RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 AKAP12Q02952 1782 aa14.57□□□□□ -0.08
SND1-208ENST00000470463 MTHFSP49914 203 aa14.57□□□□□ -0.08
SND1-208ENST00000470463 NCBP3Q53F19 620 aaKnown RBP14.57□□□□□ -0.08
SND1-208ENST00000470463 PRR36Q9H6K5 1346 aa14.57□□□□□ -0.08
SND1-208ENST00000470463 NWD1Q149M9 1564 aa14.56□□□□□ -0.08
SND1-208ENST00000470463 MED1Q15648 1581 aaPredicted RBP14.56□□□□□ -0.08
SND1-208ENST00000470463 COG3Q96JB2 828 aa14.56□□□□□ -0.08
SND1-208ENST00000470463 PNNQ9H307 717 aaKnown RBP14.56□□□□□ -0.08
SND1-208ENST00000470463 GGNBP2Q9H3C7 697 aa14.56□□□□□ -0.08
SND1-208ENST00000470463 TTC21AQ8NDW8 1320 aa14.56□□□□□ -0.08
SND1-208ENST00000470463 AATKQ6ZMQ8 1374 aa14.56□□□□□ -0.08
SND1-208ENST00000470463 NKTRP30414 1462 aaKnown RBP14.56□□□□□ -0.08
SND1-208ENST00000470463 NCOA3Q9Y6Q9 1424 aa14.55□□□□□ -0.08
SND1-208ENST00000470463 ERICH6BQ5W0A0 696 aa14.54□□□□□ -0.08
SND1-208ENST00000470463 ACEP12821 1306 aa14.54□□□□□ -0.08
SND1-208ENST00000470463 USP6P35125 1406 aa14.54□□□□□ -0.08
SND1-208ENST00000470463 ADGRL3Q9HAR2 1447 aa14.54□□□□□ -0.08
SND1-208ENST00000470463 TNNT2P45379 298 aaPredicted RBP14.53□□□□□ -0.08
SND1-208ENST00000470463 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.53□□□□□ -0.08
SND1-208ENST00000470463 FMN2Q9NZ56 1722 aa14.52□□□□□ -0.08
SND1-208ENST00000470463 PNPLA6Q8IY17 1366 aa14.52□□□□□ -0.08
SND1-208ENST00000470463 TTC21BQ7Z4L5 1316 aa14.51□□□□□ -0.09
SND1-208ENST00000470463 NGDNQ8NEJ9 315 aaKnown RBP14.51□□□□□ -0.09
SND1-208ENST00000470463 RUNDC1Q96C34 613 aa14.5□□□□□ -0.09
SND1-208ENST00000470463 NRKQ7Z2Y5 1582 aa14.5□□□□□ -0.09
SND1-208ENST00000470463 SSH2Q76I76 1423 aa14.49□□□□□ -0.09
SND1-208ENST00000470463 SHPRHQ149N8 1683 aa14.49□□□□□ -0.09
SND1-208ENST00000470463 DIAPH1O60610 1272 aaKnown RBP14.48□□□□□ -0.09
SND1-208ENST00000470463 USP31Q70CQ4 1352 aa14.47□□□□□ -0.09
SND1-208ENST00000470463 NALCNQ8IZF0 1738 aa14.47□□□□□ -0.09
SND1-208ENST00000470463 CDK12Q9NYV4 1490 aaPredicted RBP14.47□□□□□ -0.09
SND1-208ENST00000470463 NEFMP07197 916 aa14.47□□□□□ -0.09
SND1-208ENST00000470463 C14orf37Q86TY3 774 aa14.47□□□□□ -0.09
SND1-208ENST00000470463 PROSER2Q86WR7 435 aaPredicted RBP14.47□□□□□ -0.09
SND1-208ENST00000470463 NME9Q86XW9 330 aa14.47□□□□□ -0.09
SND1-208ENST00000470463 RGS17Q9UGC6 210 aaPredicted RBP14.47□□□□□ -0.09
SND1-208ENST00000470463 DCCP43146 1447 aa14.47□□□□□ -0.09
SND1-208ENST00000470463 LRRC7Q96NW7 1537 aa14.46□□□□□ -0.09
SND1-208ENST00000470463 U2AF1L5P0DN76 240 aaPredicted RBP14.46□□□□□ -0.09
SND1-208ENST00000470463 U2AF1Q01081 240 aaKnown RBP eCLIP14.46□□□□□ -0.09
SND1-208ENST00000470463 GOLGA2Q08379 1002 aa14.46□□□□□ -0.09
SND1-208ENST00000470463 C19orf44Q9H6X5 657 aa14.46□□□□□ -0.09
SND1-208ENST00000470463 POLKQ9UBT6 870 aa14.46□□□□□ -0.09
SND1-208ENST00000470463 SUPT16HQ9Y5B9 1047 aaKnown RBP14.46□□□□□ -0.09
SND1-208ENST00000470463 OVOS2A0A0J9YW53 1432 aa14.46□□□□□ -0.09
SND1-208ENST00000470463 OVOS2Q6IE36 1432 aa14.46□□□□□ -0.09
SND1-208ENST00000470463 COL3A1P02461 1466 aaPredicted RBP14.45□□□□□ -0.1
SND1-208ENST00000470463 NUTM2FA1L443 756 aa14.45□□□□□ -0.1
SND1-208ENST00000470463 CCDC27Q2M243 656 aa14.45□□□□□ -0.1
SND1-208ENST00000470463 PHF8Q9UPP1 1060 aa14.45□□□□□ -0.1
SND1-208ENST00000470463 ZNF521Q96K83 1311 aa14.44□□□□□ -0.1
SND1-208ENST00000470463 APAF1O14727 1248 aa14.44□□□□□ -0.1
SND1-208ENST00000470463 FCHSD2O94868 740 aa14.44□□□□□ -0.1
SND1-208ENST00000470463 PELP1Q8IZL8 1130 aaKnown RBP14.44□□□□□ -0.1
SND1-208ENST00000470463 KIF24Q5T7B8 1368 aa14.44□□□□□ -0.1
SND1-208ENST00000470463 E9PSI1 815 aa14.43□□□□□ -0.1
SND1-208ENST00000470463 FKBP8Q14318 412 aa14.43□□□□□ -0.1
SND1-208ENST00000470463 PMFBP1Q8TBY8 1022 aa14.43□□□□□ -0.1
SND1-208ENST00000470463 MAPK8IP3Q9UPT6 1336 aa14.42□□□□□ -0.1
SND1-208ENST00000470463 MAP2P11137 1827 aaKnown RBP14.42□□□□□ -0.1
SND1-208ENST00000470463 RNF123Q5XPI4 1314 aa14.41□□□□□ -0.1
SND1-208ENST00000470463 U2SURPO15042 1029 aaKnown RBP14.41□□□□□ -0.1
SND1-208ENST00000470463 WDR63Q8IWG1 891 aa14.41□□□□□ -0.1
SND1-208ENST00000470463 CCDC146Q8IYE0 955 aa14.41□□□□□ -0.1
SND1-208ENST00000470463 TCP11L2Q8N4U5 519 aa14.41□□□□□ -0.1
SND1-208ENST00000470463 SALL2Q9Y467 1007 aaPredicted RBP14.41□□□□□ -0.1
SND1-208ENST00000470463 USP54Q70EL1 1684 aa14.41□□□□□ -0.1
SND1-208ENST00000470463 RGPD8O14715 1765 aaPredicted RBP14.4□□□□□ -0.1
SND1-208ENST00000470463 KIF1AQ12756 1690 aa14.4□□□□□ -0.1
SND1-208ENST00000470463 ATF3P18847 181 aa14.4□□□□□ -0.1
SND1-208ENST00000470463 ESCO1Q5FWF5 840 aa14.4□□□□□ -0.1
SND1-208ENST00000470463 PPM1GO15355 546 aaPredicted RBP14.39□□□□□ -0.11
SND1-208ENST00000470463 PSME1Q06323 249 aa14.39□□□□□ -0.11
SND1-208ENST00000470463 POTEAQ6S8J7 498 aa14.39□□□□□ -0.11
SND1-208ENST00000470463 CADPS2Q86UW7 1296 aa14.39□□□□□ -0.11
SND1-208ENST00000470463 RCAN3Q9UKA8 241 aa14.39□□□□□ -0.11
SND1-208ENST00000470463 SLFN5Q08AF3 891 aa14.38□□□□□ -0.11
SND1-208ENST00000470463 WWC1Q8IX03 1113 aa14.38□□□□□ -0.11
SND1-208ENST00000470463 SBNO1A3KN83 1393 aa14.37□□□□□ -0.11
SND1-208ENST00000470463 TMEM94Q12767 1356 aa14.37□□□□□ -0.11
SND1-208ENST00000470463 IL13P35225 146 aa14.37□□□□□ -0.11
SND1-208ENST00000470463 NLRP6P59044 892 aa14.37□□□□□ -0.11
SND1-208ENST00000470463 TRMT2AQ8IZ69 625 aaKnown RBP14.37□□□□□ -0.11
SND1-208ENST00000470463 ABTB2Q8N961 1025 aa14.37□□□□□ -0.11
SND1-208ENST00000470463 KCNH5Q8NCM2 988 aa14.37□□□□□ -0.11
SND1-208ENST00000470463 PLEKHF1Q96S99 279 aa14.37□□□□□ -0.11
SND1-208ENST00000470463 EMILIN1Q9Y6C2 1016 aa14.37□□□□□ -0.11
SND1-208ENST00000470463 FLT4P35916 1363 aa14.36□□□□□ -0.11
SND1-208ENST00000470463 MSH6P52701 1360 aa14.36□□□□□ -0.11
SND1-208ENST00000470463 DUSP27Q5VZP5 1158 aa14.36□□□□□ -0.11
SND1-208ENST00000470463 ZRANB1Q9UGI0 708 aa14.36□□□□□ -0.11
SND1-208ENST00000470463 C1orf167Q5SNV9 1468 aa14.36□□□□□ -0.11
SND1-208ENST00000470463 PIK3C2AO00443 1686 aa14.36□□□□□ -0.11
SND1-208ENST00000470463 RTL1A6NKG5 1358 aa14.35□□□□□ -0.11
SND1-208ENST00000470463 CALD1Q05682 793 aaKnown RBP14.35□□□□□ -0.11
SND1-208ENST00000470463 LMOD3Q0VAK6 560 aa14.35□□□□□ -0.11
SND1-208ENST00000470463 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.35□□□□□ -0.11
SND1-208ENST00000470463 MYH16Q9H6N6 1097 aa14.35□□□□□ -0.11
SND1-208ENST00000470463 IL16Q14005 1332 aa14.35□□□□□ -0.11
SND1-208ENST00000470463 PAK3O75914 559 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms