RNA–Protein interactions for RNA: ENST00000470815.1

HERC3-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-208ENST00000470815 BAP1Q92560 729 aa8.07□□□□□ -1.12
HERC3-208ENST00000470815 LINC01559Q495D7 138 aa8.06□□□□□ -1.12
HERC3-208ENST00000470815 TLL2Q9Y6L7 1015 aa8.06□□□□□ -1.12
HERC3-208ENST00000470815 NNTQ13423 1086 aa8.04□□□□□ -1.12
HERC3-208ENST00000470815 RSBN1LQ6PCB5 846 aaPredicted RBP8.04□□□□□ -1.12
HERC3-208ENST00000470815 IRF7Q92985 503 aa8.04□□□□□ -1.12
HERC3-208ENST00000470815 BEGAINQ9BUH8 593 aa8.04□□□□□ -1.12
HERC3-208ENST00000470815 H3BM21 787 aa8.03□□□□□ -1.12
HERC3-208ENST00000470815 LYPD8Q6UX82 237 aa8.03□□□□□ -1.12
HERC3-208ENST00000470815 FAM181BA6NEQ2 426 aa8.02□□□□□ -1.13
HERC3-208ENST00000470815 ADH1CP00326 375 aa8.02□□□□□ -1.13
HERC3-208ENST00000470815 ZFP42Q96MM3 310 aa8.02□□□□□ -1.13
HERC3-208ENST00000470815 TBC1D2Q9BYX2 928 aa8.02□□□□□ -1.13
HERC3-208ENST00000470815 SPTLC1O15269 473 aa8.01□□□□□ -1.13
HERC3-208ENST00000470815 TIMP2P16035 220 aa8.01□□□□□ -1.13
HERC3-208ENST00000470815 GMPRP36959 345 aa8.01□□□□□ -1.13
HERC3-208ENST00000470815 MRPL14Q6P1L8 145 aaKnown RBP8.01□□□□□ -1.13
HERC3-208ENST00000470815 FAM174AQ8TBP5 190 aa8.01□□□□□ -1.13
HERC3-208ENST00000470815 F12P00748 615 aaPredicted RBP8□□□□□ -1.13
HERC3-208ENST00000470815 PRPF38BQ5VTL8 546 aaKnown RBP8□□□□□ -1.13
HERC3-208ENST00000470815 CDK15Q96Q40 435 aa8□□□□□ -1.13
HERC3-208ENST00000470815 KLF16Q9BXK1 252 aaPredicted RBP8□□□□□ -1.13
HERC3-208ENST00000470815 ZBTB3Q9H5J0 574 aa8□□□□□ -1.13
HERC3-208ENST00000470815 CFAP99D6REC4 459 aa7.99□□□□□ -1.13
HERC3-208ENST00000470815 CTHP32929 405 aa7.99□□□□□ -1.13
HERC3-208ENST00000470815 SCARF1Q14162 830 aa7.99□□□□□ -1.13
HERC3-208ENST00000470815 PARP9Q8IXQ6 854 aa7.99□□□□□ -1.13
HERC3-208ENST00000470815 LORP23490 312 aaPredicted RBP7.98□□□□□ -1.13
HERC3-208ENST00000470815 WDR4P57081 412 aaKnown RBP7.98□□□□□ -1.13
HERC3-208ENST00000470815 TPRNQ4KMQ1 711 aa7.98□□□□□ -1.13
HERC3-208ENST00000470815 PCDHB15Q9Y5E8 787 aa7.98□□□□□ -1.13
HERC3-208ENST00000470815 HRCP23327 699 aa7.97□□□□□ -1.13
HERC3-208ENST00000470815 ZSCAN1Q8NBB4 408 aa7.97□□□□□ -1.13
HERC3-208ENST00000470815 MAP10Q9P2G4 905 aa7.97□□□□□ -1.13
HERC3-208ENST00000470815 TRIM66O15016 1216 aa7.96□□□□□ -1.14
HERC3-208ENST00000470815 NR5A1Q13285 461 aa7.96□□□□□ -1.14
HERC3-208ENST00000470815 FOXJ1Q92949 421 aa7.96□□□□□ -1.14
HERC3-208ENST00000470815 ERBB4Q15303 1308 aa7.96□□□□□ -1.14
HERC3-208ENST00000470815 VSIG8P0DPA2 414 aa7.95□□□□□ -1.14
HERC3-208ENST00000470815 VEGFBP49765 207 aa7.95□□□□□ -1.14
HERC3-208ENST00000470815 TUSC1Q2TAM9 212 aa7.95□□□□□ -1.14
HERC3-208ENST00000470815 RIC3Q7Z5B4 369 aa7.95□□□□□ -1.14
HERC3-208ENST00000470815 AK7Q96M32 723 aa7.95□□□□□ -1.14
HERC3-208ENST00000470815 PURBQ96QR8 312 aaKnown RBP7.95□□□□□ -1.14
HERC3-208ENST00000470815 BPHLQ86WA6 291 aaPredicted RBP7.94□□□□□ -1.14
HERC3-208ENST00000470815 ZIC2O95409 532 aaPredicted RBP7.93□□□□□ -1.14
HERC3-208ENST00000470815 ARMC2Q8NEN0 867 aa7.93□□□□□ -1.14
HERC3-208ENST00000470815 C4orf48Q5BLP8 95 aa7.92□□□□□ -1.14
HERC3-208ENST00000470815 CABLES1Q8TDN4 633 aa7.92□□□□□ -1.14
HERC3-208ENST00000470815 ITPKCQ96DU7 683 aa7.92□□□□□ -1.14
HERC3-208ENST00000470815 C1QTNF2Q9BXJ5 285 aa7.92□□□□□ -1.14
HERC3-208ENST00000470815 SLC24A3Q9HC58 644 aa7.92□□□□□ -1.14
HERC3-208ENST00000470815 PER1O15534 1290 aaPredicted RBP7.91□□□□□ -1.14
HERC3-208ENST00000470815 NR3C2P08235 984 aa7.91□□□□□ -1.14
HERC3-208ENST00000470815 GRM5P41594 1212 aa7.91□□□□□ -1.14
HERC3-208ENST00000470815 ARID5BQ14865 1188 aa7.91□□□□□ -1.14
HERC3-208ENST00000470815 ZFAND3Q9H8U3 227 aa7.91□□□□□ -1.14
HERC3-208ENST00000470815 MAP4K5Q9Y4K4 846 aa7.91□□□□□ -1.14
HERC3-208ENST00000470815 AGERQ15109 404 aa7.9□□□□□ -1.14
HERC3-208ENST00000470815 NBPF14Q5TI25 921 aa7.9□□□□□ -1.14
HERC3-208ENST00000470815 SH3RF1Q7Z6J0 888 aa7.9□□□□□ -1.14
HERC3-208ENST00000470815 MEIOBQ8N635 442 aa7.9□□□□□ -1.14
HERC3-208ENST00000470815 LILRB3O75022 631 aa7.89□□□□□ -1.15
HERC3-208ENST00000470815 PRKCSHP14314 528 aaPredicted RBP7.89□□□□□ -1.15
HERC3-208ENST00000470815 MYSM1Q5VVJ2 828 aa7.89□□□□□ -1.15
HERC3-208ENST00000470815 TRMT44Q8IYL2 757 aaKnown RBP7.89□□□□□ -1.15
HERC3-208ENST00000470815 LIMD1Q9UGP4 676 aa7.89□□□□□ -1.15
HERC3-208ENST00000470815 SOBPA7XYQ1 873 aa7.88□□□□□ -1.15
HERC3-208ENST00000470815 MAN1A2O60476 641 aa7.88□□□□□ -1.15
HERC3-208ENST00000470815 UPP2O95045 317 aa7.88□□□□□ -1.15
HERC3-208ENST00000470815 CSPP1Q1MSJ5 1256 aa7.88□□□□□ -1.15
HERC3-208ENST00000470815 LINC00528Q8N1L1 170 aa7.88□□□□□ -1.15
HERC3-208ENST00000470815 QPCTQ16769 361 aa7.87□□□□□ -1.15
HERC3-208ENST00000470815 SH3BP5LQ7L8J4 393 aa7.87□□□□□ -1.15
HERC3-208ENST00000470815 HELBQ8NG08 1087 aaPredicted RBP7.87□□□□□ -1.15
HERC3-208ENST00000470815 GPKOWQ92917 476 aaPredicted RBP eCLIP7.87□□□□□ -1.15
HERC3-208ENST00000470815 NUTM2BA6NNL0 878 aaPredicted RBP7.86□□□□□ -1.15
HERC3-208ENST00000470815 NUTM2EB1AL46 878 aaPredicted RBP7.86□□□□□ -1.15
HERC3-208ENST00000470815 PDE4DQ08499 809 aa7.86□□□□□ -1.15
HERC3-208ENST00000470815 C6orf118Q5T5N4 469 aa7.86□□□□□ -1.15
HERC3-208ENST00000470815 NUTM2DQ5VT03 806 aaPredicted RBP7.86□□□□□ -1.15
HERC3-208ENST00000470815 NUTM2AQ8IVF1 878 aaPredicted RBP7.86□□□□□ -1.15
HERC3-208ENST00000470815 TSC1Q92574 1164 aa7.86□□□□□ -1.15
HERC3-208ENST00000470815 SOS2Q07890 1332 aaPredicted RBP7.85□□□□□ -1.15
HERC3-208ENST00000470815 BMP2P12643 396 aa7.85□□□□□ -1.15
HERC3-208ENST00000470815 FSHRP23945 695 aa7.85□□□□□ -1.15
HERC3-208ENST00000470815 EMILIN1Q9Y6C2 1016 aa7.85□□□□□ -1.15
HERC3-208ENST00000470815 PPFIA3O75145 1194 aa7.84□□□□□ -1.15
HERC3-208ENST00000470815 TSEN34Q9BSV6 310 aaKnown RBP7.84□□□□□ -1.15
HERC3-208ENST00000470815 CLK2P49760 499 aaKnown RBP7.83□□□□□ -1.16
HERC3-208ENST00000470815 VASH1Q7L8A9 365 aaPredicted RBP7.83□□□□□ -1.16
HERC3-208ENST00000470815 CCDC116Q8IYX3 515 aa7.83□□□□□ -1.16
HERC3-208ENST00000470815 RTL5Q5HYW3 569 aaPredicted RBP7.82□□□□□ -1.16
HERC3-208ENST00000470815 DNMT3LQ9UJW3 386 aa7.82□□□□□ -1.16
HERC3-208ENST00000470815 RSPH6AQ9H0K4 717 aa7.81□□□□□ -1.16
HERC3-208ENST00000470815 MAGEB6P1A0A0J9YX57 407 aa7.8□□□□□ -1.16
HERC3-208ENST00000470815 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.8□□□□□ -1.16
HERC3-208ENST00000470815 ERFEQ4G0M1 354 aa7.8□□□□□ -1.16
HERC3-208ENST00000470815 CDV3Q9UKY7 258 aaKnown RBP7.79□□□□□ -1.16
HERC3-208ENST00000470815 TTLL8A6PVC2 850 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms