.47□□□□□ -0.57
CD53-203ENST00000471220 KIF7Q2M1P5 1343 aa11.47□□□□□ -0.57
CD53-203ENST00000471220 PLEKHG3A1L390 1219 aa11.47□□□□□ -0.57
CD53-203ENST00000471220 PMFBP1Q8TBY8 1022 aa11.47□□□□□ -0.57
CD53-203ENST00000471220 DDX17Q92841 729 aaKnown RBP11.47□□□□□ -0.57
CD53-203ENST00000471220 CABP1Q9NZU7 370 aa11.47□□□□□ -0.57
CD53-203ENST00000471220 CDCA8Q53HL2 280 aa11.46□□□□□ -0.57
CD53-203ENST00000471220 AHDC1Q5TGY3 1603 aaPredicted RBP11.46□□□□□ -0.58
CD53-203ENST00000471220 POLR3AO14802 1390 aaPredicted RBP11.45□□□□□ -0.58
CD53-203ENST00000471220 WASHC2AQ641Q2 1341 aa11.45□□□□□ -0.58
CD53-203ENST00000471220 FOXO3O43524 673 aa11.45□□□□□ -0.58
CD53-203ENST00000471220 TMC1Q8TDI8 760 aa11.45□□□□□ -0.58
CD53-203ENST00000471220 FBXO41Q8TF61 875 aa11.45□□□□□ -0.58
CD53-203ENST00000471220 POLR3GLQ9BT43 218 aa11.45□□□□□ -0.58
CD53-203ENST00000471220 SLC12A5Q9H2X9 1139 aa11.45□□□□□ -0.58
CD53-203ENST00000471220 AKAP12Q02952 1782 aa11.45□□□□□ -0.58
CD53-203ENST00000471220 CD163L1Q9NR16 1453 aa11.44□□□□□ -0.58
CD53-203ENST00000471220 CCDC7Q96M83 1385 aa11.44□□□□□ -0.58
CD53-203ENST00000471220 PHLPP1O60346 1717 aa11.44□□□□□ -0.58
CD53-203ENST00000471220 ACEP12821 1306 aa11.44□□□□□ -0.58
CD53-203ENST00000471220 PXDNQ92626 1479 aa11.44□□□□□ -0.58
CD53-203ENST00000471220 XPCQ01831 940 aaPredicted RBP11.43□□□□□ -0.58
CD53-203ENST00000471220 NGDNQ8NEJ9 315 aaKnown RBP11.43□□□□□ -0.58
CD53-203ENST00000471220 CPSF1Q10570 1443 aaKnown RBP11.43□□□□□ -0.58
CD53-203ENST00000471220 COL16A1Q07092 1604 aaPredicted RBP11.42□□□□□ -0.58
CD53-203ENST00000471220 NINLQ9Y2I6 1382 aa11.42□□□□□ -0.58
CD53-203ENST00000471220 NPHP3Q7Z494 1330 aa11.42□□□□□ -0.58
CD53-203ENST00000471220 MON2Q7Z3U7 1717 aa11.42□□□□□ -0.58
CD53-203ENST00000471220 TRPM3Q9HCF6 1732 aaPredicted RBP11.42□□□□□ -0.58
CD53-203ENST00000471220 A0A1W2PP64 1363 aa11.41□□□□□ -0.58
CD53-203ENST00000471220 SOS2Q07890 1332 aaPredicted RBP11.41□□□□□ -0.58
CD53-203ENST00000471220 GABBR2O75899 941 aa11.41□□□□□ -0.58
CD53-203ENST00000471220 HSPA1LP34931 641 aa11.41□□□□□ -0.58
CD53-203ENST00000471220 PSME1Q06323 249 aa11.41□□□□□ -0.58
CD53-203ENST00000471220 KRT28Q7Z3Y7 464 aa11.41□□□□□ -0.58
CD53-203ENST00000471220 USP6P35125 1406 aa11.4□□□□□ -0.58
CD53-203ENST00000471220 SSH2Q76I76 1423 aa11.4□□□□□ -0.58
CD53-203ENST00000471220 NRKQ7Z2Y5 1582 aa11.4□□□□□ -0.58
CD53-203ENST00000471220 KTN1Q86UP2 1357 aaKnown RBP11.4□□□□□ -0.59
CD53-203ENST00000471220 ANKRD36BQ8N2N9 1353 aa11.4□□□□□ -0.59
CD53-203ENST00000471220 HDGFL2Q7Z4V5 671 aaPredicted RBP11.39□□□□□ -0.59
CD53-203ENST00000471220 TERF2IPQ9NYB0 399 aa11.39□□□□□ -0.59
CD53-203ENST00000471220 ALS2Q96Q42 1657 aa11.39□□□□□ -0.59
CD53-203ENST00000471220 ZNF316A6NFI3 1004 aaPredicted RBP11.38□□□□□ -0.59
CD53-203ENST00000471220 CARD14Q9BXL6 1004 aa11.38□□□□□ -0.59
CD53-203ENST00000471220 PANK3Q9H999 370 aa11.38□□□□□ -0.59
CD53-203ENST00000471220 FARP1Q9Y4F1 1045 aaPredicted RBP11.38□□□□□ -0.59
CD53-203ENST00000471220 SBNO1A3KN83 1393 aa11.38□□□□□ -0.59
CD53-203ENST00000471220 PIK3C2AO00443 1686 aa11.36□□□□□ -0.59
CD53-203ENST00000471220 SPATA31A3Q5VYP0 1347 aa11.36□□□□□ -0.59
CD53-203ENST00000471220 TTC21BQ7Z4L5 1316 aa11.36□□□□□ -0.59
CD53-203ENST00000471220 TNS3Q68CZ2 1445 aa11.36□□□□□ -0.59
CD53-203ENST00000471220 EDC4Q6P2E9 1401 aaKnown RBP11.36□□□□□ -0.59
CD53-203ENST00000471220 PAK3O75914 559 aaPredicted RBP11.36□□□□□ -0.59
CD53-203ENST00000471220 LRRC59Q96AG4 307 aaKnown RBP11.36□□□□□ -0.59
CD53-203ENST00000471220 BRD4O60885 1362 aaPredicted RBP11.36□□□□□ -0.59
CD53-203ENST00000471220 NSD3Q9BZ95 1437 aa11.35□□□□□ -0.59
CD53-203ENST00000471220 CD44P16070 742 aaKnown RBP11.35□□□□□ -0.59
CD53-203ENST00000471220 ILDR1Q86SU0 546 aaPredicted RBP11.35□□□□□ -0.59
CD53-203ENST00000471220 PNPLA6Q8IY17 1366 aa11.35□□□□□ -0.59
CD53-203ENST00000471220 SHPRHQ149N8 1683 aa11.35□□□□□ -0.59
CD53-203ENST00000471220 MARF1Q9Y4F3 1742 aaKnown RBP11.35□□□□□ -0.59
CD53-203ENST00000471220 LMOD2Q6P5Q4 547 aa11.34□□□□□ -0.59
CD53-203ENST00000471220 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.34□□□□□ -0.59
CD53-203ENST00000471220 KIF20BQ96Q89 1820 aa11.34□□□□□ -0.59
CD53-203ENST00000471220 COL22A1Q8NFW1 1626 aaPredicted RBP11.34□□□□□ -0.59
CD53-203ENST00000471220 TTC21AQ8NDW8 1320 aa11.34□□□□□ -0.59
CD53-203ENST00000471220 ARHGEF10O15013 1369 aa11.33□□□□□ -0.6
CD53-203ENST00000471220 JCADQ9P266 1359 aa11.33□□□□□ -0.6
CD53-203ENST00000471220 CRYBG1Q9Y4K1 1723 aa11.33□□□□□ -0.6
CD53-203ENST00000471220 PER1O15534 1290 aaPredicted RBP11.33□□□□□ -0.6
CD53-203ENST00000471220 NME9Q86XW9 330 aa11.33□□□□□ -0.6
CD53-203ENST00000471220 ABTB2Q8N961 1025 aa11.33□□□□□ -0.6
CD53-203ENST00000471220 ZRANB1Q9UGI0 708 aa11.33□□□□□ -0.6
CD53-203ENST00000471220 DDX10Q13206 875 aaKnown RBP11.32□□□□□ -0.6
CD53-203ENST00000471220 NUTM2GQ5VZR2 741 aa11.32□□□□□ -0.6
CD53-203ENST00000471220 USP54Q70EL1 1684 aa11.32□□□□□ -0.6
CD53-203ENST00000471220 MED1Q15648 1581 aaPredicted RBP11.32□□□□□ -0.6
CD53-203ENST00000471220 ABCA3Q99758 1704 aa11.32□□□□□ -0.6
CD53-203ENST00000471220 FYB1O15117 783 aa11.31□□□□□ -0.6
CD53-203ENST00000471220 PHRF1Q9P1Y6 1649 aaKnown RBP11.31□□□□□ -0.6
CD53-203ENST00000471220 USP31Q70CQ4 1352 aa11.3□□□□□ -0.6
CD53-203ENST00000471220 OVOS2A0A0J9YW53 1432 aa11.3□□□□□ -0.6
CD53-203ENST00000471220 OVOS2Q6IE36 1432 aa11.3□□□□□ -0.6
CD53-203ENST00000471220 SPDYE4A6NLX3 237 aa11.3□□□□□ -0.6
CD53-203ENST00000471220 PLEKHG5O94827 1062 aa11.3□□□□□ -0.6
CD53-203ENST00000471220 NLRP6P59044 892 aa11.3□□□□□ -0.6
CD53-203ENST00000471220 CABLES1Q8TDN4 633 aa11.3□□□□□ -0.6
CD53-203ENST00000471220 GGNBP2Q9H3C7 697 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms