RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 FOXO3O43524 673 aa13.14□□□□□ -0.31
CCM2-204ENST00000470837 NPHP3Q7Z494 1330 aa13.13□□□□□ -0.31
CCM2-204ENST00000470837 TOPAZ1Q8N9V7 1692 aa13.13□□□□□ -0.31
CCM2-204ENST00000470837 PPP2R1AP30153 589 aa13.13□□□□□ -0.31
CCM2-204ENST00000470837 NME9Q86XW9 330 aa13.13□□□□□ -0.31
CCM2-204ENST00000470837 CFAP53Q96M91 514 aa13.13□□□□□ -0.31
CCM2-204ENST00000470837 USP32Q8NFA0 1604 aa13.13□□□□□ -0.31
CCM2-204ENST00000470837 ABTB2Q8N961 1025 aa13.12□□□□□ -0.31
CCM2-204ENST00000470837 LMOD2Q6P5Q4 547 aa13.11□□□□□ -0.31
CCM2-204ENST00000470837 KRT28Q7Z3Y7 464 aa13.11□□□□□ -0.31
CCM2-204ENST00000470837 TOM1O60784 492 aa13.1□□□□□ -0.31
CCM2-204ENST00000470837 NLRP6P59044 892 aa13.1□□□□□ -0.31
CCM2-204ENST00000470837 XPCQ01831 940 aaPredicted RBP13.09□□□□□ -0.31
CCM2-204ENST00000470837 BRINP3Q76B58 766 aa13.09□□□□□ -0.31
CCM2-204ENST00000470837 SCAF1Q9H7N4 1312 aaKnown RBP13.09□□□□□ -0.31
CCM2-204ENST00000470837 KIF1AQ12756 1690 aa13.08□□□□□ -0.31
CCM2-204ENST00000470837 WDR43Q15061 677 aaKnown RBP eCLIP13.08□□□□□ -0.32
CCM2-204ENST00000470837 FAM9BQ8IZU0 186 aa13.08□□□□□ -0.32
CCM2-204ENST00000470837 YTHDC1Q96MU7 727 aaKnown RBP13.08□□□□□ -0.32
CCM2-204ENST00000470837 SSH2Q76I76 1423 aa13.07□□□□□ -0.32
CCM2-204ENST00000470837 LTBP4Q8N2S1 1624 aa13.07□□□□□ -0.32
CCM2-204ENST00000470837 PPM1GO15355 546 aaPredicted RBP13.07□□□□□ -0.32
CCM2-204ENST00000470837 MTHFSP49914 203 aa13.07□□□□□ -0.32
CCM2-204ENST00000470837 MON2Q7Z3U7 1717 aa13.07□□□□□ -0.32
CCM2-204ENST00000470837 NUTM2GQ5VZR2 741 aa13.06□□□□□ -0.32
CCM2-204ENST00000470837 ZRANB1Q9UGI0 708 aa13.06□□□□□ -0.32
CCM2-204ENST00000470837 AKAP12Q02952 1782 aa13.06□□□□□ -0.32
CCM2-204ENST00000470837 USP31Q70CQ4 1352 aa13.06□□□□□ -0.32
CCM2-204ENST00000470837 SOX12O15370 315 aa13.05□□□□□ -0.32
CCM2-204ENST00000470837 CCDC184Q52MB2 194 aa13.05□□□□□ -0.32
CCM2-204ENST00000470837 KCNH5Q8NCM2 988 aa13.05□□□□□ -0.32
CCM2-204ENST00000470837 NUDCQ9Y266 331 aa13.05□□□□□ -0.32
CCM2-204ENST00000470837 SBNO1A3KN83 1393 aa13.05□□□□□ -0.32
CCM2-204ENST00000470837 AATKQ6ZMQ8 1374 aa13.05□□□□□ -0.32
CCM2-204ENST00000470837 RGPD8O14715 1765 aaPredicted RBP13.04□□□□□ -0.32
CCM2-204ENST00000470837 UBAP1LF5GYI3 381 aa13.03□□□□□ -0.32
CCM2-204ENST00000470837 PNISRQ8TF01 805 aaKnown RBP13.03□□□□□ -0.32
CCM2-204ENST00000470837 DDX17Q92841 729 aaKnown RBP13.03□□□□□ -0.32
CCM2-204ENST00000470837 KIF20BQ96Q89 1820 aa13.03□□□□□ -0.32
CCM2-204ENST00000470837 ARHGEF10O15013 1369 aa13.03□□□□□ -0.32
CCM2-204ENST00000470837 OVOS2A0A0J9YW53 1432 aa13.03□□□□□ -0.32
CCM2-204ENST00000470837 OVOS2Q6IE36 1432 aa13.03□□□□□ -0.32
CCM2-204ENST00000470837 NRKQ7Z2Y5 1582 aa13.03□□□□□ -0.32
CCM2-204ENST00000470837 XIRP1Q702N8 1843 aaKnown RBP13.02□□□□□ -0.32
CCM2-204ENST00000470837 AMPHP49418 695 aa13.02□□□□□ -0.33
CCM2-204ENST00000470837 HAP1P54257 671 aaPredicted RBP13.02□□□□□ -0.33
CCM2-204ENST00000470837 POLKQ9UBT6 870 aa13.02□□□□□ -0.33
CCM2-204ENST00000470837 PLEKHG5O94827 1062 aa13.01□□□□□ -0.33
CCM2-204ENST00000470837 PIP4K2BP78356 416 aa13.01□□□□□ -0.33
CCM2-204ENST00000470837 RRS1Q15050 365 aaKnown RBP13.01□□□□□ -0.33
CCM2-204ENST00000470837 CERKQ8TCT0 537 aa13.01□□□□□ -0.33
CCM2-204ENST00000470837 TNS3Q68CZ2 1445 aa13.01□□□□□ -0.33
CCM2-204ENST00000470837 IQSEC2Q5JU85 1478 aa13□□□□□ -0.33
CCM2-204ENST00000470837 SOS2Q07890 1332 aaPredicted RBP13□□□□□ -0.33
CCM2-204ENST00000470837 SPATA31A3Q5VYP0 1347 aa13□□□□□ -0.33
CCM2-204ENST00000470837 DIAPH1O60610 1272 aaKnown RBP13□□□□□ -0.33
CCM2-204ENST00000470837 ZBTB7CA1YPR0 619 aa12.99□□□□□ -0.33
CCM2-204ENST00000470837 U2SURPO15042 1029 aaKnown RBP12.99□□□□□ -0.33
CCM2-204ENST00000470837 LRRC59Q96AG4 307 aaKnown RBP12.99□□□□□ -0.33
CCM2-204ENST00000470837 PNNQ9H307 717 aaKnown RBP12.99□□□□□ -0.33
CCM2-204ENST00000470837 EMILIN1Q9Y6C2 1016 aa12.99□□□□□ -0.33
CCM2-204ENST00000470837 ANKRD26Q9UPS8 1709 aa12.99□□□□□ -0.33
CCM2-204ENST00000470837 GCP02774 474 aa12.98□□□□□ -0.33
CCM2-204ENST00000470837 NEFMP07197 916 aa12.98□□□□□ -0.33
CCM2-204ENST00000470837 CENPBP07199 599 aaPredicted RBP12.98□□□□□ -0.33
CCM2-204ENST00000470837 HNRNPUQ00839 825 aaKnown RBP eCLIP12.98□□□□□ -0.33
CCM2-204ENST00000470837 PXDNQ92626 1479 aa12.97□□□□□ -0.33
CCM2-204ENST00000470837 MAP3K19Q56UN5 1328 aa12.97□□□□□ -0.33
CCM2-204ENST00000470837 U2AF1L5P0DN76 240 aaPredicted RBP12.97□□□□□ -0.33
CCM2-204ENST00000470837 FBLN1P23142 703 aa12.97□□□□□ -0.33
CCM2-204ENST00000470837 U2AF1Q01081 240 aaKnown RBP eCLIP12.97□□□□□ -0.33
CCM2-204ENST00000470837 FLT4P35916 1363 aa12.96□□□□□ -0.33
CCM2-204ENST00000470837 KIF24Q5T7B8 1368 aa12.96□□□□□ -0.33
CCM2-204ENST00000470837 PIK3C2AO00443 1686 aa12.96□□□□□ -0.33
CCM2-204ENST00000470837 USP19O94966 1318 aa12.96□□□□□ -0.33
CCM2-204ENST00000470837 ADAMTS8Q9UP79 889 aa12.96□□□□□ -0.33
CCM2-204ENST00000470837 CDK12Q9NYV4 1490 aaPredicted RBP12.96□□□□□ -0.34
CCM2-204ENST00000470837 INSRP06213 1382 aa12.95□□□□□ -0.34
CCM2-204ENST00000470837 SMG6Q86US8 1419 aaKnown RBP12.95□□□□□ -0.34
CCM2-204ENST00000470837 RTL1A6NKG5 1358 aa12.94□□□□□ -0.34
CCM2-204ENST00000470837 PNPLA6Q8IY17 1366 aa12.94□□□□□ -0.34
CCM2-204ENST00000470837 HOXC9P31274 260 aa12.93□□□□□ -0.34
CCM2-204ENST00000470837 ZC3H6P61129 1189 aaKnown RBP12.93□□□□□ -0.34
CCM2-204ENST00000470837 TRPM3Q9HCF6 1732 aaPredicted RBP12.93□□□□□ -0.34
CCM2-204ENST00000470837 ROBO1Q9Y6N7 1651 aa12.93□□□□□ -0.34
CCM2-204ENST00000470837 MAPK8IP3Q9UPT6 1336 aa12.92□□□□□ -0.34
CCM2-204ENST00000470837 HSP90AB2PQ58FF8 381 aa12.92□□□□□ -0.34
CCM2-204ENST00000470837 CABLES1Q8TDN4 633 aa12.92□□□□□ -0.34
CCM2-204ENST00000470837 IP6K1Q92551 441 aa12.92□□□□□ -0.34
CCM2-204ENST00000470837 IL13P35225 146 aa12.91□□□□□ -0.34
CCM2-204ENST00000470837 ARHGEF25Q86VW2 580 aa12.91□□□□□ -0.34
CCM2-204ENST00000470837 AHDC1Q5TGY3 1603 aaPredicted RBP12.91□□□□□ -0.34
CCM2-204ENST00000470837 USP54Q70EL1 1684 aa12.9□□□□□ -0.34
CCM2-204ENST00000470837 SLIT3O75094 1523 aa12.9□□□□□ -0.34
CCM2-204ENST00000470837 FCHSD2O94868 740 aa12.9□□□□□ -0.34
CCM2-204ENST00000470837 EIF4A2Q14240 407 aaKnown RBP12.9□□□□□ -0.34
CCM2-204ENST00000470837 CCDC146Q8IYE0 955 aa12.9□□□□□ -0.34
CCM2-204ENST00000470837 RUNDC1Q96C34 613 aa12.9□□□□□ -0.34
CCM2-204ENST00000470837 LTV1Q96GA3 475 aaPredicted RBP12.9□□□□□ -0.34
CCM2-204ENST00000470837 PRDM11Q9NQV5 511 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms