RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 FAM205CA6NFA0 338 aa8.05□□□□□ -1.12
HDAC8-216ENST00000470998 CAMK2BQ13554 666 aa8.05□□□□□ -1.12
HDAC8-216ENST00000470998 EMILIN3Q9NT22 766 aa8.05□□□□□ -1.12
HDAC8-216ENST00000470998 SLC52A1Q9NWF4 448 aa8.05□□□□□ -1.12
HDAC8-216ENST00000470998 ARHGAP23Q9P227 1491 aa8.05□□□□□ -1.12
HDAC8-216ENST00000470998 VWDEQ8N2E2 1590 aa8.05□□□□□ -1.12
HDAC8-216ENST00000470998 ANKRD50Q9ULJ7 1429 aa8.04□□□□□ -1.12
HDAC8-216ENST00000470998 SLIT1O75093 1534 aa8.04□□□□□ -1.12
HDAC8-216ENST00000470998 POLR1AO95602 1720 aaPredicted RBP8.04□□□□□ -1.12
HDAC8-216ENST00000470998 DPYSL4O14531 572 aa8.04□□□□□ -1.12
HDAC8-216ENST00000470998 LCE2DQ5TA82 110 aaPredicted RBP8.04□□□□□ -1.12
HDAC8-216ENST00000470998 TXNDC2Q86VQ3 553 aa8.04□□□□□ -1.12
HDAC8-216ENST00000470998 SCAF11Q99590 1463 aaKnown RBP8.04□□□□□ -1.12
HDAC8-216ENST00000470998 NOS1P29475 1434 aa8.03□□□□□ -1.12
HDAC8-216ENST00000470998 RPRD2Q5VT52 1461 aaKnown RBP8.03□□□□□ -1.12
HDAC8-216ENST00000470998 TMEM2Q9UHN6 1383 aa8.03□□□□□ -1.12
HDAC8-216ENST00000470998 EVI5O60447 810 aa8.03□□□□□ -1.12
HDAC8-216ENST00000470998 IDI1Q13907 227 aa8.03□□□□□ -1.12
HDAC8-216ENST00000470998 DISP3Q9P2K9 1392 aa8.02□□□□□ -1.13
HDAC8-216ENST00000470998 PSDA5PKW4 1024 aaPredicted RBP8.02□□□□□ -1.13
HDAC8-216ENST00000470998 LTKP29376 864 aa8.02□□□□□ -1.13
HDAC8-216ENST00000470998 HDGFP51858 240 aaKnown RBP8.02□□□□□ -1.13
HDAC8-216ENST00000470998 CEP152O94986 1710 aa8.01□□□□□ -1.13
HDAC8-216ENST00000470998 PPP1R15AO75807 674 aaPredicted RBP8.01□□□□□ -1.13
HDAC8-216ENST00000470998 VARS2Q5ST30 1063 aaKnown RBP8.01□□□□□ -1.13
HDAC8-216ENST00000470998 IQGAP1P46940 1657 aa8.01□□□□□ -1.13
HDAC8-216ENST00000470998 EFCAB6Q5THR3 1501 aa8□□□□□ -1.13
HDAC8-216ENST00000470998 KDM5AP29375 1690 aaKnown RBP8□□□□□ -1.13
HDAC8-216ENST00000470998 HS3ST6Q96QI5 342 aa8□□□□□ -1.13
HDAC8-216ENST00000470998 LHX6Q9UPM6 363 aa8□□□□□ -1.13
HDAC8-216ENST00000470998 UBR1Q8IWV7 1749 aa8□□□□□ -1.13
HDAC8-216ENST00000470998 LRRC7Q96NW7 1537 aa7.99□□□□□ -1.13
HDAC8-216ENST00000470998 SPDYE16A6NNV3 312 aaPredicted RBP7.99□□□□□ -1.13
HDAC8-216ENST00000470998 SYNMO15061 1565 aa7.99□□□□□ -1.13
HDAC8-216ENST00000470998 KCNA6P17658 529 aa7.99□□□□□ -1.13
HDAC8-216ENST00000470998 PPP4R3BQ5MIZ7 849 aa7.99□□□□□ -1.13
HDAC8-216ENST00000470998 KCNV2Q8TDN2 545 aa7.99□□□□□ -1.13
HDAC8-216ENST00000470998 ARHGEF1Q92888 912 aaKnown RBP7.99□□□□□ -1.13
HDAC8-216ENST00000470998 SLC24A1O60721 1099 aa7.98□□□□□ -1.13
HDAC8-216ENST00000470998 PIP4K2BP78356 416 aa7.98□□□□□ -1.13
HDAC8-216ENST00000470998 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.98□□□□□ -1.13
HDAC8-216ENST00000470998 MPHOSPH9Q99550 1183 aa7.98□□□□□ -1.13
HDAC8-216ENST00000470998 KDM2AQ9Y2K7 1162 aa7.98□□□□□ -1.13
HDAC8-216ENST00000470998 PIK3C2BO00750 1634 aa7.97□□□□□ -1.13
HDAC8-216ENST00000470998 PDIA6Q15084 440 aa7.97□□□□□ -1.13
HDAC8-216ENST00000470998 ZNF454Q8N9F8 522 aa7.97□□□□□ -1.13
HDAC8-216ENST00000470998 ADGRB3O60242 1522 aa7.97□□□□□ -1.13
HDAC8-216ENST00000470998 ANKRD30BQ9BXX2 1392 aa7.97□□□□□ -1.13
HDAC8-216ENST00000470998 HSPA1LP34931 641 aa7.96□□□□□ -1.14
HDAC8-216ENST00000470998 NEUROD1Q13562 356 aa7.96□□□□□ -1.14
HDAC8-216ENST00000470998 TRIM52Q96A61 297 aa7.96□□□□□ -1.14
HDAC8-216ENST00000470998 UNC13BO14795 1591 aa7.96□□□□□ -1.14
HDAC8-216ENST00000470998 PLEKHG1Q9ULL1 1385 aa7.96□□□□□ -1.14
HDAC8-216ENST00000470998 TET3O43151 1660 aa7.95□□□□□ -1.14
HDAC8-216ENST00000470998 SOCS7O14512 581 aa7.95□□□□□ -1.14
HDAC8-216ENST00000470998 SIN3AQ96ST3 1273 aa7.95□□□□□ -1.14
HDAC8-216ENST00000470998 TBX22Q9Y458 520 aa7.95□□□□□ -1.14
HDAC8-216ENST00000470998 ARIH1Q9Y4X5 557 aaPredicted RBP7.95□□□□□ -1.14
HDAC8-216ENST00000470998 NUP155O75694 1391 aa7.95□□□□□ -1.14
HDAC8-216ENST00000470998 ZFYVE9O95405 1425 aa7.95□□□□□ -1.14
HDAC8-216ENST00000470998 NCOA3Q9Y6Q9 1424 aa7.95□□□□□ -1.14
HDAC8-216ENST00000470998 ILDR2Q71H61 639 aa7.94□□□□□ -1.14
HDAC8-216ENST00000470998 CDAN1Q8IWY9 1227 aa7.94□□□□□ -1.14
HDAC8-216ENST00000470998 BCANQ96GW7 911 aa7.94□□□□□ -1.14
HDAC8-216ENST00000470998 SLC26A8Q96RN1 970 aa7.94□□□□□ -1.14
HDAC8-216ENST00000470998 TMEM94Q12767 1356 aa7.94□□□□□ -1.14
HDAC8-216ENST00000470998 PIK3R4Q99570 1358 aa7.94□□□□□ -1.14
HDAC8-216ENST00000470998 FAM135BQ49AJ0 1406 aa7.94□□□□□ -1.14
HDAC8-216ENST00000470998 RIMS2Q9UQ26 1411 aa7.94□□□□□ -1.14
HDAC8-216ENST00000470998 NKTRP30414 1462 aaKnown RBP7.94□□□□□ -1.14
HDAC8-216ENST00000470998 PROSER2Q86WR7 435 aaPredicted RBP7.93□□□□□ -1.14
HDAC8-216ENST00000470998 DDX12PQ92771 950 aa7.93□□□□□ -1.14
HDAC8-216ENST00000470998 ANO8Q9HCE9 1232 aaPredicted RBP7.93□□□□□ -1.14
HDAC8-216ENST00000470998 CFAP65Q6ZU64 1925 aaKnown RBP7.93□□□□□ -1.14
HDAC8-216ENST00000470998 IQGAP3Q86VI3 1631 aa7.92□□□□□ -1.14
HDAC8-216ENST00000470998 ALKQ9UM73 1620 aa7.92□□□□□ -1.14
HDAC8-216ENST00000470998 PCDH10Q9P2E7 1040 aa7.92□□□□□ -1.14
HDAC8-216ENST00000470998 GRXCR2A6NFK2 248 aa7.91□□□□□ -1.14
HDAC8-216ENST00000470998 FOSBP53539 338 aa7.91□□□□□ -1.14
HDAC8-216ENST00000470998 ZNF687Q8N1G0 1237 aa7.91□□□□□ -1.14
HDAC8-216ENST00000470998 ZDHHC16Q969W1 377 aa7.91□□□□□ -1.14
HDAC8-216ENST00000470998 MSH6P52701 1360 aa7.91□□□□□ -1.14
HDAC8-216ENST00000470998 NWD1Q149M9 1564 aa7.91□□□□□ -1.14
HDAC8-216ENST00000470998 STRCP1A6NGW2 1772 aa7.91□□□□□ -1.14
HDAC8-216ENST00000470998 TMEM131LA2VDJ0 1609 aa7.9□□□□□ -1.14
HDAC8-216ENST00000470998 CCER2I3L3R5 266 aa7.9□□□□□ -1.14
HDAC8-216ENST00000470998 PHF14O94880 888 aa7.9□□□□□ -1.14
HDAC8-216ENST00000470998 PBX2P40425 430 aa7.9□□□□□ -1.14
HDAC8-216ENST00000470998 NBR1Q14596 966 aa7.9□□□□□ -1.14
HDAC8-216ENST00000470998 TYW1BQ6NUM6 668 aa7.9□□□□□ -1.14
HDAC8-216ENST00000470998 FBXW7Q969H0 707 aa7.9□□□□□ -1.14
HDAC8-216ENST00000470998 EPAS1Q99814 870 aa7.9□□□□□ -1.14
HDAC8-216ENST00000470998 DIP2AQ14689 1571 aa7.89□□□□□ -1.15
HDAC8-216ENST00000470998 ADAMTS13Q76LX8 1427 aa7.89□□□□□ -1.15
HDAC8-216ENST00000470998 PTGER2P43116 358 aa7.89□□□□□ -1.15
HDAC8-216ENST00000470998 EIF4G2P78344 907 aaKnown RBP eCLIP7.89□□□□□ -1.15
HDAC8-216ENST00000470998 E9PCH4 1651 aa7.89□□□□□ -1.15
HDAC8-216ENST00000470998 MED1Q15648 1581 aaPredicted RBP7.88□□□□□ -1.15
HDAC8-216ENST00000470998 POTEB3A0JP26 581 aa7.88□□□□□ -1.15
HDAC8-216ENST00000470998 PTPREP23469 700 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms