RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 NUTM2DQ5VT03 806 aaPredicted RBP9.12□□□□□ -0.95
COL9A1-206ENST00000470652 NUTM2AQ8IVF1 878 aaPredicted RBP9.12□□□□□ -0.95
COL9A1-206ENST00000470652 HPS1Q92902 700 aa9.12□□□□□ -0.95
COL9A1-206ENST00000470652 LILRB3O75022 631 aa9.11□□□□□ -0.95
COL9A1-206ENST00000470652 QPCTQ16769 361 aa9.11□□□□□ -0.95
COL9A1-206ENST00000470652 PRR7Q8TB68 274 aa9.11□□□□□ -0.95
COL9A1-206ENST00000470652 SENP2Q9HC62 589 aa9.11□□□□□ -0.95
COL9A1-206ENST00000470652 JUNDP17535 347 aa9.1□□□□□ -0.95
COL9A1-206ENST00000470652 RC3H1Q5TC82 1133 aaKnown RBP9.1□□□□□ -0.95
COL9A1-206ENST00000470652 DESI1Q6ICB0 168 aa9.1□□□□□ -0.95
COL9A1-206ENST00000470652 PROCA1Q8NCQ7 364 aaPredicted RBP9.1□□□□□ -0.95
COL9A1-206ENST00000470652 CABLES1Q8TDN4 633 aa9.1□□□□□ -0.95
COL9A1-206ENST00000470652 PCMTD1Q96MG8 357 aaPredicted RBP9.1□□□□□ -0.95
COL9A1-206ENST00000470652 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.1□□□□□ -0.95
COL9A1-206ENST00000470652 TRIM47Q96LD4 638 aa9.09□□□□□ -0.95
COL9A1-206ENST00000470652 TERTO14746 1132 aaKnown RBP9.08□□□□□ -0.96
COL9A1-206ENST00000470652 WIPF1O43516 503 aa9.08□□□□□ -0.96
COL9A1-206ENST00000470652 INSM1Q01101 510 aaPredicted RBP9.08□□□□□ -0.96
COL9A1-206ENST00000470652 STK17AQ9UEE5 414 aa9.08□□□□□ -0.96
COL9A1-206ENST00000470652 CFAP99D6REC4 459 aa9.07□□□□□ -0.96
COL9A1-206ENST00000470652 SKOR1P84550 965 aa9.07□□□□□ -0.96
COL9A1-206ENST00000470652 ALDH1A1P00352 501 aa9.06□□□□□ -0.96
COL9A1-206ENST00000470652 WNT7BP56706 349 aa9.06□□□□□ -0.96
COL9A1-206ENST00000470652 RTL5Q5HYW3 569 aaPredicted RBP9.06□□□□□ -0.96
COL9A1-206ENST00000470652 PPP2R2DQ66LE6 453 aa9.06□□□□□ -0.96
COL9A1-206ENST00000470652 HELBQ8NG08 1087 aaPredicted RBP9.05□□□□□ -0.96
COL9A1-206ENST00000470652 KIFC2Q96AC6 838 aa9.05□□□□□ -0.96
COL9A1-206ENST00000470652 PTPRNQ16849 979 aa9.04□□□□□ -0.96
COL9A1-206ENST00000470652 LCE2CQ5TA81 110 aa9.04□□□□□ -0.96
COL9A1-206ENST00000470652 NUDT12Q9BQG2 462 aa9.04□□□□□ -0.96
COL9A1-206ENST00000470652 CCNYL3P0C7X3 344 aa9.03□□□□□ -0.96
COL9A1-206ENST00000470652 LYPD8Q6UX82 237 aa9.03□□□□□ -0.96
COL9A1-206ENST00000470652 TSC1Q92574 1164 aa9.03□□□□□ -0.96
COL9A1-206ENST00000470652 PTCRAQ6ISU1 281 aaPredicted RBP9.01□□□□□ -0.97
COL9A1-206ENST00000470652 EVA1BQ9NVM1 165 aa9.01□□□□□ -0.97
COL9A1-206ENST00000470652 FBXO31Q5XUX0 539 aaPredicted RBP9□□□□□ -0.97
COL9A1-206ENST00000470652 RFC5P40937 340 aa8.99□□□□□ -0.97
COL9A1-206ENST00000470652 EHBP1Q8NDI1 1231 aa8.99□□□□□ -0.97
COL9A1-206ENST00000470652 SLC16A10Q8TF71 515 aa8.99□□□□□ -0.97
COL9A1-206ENST00000470652 SIAH2O43255 324 aa8.98□□□□□ -0.97
COL9A1-206ENST00000470652 KCNH2Q12809 1159 aa8.98□□□□□ -0.97
COL9A1-206ENST00000470652 TMEM259Q4ZIN3 620 aa8.98□□□□□ -0.97
COL9A1-206ENST00000470652 WASF2Q9Y6W5 498 aa8.98□□□□□ -0.97
COL9A1-206ENST00000470652 PER1O15534 1290 aaPredicted RBP8.97□□□□□ -0.97
COL9A1-206ENST00000470652 AP1G2O75843 785 aa8.97□□□□□ -0.97
COL9A1-206ENST00000470652 CTDSPL2Q05D32 466 aa8.97□□□□□ -0.97
COL9A1-206ENST00000470652 CAPN5O15484 640 aaPredicted RBP8.96□□□□□ -0.98
COL9A1-206ENST00000470652 BMP1P13497 986 aa8.96□□□□□ -0.98
COL9A1-206ENST00000470652 CTHP32929 405 aa8.96□□□□□ -0.98
COL9A1-206ENST00000470652 NXF1Q9UBU9 619 aaKnown RBP8.96□□□□□ -0.98
COL9A1-206ENST00000470652 F12P00748 615 aaPredicted RBP8.95□□□□□ -0.98
COL9A1-206ENST00000470652 TMEM132AQ24JP5 1023 aa8.95□□□□□ -0.98
COL9A1-206ENST00000470652 UNC93B1Q9H1C4 597 aa8.95□□□□□ -0.98
COL9A1-206ENST00000470652 SH3BP2P78314 561 aa8.94□□□□□ -0.98
COL9A1-206ENST00000470652 TRIM46Q7Z4K8 759 aa8.94□□□□□ -0.98
COL9A1-206ENST00000470652 MAP10Q9P2G4 905 aa8.93□□□□□ -0.98
COL9A1-206ENST00000470652 GMPRP36959 345 aa8.92□□□□□ -0.98
COL9A1-206ENST00000470652 VEGFBP49765 207 aa8.92□□□□□ -0.98
COL9A1-206ENST00000470652 FAM181BA6NEQ2 426 aa8.91□□□□□ -0.98
COL9A1-206ENST00000470652 USP17L8P0C7I0 530 aa8.91□□□□□ -0.98
COL9A1-206ENST00000470652 BANK1Q8NDB2 785 aa8.91□□□□□ -0.98
COL9A1-206ENST00000470652 LRRN4Q8WUT4 740 aa8.91□□□□□ -0.98
COL9A1-206ENST00000470652 LINC01559Q495D7 138 aa8.9□□□□□ -0.98
COL9A1-206ENST00000470652 ARMC2Q8NEN0 867 aa8.9□□□□□ -0.98
COL9A1-206ENST00000470652 BAP1Q92560 729 aa8.9□□□□□ -0.98
COL9A1-206ENST00000470652 IRF7Q92985 503 aa8.9□□□□□ -0.98
COL9A1-206ENST00000470652 NPAS3Q8IXF0 933 aa8.88□□□□□ -0.99
COL9A1-206ENST00000470652 ZFP42Q96MM3 310 aa8.88□□□□□ -0.99
COL9A1-206ENST00000470652 ZNF511Q8NB15 262 aa8.87□□□□□ -0.99
COL9A1-206ENST00000470652 ZSCAN1Q8NBB4 408 aa8.87□□□□□ -0.99
COL9A1-206ENST00000470652 NR6A1Q15406 480 aa8.86□□□□□ -0.99
COL9A1-206ENST00000470652 TLL2Q9Y6L7 1015 aa8.86□□□□□ -0.99
COL9A1-206ENST00000470652 H3BM21 787 aa8.85□□□□□ -0.99
COL9A1-206ENST00000470652 SOCS7O14512 581 aa8.85□□□□□ -0.99
COL9A1-206ENST00000470652 NBPF14Q5TI25 921 aa8.85□□□□□ -0.99
COL9A1-206ENST00000470652 PNMA1Q8ND90 353 aa8.85□□□□□ -0.99
COL9A1-206ENST00000470652 GPKOWQ92917 476 aaPredicted RBP eCLIP8.85□□□□□ -0.99
COL9A1-206ENST00000470652 HMX1Q9NP08 348 aaPredicted RBP8.85□□□□□ -0.99
COL9A1-206ENST00000470652 FKBPLQ9UIM3 349 aa8.85□□□□□ -0.99
COL9A1-206ENST00000470652 VARSP26640 1264 aaKnown RBP8.84□□□□□ -0.99
COL9A1-206ENST00000470652 NNTQ13423 1086 aa8.84□□□□□ -0.99
COL9A1-206ENST00000470652 ERBB4Q15303 1308 aa8.83□□□□□ -1
COL9A1-206ENST00000470652 APBB1O00213 710 aa8.83□□□□□ -1
COL9A1-206ENST00000470652 LORP23490 312 aaPredicted RBP8.83□□□□□ -1
COL9A1-206ENST00000470652 SCARF1Q14162 830 aa8.83□□□□□ -1
COL9A1-206ENST00000470652 BPHLQ86WA6 291 aaPredicted RBP8.83□□□□□ -1
COL9A1-206ENST00000470652 ZC3H4Q9UPT8 1303 aaKnown RBP8.82□□□□□ -1
COL9A1-206ENST00000470652 AGERQ15109 404 aa8.82□□□□□ -1
COL9A1-206ENST00000470652 EPS8L1Q8TE68 723 aa8.82□□□□□ -1
COL9A1-206ENST00000470652 PURBQ96QR8 312 aaKnown RBP8.82□□□□□ -1
COL9A1-206ENST00000470652 WDR4P57081 412 aaKnown RBP8.81□□□□□ -1
COL9A1-206ENST00000470652 MRPL14Q6P1L8 145 aaKnown RBP8.81□□□□□ -1
COL9A1-206ENST00000470652 PDXDC2PQ6P474 469 aa8.81□□□□□ -1
COL9A1-206ENST00000470652 MPNDQ8N594 471 aa8.81□□□□□ -1
COL9A1-206ENST00000470652 MTMR14Q8NCE2 650 aa8.81□□□□□ -1
COL9A1-206ENST00000470652 GJD4Q96KN9 370 aaPredicted RBP8.81□□□□□ -1
COL9A1-206ENST00000470652 TRIM34Q9BYJ4 488 aa8.81□□□□□ -1
COL9A1-206ENST00000470652 SNRKQ9NRH2 765 aa8.81□□□□□ -1
COL9A1-206ENST00000470652 FOXJ1Q92949 421 aa8.8□□□□□ -1
COL9A1-206ENST00000470652 SOBPA7XYQ1 873 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms