RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 Q6ZNB5 142 aa11.82□□□□□ -0.52
PRPF40A-206ENST00000471167 LRRN4Q8WUT4 740 aa11.82□□□□□ -0.52
PRPF40A-206ENST00000471167 WNT7BP56706 349 aa11.81□□□□□ -0.52
PRPF40A-206ENST00000471167 SIAH2O43255 324 aa11.8□□□□□ -0.52
PRPF40A-206ENST00000471167 LINC01559Q495D7 138 aa11.8□□□□□ -0.52
PRPF40A-206ENST00000471167 CTHP32929 405 aa11.79□□□□□ -0.52
PRPF40A-206ENST00000471167 RFC5P40937 340 aa11.78□□□□□ -0.52
PRPF40A-206ENST00000471167 ZNF511Q8NB15 262 aa11.77□□□□□ -0.53
PRPF40A-206ENST00000471167 SMPD1P17405 629 aa11.76□□□□□ -0.53
PRPF40A-206ENST00000471167 C4orf48Q5BLP8 95 aa11.76□□□□□ -0.53
PRPF40A-206ENST00000471167 TRAF7Q6Q0C0 670 aa11.76□□□□□ -0.53
PRPF40A-206ENST00000471167 HELBQ8NG08 1087 aaPredicted RBP11.76□□□□□ -0.53
PRPF40A-206ENST00000471167 EPS8L1Q8TE68 723 aa11.76□□□□□ -0.53
PRPF40A-206ENST00000471167 HMX1Q9NP08 348 aaPredicted RBP11.76□□□□□ -0.53
PRPF40A-206ENST00000471167 J3QL48 77 aa11.75□□□□□ -0.53
PRPF40A-206ENST00000471167 MYT1Q01538 1121 aa11.75□□□□□ -0.53
PRPF40A-206ENST00000471167 FOXJ1Q92949 421 aa11.75□□□□□ -0.53
PRPF40A-206ENST00000471167 PCMTD1Q96MG8 357 aaPredicted RBP11.75□□□□□ -0.53
PRPF40A-206ENST00000471167 FAM187AA6NFU0 413 aa11.74□□□□□ -0.53
PRPF40A-206ENST00000471167 AP1G2O75843 785 aa11.74□□□□□ -0.53
PRPF40A-206ENST00000471167 DGAT1O75907 488 aa11.74□□□□□ -0.53
PRPF40A-206ENST00000471167 CYP4X1Q8N118 509 aa11.73□□□□□ -0.53
PRPF40A-206ENST00000471167 SNIP1Q8TAD8 396 aaKnown RBP11.73□□□□□ -0.53
PRPF40A-206ENST00000471167 NR6A1Q15406 480 aa11.71□□□□□ -0.53
PRPF40A-206ENST00000471167 ATP1B4Q9UN42 357 aaPredicted RBP11.71□□□□□ -0.53
PRPF40A-206ENST00000471167 AVPP01185 164 aa11.7□□□□□ -0.54
PRPF40A-206ENST00000471167 USP17L8P0C7I0 530 aa11.7□□□□□ -0.54
PRPF40A-206ENST00000471167 EHBP1Q8NDI1 1231 aa11.69□□□□□ -0.54
PRPF40A-206ENST00000471167 TTC24A2A3L6 582 aaPredicted RBP11.68□□□□□ -0.54
PRPF40A-206ENST00000471167 ST8SIA5O15466 376 aa11.68□□□□□ -0.54
PRPF40A-206ENST00000471167 PKDCCQ504Y2 493 aa11.68□□□□□ -0.54
PRPF40A-206ENST00000471167 SH3RF1Q7Z6J0 888 aa11.68□□□□□ -0.54
PRPF40A-206ENST00000471167 OCSTAMPQ9BR26 566 aa11.68□□□□□ -0.54
PRPF40A-206ENST00000471167 TRIM34Q9BYJ4 488 aa11.68□□□□□ -0.54
PRPF40A-206ENST00000471167 SH3BP5LQ7L8J4 393 aa11.67□□□□□ -0.54
PRPF40A-206ENST00000471167 HPS1Q92902 700 aa11.67□□□□□ -0.54
PRPF40A-206ENST00000471167 DACH1Q9UI36 760 aa11.67□□□□□ -0.54
PRPF40A-206ENST00000471167 GJD4Q96KN9 370 aaPredicted RBP11.66□□□□□ -0.54
PRPF40A-206ENST00000471167 AAASQ9NRG9 546 aa11.66□□□□□ -0.54
PRPF40A-206ENST00000471167 TLL2Q9Y6L7 1015 aa11.66□□□□□ -0.54
PRPF40A-206ENST00000471167 VARSP26640 1264 aaKnown RBP11.65□□□□□ -0.54
PRPF40A-206ENST00000471167 ALDH1A1P00352 501 aa11.64□□□□□ -0.55
PRPF40A-206ENST00000471167 POTECB2RU33 542 aa11.63□□□□□ -0.55
PRPF40A-206ENST00000471167 TMEM259Q4ZIN3 620 aa11.63□□□□□ -0.55
PRPF40A-206ENST00000471167 CRIPAKQ8N1N5 446 aa11.63□□□□□ -0.55
PRPF40A-206ENST00000471167 C1QTNF2Q9BXJ5 285 aa11.63□□□□□ -0.55
PRPF40A-206ENST00000471167 FKBPLQ9UIM3 349 aa11.63□□□□□ -0.55
PRPF40A-206ENST00000471167 GPR37L1O60883 481 aa11.62□□□□□ -0.55
PRPF40A-206ENST00000471167 MPNDQ8N594 471 aa11.61□□□□□ -0.55
PRPF40A-206ENST00000471167 SMCPP49901 116 aaPredicted RBP11.6□□□□□ -0.55
PRPF40A-206ENST00000471167 ARMC2Q8NEN0 867 aa11.6□□□□□ -0.55
PRPF40A-206ENST00000471167 CDK15Q96Q40 435 aa11.6□□□□□ -0.55
PRPF40A-206ENST00000471167 SNRKQ9NRH2 765 aa11.6□□□□□ -0.55
PRPF40A-206ENST00000471167 GRM5P41594 1212 aa11.59□□□□□ -0.55
PRPF40A-206ENST00000471167 PDXDC2PQ6P474 469 aa11.58□□□□□ -0.56
PRPF40A-206ENST00000471167 BPHLQ86WA6 291 aaPredicted RBP11.58□□□□□ -0.56
PRPF40A-206ENST00000471167 MTMR14Q8NCE2 650 aa11.58□□□□□ -0.56
PRPF40A-206ENST00000471167 NBPF14Q5TI25 921 aa11.57□□□□□ -0.56
PRPF40A-206ENST00000471167 KLF16Q9BXK1 252 aaPredicted RBP11.57□□□□□ -0.56
PRPF40A-206ENST00000471167 FAM174AQ8TBP5 190 aa11.56□□□□□ -0.56
PRPF40A-206ENST00000471167 GPKOWQ92917 476 aaPredicted RBP eCLIP11.56□□□□□ -0.561e-7■■□□□ 11.5
PRPF40A-206ENST00000471167 NR3C2P08235 984 aa11.55□□□□□ -0.56
PRPF40A-206ENST00000471167 ERFEQ4G0M1 354 aa11.55□□□□□ -0.56
PRPF40A-206ENST00000471167 BANK1Q8NDB2 785 aa11.55□□□□□ -0.56
PRPF40A-206ENST00000471167 AGERQ15109 404 aa11.54□□□□□ -0.56
PRPF40A-206ENST00000471167 TRMT44Q8IYL2 757 aaKnown RBP11.54□□□□□ -0.56
PRPF40A-206ENST00000471167 MAGEB6P1A0A0J9YX57 407 aa11.53□□□□□ -0.56
PRPF40A-206ENST00000471167 AXIN1O15169 862 aa11.53□□□□□ -0.56
PRPF40A-206ENST00000471167 CTC1Q2NKJ3 1217 aa11.53□□□□□ -0.56
PRPF40A-206ENST00000471167 CARD14Q9BXL6 1004 aa11.53□□□□□ -0.56
PRPF40A-206ENST00000471167 ADH1CP00326 375 aa11.52□□□□□ -0.57
PRPF40A-206ENST00000471167 ZC3H4Q9UPT8 1303 aaKnown RBP11.52□□□□□ -0.57
PRPF40A-206ENST00000471167 NNTQ13423 1086 aa11.51□□□□□ -0.57
PRPF40A-206ENST00000471167 ARID5BQ14865 1188 aa11.51□□□□□ -0.57
PRPF40A-206ENST00000471167 ARHGAP9Q9BRR9 750 aa11.51□□□□□ -0.57
PRPF40A-206ENST00000471167 WASF2Q9Y6W5 498 aa11.51□□□□□ -0.57
PRPF40A-206ENST00000471167 SOCS7O14512 581 aa11.48□□□□□ -0.57
PRPF40A-206ENST00000471167 TIMP2P16035 220 aa11.48□□□□□ -0.57
PRPF40A-206ENST00000471167 ZNF787Q6DD87 383 aa11.48□□□□□ -0.57
PRPF40A-206ENST00000471167 ADAM32Q8TC27 787 aa11.48□□□□□ -0.57
PRPF40A-206ENST00000471167 GMPR2Q9P2T1 348 aaKnown RBP11.48□□□□□ -0.57
PRPF40A-206ENST00000471167 GPSM3Q9Y4H4 160 aa11.48□□□□□ -0.57
PRPF40A-206ENST00000471167 MAP4K5Q9Y4K4 846 aa11.48□□□□□ -0.57
PRPF40A-206ENST00000471167 ATP13A2Q9NQ11 1180 aa11.47□□□□□ -0.57
PRPF40A-206ENST00000471167 TRIM46Q7Z4K8 759 aa11.46□□□□□ -0.57
PRPF40A-206ENST00000471167 FBXO45P0C2W1 286 aa11.45□□□□□ -0.58
PRPF40A-206ENST00000471167 PTK2Q05397 1052 aa11.45□□□□□ -0.58
PRPF40A-206ENST00000471167 NR5A1Q13285 461 aa11.44□□□□□ -0.58
PRPF40A-206ENST00000471167 VASH1Q7L8A9 365 aaPredicted RBP11.44□□□□□ -0.58
PRPF40A-206ENST00000471167 ITPKCQ96DU7 683 aa11.44□□□□□ -0.58
PRPF40A-206ENST00000471167 ZFAND3Q9H8U3 227 aa11.44□□□□□ -0.58
PRPF40A-206ENST00000471167 CAPN5O15484 640 aaPredicted RBP11.43□□□□□ -0.58
PRPF40A-206ENST00000471167 BMP1P13497 986 aa11.43□□□□□ -0.58
PRPF40A-206ENST00000471167 FSHRP23945 695 aa11.43□□□□□ -0.58
PRPF40A-206ENST00000471167 ZBTB33Q86T24 672 aa11.43□□□□□ -0.58
PRPF40A-206ENST00000471167 WDR4P57081 412 aaKnown RBP11.42□□□□□ -0.58
PRPF40A-206ENST00000471167 KCTD15Q96SI1 283 aaPredicted RBP11.41□□□□□ -0.58
PRPF40A-206ENST00000471167 TBC1D2BQ9UPU7 963 aa11.41□□□□□ -0.58
PRPF40A-206ENST00000471167 SNRPBP14678 240 aaKnown RBP11.4□□□□□ -0.58
PRPF40A-206ENST00000471167 IRF5Q13568 498 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms