RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 NUTM2GQ5VZR2 741 aa7.42□□□□□ -1.22
CCDC144A-212ENST00000470068 DPY19L2Q6NUT2 758 aa7.42□□□□□ -1.22
CCDC144A-212ENST00000470068 TAF3Q5VWG9 929 aa7.42□□□□□ -1.22
CCDC144A-212ENST00000470068 ARHGAP27Q6ZUM4 889 aa7.42□□□□□ -1.22
CCDC144A-212ENST00000470068 ITPRIPQ8IWB1 547 aa7.42□□□□□ -1.22
CCDC144A-212ENST00000470068 WDR63Q8IWG1 891 aa7.42□□□□□ -1.22
CCDC144A-212ENST00000470068 CWC15Q9P013 229 aaKnown RBP7.42□□□□□ -1.22
CCDC144A-212ENST00000470068 ANKRD50Q9ULJ7 1429 aa7.41□□□□□ -1.22
CCDC144A-212ENST00000470068 DCTN1Q14203 1278 aa7.41□□□□□ -1.22
CCDC144A-212ENST00000470068 DDX54Q8TDD1 881 aaKnown RBP7.41□□□□□ -1.22
CCDC144A-212ENST00000470068 DNAI2Q9GZS0 605 aa7.41□□□□□ -1.22
CCDC144A-212ENST00000470068 DACH1Q9UI36 760 aa7.41□□□□□ -1.22
CCDC144A-212ENST00000470068 TROQ12816 1431 aaPredicted RBP7.41□□□□□ -1.22
CCDC144A-212ENST00000470068 TUBB4AP04350 444 aa7.41□□□□□ -1.22
CCDC144A-212ENST00000470068 RRP1P56182 461 aaKnown RBP7.41□□□□□ -1.22
CCDC144A-212ENST00000470068 AEBP1Q8IUX7 1158 aa7.41□□□□□ -1.22
CCDC144A-212ENST00000470068 GAS2L2Q8NHY3 880 aa7.41□□□□□ -1.22
CCDC144A-212ENST00000470068 SOS1Q07889 1333 aaPredicted RBP7.41□□□□□ -1.22
CCDC144A-212ENST00000470068 FAM184AQ8NB25 1140 aa7.41□□□□□ -1.22
CCDC144A-212ENST00000470068 L3MBTL2Q969R5 705 aa7.41□□□□□ -1.22
CCDC144A-212ENST00000470068 SUPT6HQ7KZ85 1726 aaKnown RBP7.41□□□□□ -1.22
CCDC144A-212ENST00000470068 WDR97A6NE52 1622 aa7.41□□□□□ -1.22
CCDC144A-212ENST00000470068 KRT27Q7Z3Y8 459 aa7.41□□□□□ -1.22
CCDC144A-212ENST00000470068 CCDC125Q86Z20 511 aa7.41□□□□□ -1.22
CCDC144A-212ENST00000470068 BRMS1Q9HCU9 246 aa7.41□□□□□ -1.22
CCDC144A-212ENST00000470068 KIAA1107Q9UPP5 1409 aa7.41□□□□□ -1.22
CCDC144A-212ENST00000470068 CAVIN2O95810 425 aa7.4□□□□□ -1.22
CCDC144A-212ENST00000470068 RGS3P49796 1198 aa7.4□□□□□ -1.22
CCDC144A-212ENST00000470068 MRE11P49959 708 aa7.4□□□□□ -1.22
CCDC144A-212ENST00000470068 TUBB4BP68371 445 aa7.4□□□□□ -1.22
CCDC144A-212ENST00000470068 TAF7LQ5H9L4 462 aa7.4□□□□□ -1.22
CCDC144A-212ENST00000470068 C1orf141Q5JVX7 400 aa7.4□□□□□ -1.22
CCDC144A-212ENST00000470068 AK7Q96M32 723 aa7.4□□□□□ -1.22
CCDC144A-212ENST00000470068 FOXO3O43524 673 aa7.4□□□□□ -1.22
CCDC144A-212ENST00000470068 SAFBQ15424 915 aaKnown RBP eCLIP7.4□□□□□ -1.22
CCDC144A-212ENST00000470068 JMYQ8N9B5 988 aa7.4□□□□□ -1.22
CCDC144A-212ENST00000470068 CCDC39Q9UFE4 941 aa7.4□□□□□ -1.22
CCDC144A-212ENST00000470068 ABT1Q9ULW3 272 aaKnown RBP7.4□□□□□ -1.23
CCDC144A-212ENST00000470068 IRX6P78412 446 aaPredicted RBP7.4□□□□□ -1.23
CCDC144A-212ENST00000470068 CC2D1BQ5T0F9 858 aaKnown RBP7.4□□□□□ -1.23
CCDC144A-212ENST00000470068 NOC3LQ8WTT2 800 aaKnown RBP7.4□□□□□ -1.23
CCDC144A-212ENST00000470068 SMG6Q86US8 1419 aaKnown RBP7.39□□□□□ -1.23
CCDC144A-212ENST00000470068 CCDC173Q0VFZ6 552 aa7.39□□□□□ -1.23
CCDC144A-212ENST00000470068 SF3A1Q15459 793 aaKnown RBP7.39□□□□□ -1.23
CCDC144A-212ENST00000470068 DENND4BO75064 1496 aaPredicted RBP7.39□□□□□ -1.23
CCDC144A-212ENST00000470068 TAOK2Q9UL54 1235 aa7.39□□□□□ -1.23
CCDC144A-212ENST00000470068 FANCAO15360 1455 aa7.39□□□□□ -1.23
CCDC144A-212ENST00000470068 KIAA0586Q9BVV6 1533 aa7.39□□□□□ -1.23
CCDC144A-212ENST00000470068 HMGB1P1B2RPK0 211 aaPredicted RBP7.39□□□□□ -1.23
CCDC144A-212ENST00000470068 DIAPH1O60610 1272 aaKnown RBP7.39□□□□□ -1.23
CCDC144A-212ENST00000470068 TRDNQ13061 729 aa7.39□□□□□ -1.23
CCDC144A-212ENST00000470068 RABEP1Q15276 862 aa7.39□□□□□ -1.23
CCDC144A-212ENST00000470068 ZNF408Q9H9D4 720 aa7.39□□□□□ -1.23
CCDC144A-212ENST00000470068 BCS1LQ9Y276 419 aa7.39□□□□□ -1.23
CCDC144A-212ENST00000470068 LMOD1P29536 600 aaPredicted RBP7.39□□□□□ -1.23
CCDC144A-212ENST00000470068 ZC3H6P61129 1189 aaKnown RBP7.39□□□□□ -1.23
CCDC144A-212ENST00000470068 RAPGEF4Q8WZA2 1011 aa7.39□□□□□ -1.23
CCDC144A-212ENST00000470068 SALL2Q9Y467 1007 aaPredicted RBP7.39□□□□□ -1.23
CCDC144A-212ENST00000470068 KDM6BO15054 1643 aa7.38□□□□□ -1.23
CCDC144A-212ENST00000470068 LRPPRCP42704 1394 aaKnown RBP7.38□□□□□ -1.23
CCDC144A-212ENST00000470068 ADRA2BP18089 450 aa7.38□□□□□ -1.23
CCDC144A-212ENST00000470068 FAM98CQ17RN3 349 aaKnown RBP7.38□□□□□ -1.23
CCDC144A-212ENST00000470068 SIN3AQ96ST3 1273 aa7.38□□□□□ -1.23
CCDC144A-212ENST00000470068 PYM1Q9BRP8 204 aaKnown RBP7.38□□□□□ -1.23
CCDC144A-212ENST00000470068 NUP160Q12769 1436 aa7.38□□□□□ -1.23
CCDC144A-212ENST00000470068 PTPRKQ15262 1439 aa7.38□□□□□ -1.23
CCDC144A-212ENST00000470068 ADGRL1O94910 1474 aa7.38□□□□□ -1.23
CCDC144A-212ENST00000470068 EXOC5O00471 708 aa7.38□□□□□ -1.23
CCDC144A-212ENST00000470068 DEKP35659 375 aaKnown RBP7.38□□□□□ -1.23
CCDC144A-212ENST00000470068 EAPPQ56P03 285 aaPredicted RBP7.38□□□□□ -1.23
CCDC144A-212ENST00000470068 ZSCAN25Q6NSZ9 544 aa7.38□□□□□ -1.23
CCDC144A-212ENST00000470068 ZSCAN31Q96LW9 406 aaPredicted RBP7.38□□□□□ -1.23
CCDC144A-212ENST00000470068 POLR3GO15318 223 aaPredicted RBP7.38□□□□□ -1.23
CCDC144A-212ENST00000470068 TNNT3P45378 269 aaPredicted RBP7.38□□□□□ -1.23
CCDC144A-212ENST00000470068 CCDC66A2RUB6 948 aa7.38□□□□□ -1.23
CCDC144A-212ENST00000470068 BECN2A8MW95 431 aa7.38□□□□□ -1.23
CCDC144A-212ENST00000470068 HOXA7P31268 230 aaPredicted RBP7.38□□□□□ -1.23
CCDC144A-212ENST00000470068 IQCEQ6IPM2 695 aa7.38□□□□□ -1.23
CCDC144A-212ENST00000470068 DZIP1LQ8IYY4 767 aaKnown RBP7.38□□□□□ -1.23
CCDC144A-212ENST00000470068 CDC45O75419 566 aa7.37□□□□□ -1.23
CCDC144A-212ENST00000470068 SLC3A2P08195 630 aaKnown RBP7.37□□□□□ -1.23
CCDC144A-212ENST00000470068 TSPYL1Q9H0U9 437 aa7.37□□□□□ -1.23
CCDC144A-212ENST00000470068 ABCA10Q8WWZ4 1543 aa7.37□□□□□ -1.23
CCDC144A-212ENST00000470068 H3BQV1 296 aa7.37□□□□□ -1.23
CCDC144A-212ENST00000470068 MCM3P25205 808 aa7.37□□□□□ -1.23
CCDC144A-212ENST00000470068 KRT32Q14532 448 aa7.37□□□□□ -1.23
CCDC144A-212ENST00000470068 GSE1Q14687 1217 aa7.37□□□□□ -1.23
CCDC144A-212ENST00000470068 IFFO2Q5TF58 517 aa7.37□□□□□ -1.23
CCDC144A-212ENST00000470068 ASXL2Q76L83 1435 aa7.37□□□□□ -1.23
CCDC144A-212ENST00000470068 MAGI1Q96QZ7 1491 aaPredicted RBP7.37□□□□□ -1.23
CCDC144A-212ENST00000470068 ZNF608Q9ULD9 1512 aaPredicted RBP7.37□□□□□ -1.23
CCDC144A-212ENST00000470068 ZNF396Q96N95 335 aaPredicted RBP7.37□□□□□ -1.23
CCDC144A-212ENST00000470068 C19orf44Q9H6X5 657 aa7.37□□□□□ -1.23
CCDC144A-212ENST00000470068 PPP4R3BQ5MIZ7 849 aa7.36□□□□□ -1.23
CCDC144A-212ENST00000470068 ERICH2A1L162 156 aa7.36□□□□□ -1.23
CCDC144A-212ENST00000470068 ZBTB7AO95365 584 aa7.36□□□□□ -1.23
CCDC144A-212ENST00000470068 SART3Q15020 963 aaKnown RBP7.36□□□□□ -1.23
CCDC144A-212ENST00000470068 ZRSR2Q15696 482 aaKnown RBP7.36□□□□□ -1.23
CCDC144A-212ENST00000470068 RBM42Q9BTD8 480 aaKnown RBP7.36□□□□□ -1.23
CCDC144A-212ENST00000470068 FAM13BQ9NYF5 915 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms