RNA–Protein interactions for RNA: ENST00000469653.5

SEMA4D-215, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 3,533 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-215ENST00000469653 CDC42BPGQ6DT37 1551 aa13.29□□□□□ -0.28
SEMA4D-215ENST00000469653 NOP58Q9Y2X3 529 aaKnown RBP13.29□□□□□ -0.28
SEMA4D-215ENST00000469653 NUTM2FA1L443 756 aa13.28□□□□□ -0.28
SEMA4D-215ENST00000469653 ATF3P18847 181 aa13.28□□□□□ -0.28
SEMA4D-215ENST00000469653 FMN2Q9NZ56 1722 aa13.28□□□□□ -0.28
SEMA4D-215ENST00000469653 SRPK2P78362 688 aaKnown RBP13.28□□□□□ -0.28
SEMA4D-215ENST00000469653 CABP2Q9NPB3 220 aa13.28□□□□□ -0.28
SEMA4D-215ENST00000469653 LAS1LQ9Y4W2 734 aaKnown RBP13.28□□□□□ -0.28
SEMA4D-215ENST00000469653 RGPD8O14715 1765 aaPredicted RBP13.27□□□□□ -0.28
SEMA4D-215ENST00000469653 CERKQ8TCT0 537 aa13.27□□□□□ -0.28
SEMA4D-215ENST00000469653 DCCP43146 1447 aa13.27□□□□□ -0.29
SEMA4D-215ENST00000469653 CADPS2Q86UW7 1296 aa13.26□□□□□ -0.29
SEMA4D-215ENST00000469653 USP32Q8NFA0 1604 aa13.25□□□□□ -0.29
SEMA4D-215ENST00000469653 CDCA8Q53HL2 280 aa13.24□□□□□ -0.29
SEMA4D-215ENST00000469653 NUDT16Q96DE0 195 aaKnown RBP13.24□□□□□ -0.29
SEMA4D-215ENST00000469653 IQSEC2Q5JU85 1478 aa13.23□□□□□ -0.29
SEMA4D-215ENST00000469653 PRR36Q9H6K5 1346 aa13.23□□□□□ -0.29
SEMA4D-215ENST00000469653 MST1RQ04912 1400 aa13.23□□□□□ -0.29
SEMA4D-215ENST00000469653 KIF7Q2M1P5 1343 aa13.23□□□□□ -0.29
SEMA4D-215ENST00000469653 NAP1L5Q96NT1 182 aaPredicted RBP13.23□□□□□ -0.29
SEMA4D-215ENST00000469653 ATP7BP35670 1465 aa13.23□□□□□ -0.29
SEMA4D-215ENST00000469653 ITSN1Q15811 1721 aa13.22□□□□□ -0.29
SEMA4D-215ENST00000469653 SLAIN2Q9P270 581 aa13.22□□□□□ -0.29
SEMA4D-215ENST00000469653 ANKARQ7Z5J8 1434 aa13.22□□□□□ -0.29
SEMA4D-215ENST00000469653 PUS7Q96PZ0 661 aaKnown RBP13.22□□□□□ -0.29
SEMA4D-215ENST00000469653 C1orf167Q5SNV9 1468 aa13.22□□□□□ -0.29
SEMA4D-215ENST00000469653 RTL5Q5HYW3 569 aaPredicted RBP13.21□□□□□ -0.29
SEMA4D-215ENST00000469653 ARID3AQ99856 593 aa13.21□□□□□ -0.29
SEMA4D-215ENST00000469653 ATAD2Q6PL18 1390 aa13.21□□□□□ -0.29
SEMA4D-215ENST00000469653 TOPAZ1Q8N9V7 1692 aa13.21□□□□□ -0.29
SEMA4D-215ENST00000469653 SMG6Q86US8 1419 aaKnown RBP13.21□□□□□ -0.3
SEMA4D-215ENST00000469653 ESCO1Q5FWF5 840 aa13.21□□□□□ -0.3
SEMA4D-215ENST00000469653 TMC1Q8TDI8 760 aa13.21□□□□□ -0.3
SEMA4D-215ENST00000469653 CCDC61Q9Y6R9 512 aa13.21□□□□□ -0.3
SEMA4D-215ENST00000469653 UBAP1LF5GYI3 381 aa13.2□□□□□ -0.3
SEMA4D-215ENST00000469653 TOM1O60784 492 aa13.2□□□□□ -0.3
SEMA4D-215ENST00000469653 ORAI2Q96SN7 254 aa13.2□□□□□ -0.3
SEMA4D-215ENST00000469653 PPIP5K1Q6PFW1 1433 aa13.2□□□□□ -0.3
SEMA4D-215ENST00000469653 SKAP1Q86WV1 359 aa13.19□□□□□ -0.3
SEMA4D-215ENST00000469653 CABP1Q9NZU7 370 aa13.19□□□□□ -0.3
SEMA4D-215ENST00000469653 RNF123Q5XPI4 1314 aa13.19□□□□□ -0.3
SEMA4D-215ENST00000469653 MYOM1P52179 1685 aa13.19□□□□□ -0.3
SEMA4D-215ENST00000469653 PMFBP1Q8TBY8 1022 aa13.18□□□□□ -0.3
SEMA4D-215ENST00000469653 SLC12A5Q9H2X9 1139 aa13.18□□□□□ -0.3
SEMA4D-215ENST00000469653 PIP4K2BP78356 416 aa13.17□□□□□ -0.3
SEMA4D-215ENST00000469653 PHF8Q9UPP1 1060 aa13.17□□□□□ -0.3
SEMA4D-215ENST00000469653 CNKSR2Q8WXI2 1034 aa13.17□□□□□ -0.3
SEMA4D-215ENST00000469653 IPO9Q96P70 1041 aaKnown RBP13.17□□□□□ -0.3
SEMA4D-215ENST00000469653 NUDCQ9Y266 331 aa13.17□□□□□ -0.3
SEMA4D-215ENST00000469653 BRINP3Q76B58 766 aa13.17□□□□□ -0.3
SEMA4D-215ENST00000469653 ROBO1Q9Y6N7 1651 aa13.16□□□□□ -0.3
SEMA4D-215ENST00000469653 KIF1AQ12756 1690 aa13.16□□□□□ -0.3
SEMA4D-215ENST00000469653 PLEKHG3A1L390 1219 aa13.16□□□□□ -0.3
SEMA4D-215ENST00000469653 NINLQ9Y2I6 1382 aa13.15□□□□□ -0.3
SEMA4D-215ENST00000469653 NGDNQ8NEJ9 315 aaKnown RBP13.15□□□□□ -0.3
SEMA4D-215ENST00000469653 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.15□□□□□ -0.3
SEMA4D-215ENST00000469653 ACEP12821 1306 aa13.15□□□□□ -0.3
SEMA4D-215ENST00000469653 AKAP12Q02952 1782 aa13.14□□□□□ -0.31
SEMA4D-215ENST00000469653 FOXO3O43524 673 aa13.14□□□□□ -0.31
SEMA4D-215ENST00000469653 RBM10P98175 930 aaKnown RBP13.14□□□□□ -0.31
SEMA4D-215ENST00000469653 DDX17Q92841 729 aaKnown RBP13.14□□□□□ -0.31
SEMA4D-215ENST00000469653 CD163L1Q9NR16 1453 aa13.13□□□□□ -0.31
SEMA4D-215ENST00000469653 ANP32AP39687 249 aaKnown RBP13.13□□□□□ -0.31
SEMA4D-215ENST00000469653 IL27Q8NEV9 243 aa13.13□□□□□ -0.31
SEMA4D-215ENST00000469653 AAMPQ13685 434 aa13.13□□□□□ -0.31
SEMA4D-215ENST00000469653 TERF2IPQ9NYB0 399 aa13.13□□□□□ -0.31
SEMA4D-215ENST00000469653 POLR3AO14802 1390 aaPredicted RBP13.13□□□□□ -0.31
SEMA4D-215ENST00000469653 HDGFL2Q7Z4V5 671 aaPredicted RBP13.12□□□□□ -0.31
SEMA4D-215ENST00000469653 PANK3Q9H999 370 aa13.12□□□□□ -0.31
SEMA4D-215ENST00000469653 A0A1W2PP64 1363 aa13.12□□□□□ -0.31
SEMA4D-215ENST00000469653 PSME1Q06323 249 aa13.12□□□□□ -0.31
SEMA4D-215ENST00000469653 CPSF1Q10570 1443 aaKnown RBP13.12□□□□□ -0.31
SEMA4D-215ENST00000469653 XPCQ01831 940 aaPredicted RBP13.12□□□□□ -0.31
SEMA4D-215ENST00000469653 ANKRD36BQ8N2N9 1353 aa13.11□□□□□ -0.31
SEMA4D-215ENST00000469653 SLC4A3P48751 1232 aa13.11□□□□□ -0.31
SEMA4D-215ENST00000469653 ZBTB47Q9UFB7 747 aaPredicted RBP13.11□□□□□ -0.31
SEMA4D-215ENST00000469653 KTN1Q86UP2 1357 aaKnown RBP13.11□□□□□ -0.31
SEMA4D-215ENST00000469653 MON2Q7Z3U7 1717 aa13.11□□□□□ -0.31
SEMA4D-215ENST00000469653 NHSL1Q5SYE7 1610 aa13.11□□□□□ -0.31
SEMA4D-215ENST00000469653 ZNF692Q9BU19 519 aaPredicted RBP13.11□□□□□ -0.31
SEMA4D-215ENST00000469653 NPHP3Q7Z494 1330 aa13.1□□□□□ -0.31
SEMA4D-215ENST00000469653 KRT28Q7Z3Y7 464 aa13.09□□□□□ -0.31
SEMA4D-215ENST00000469653 CARD14Q9BXL6 1004 aa13.09□□□□□ -0.31
SEMA4D-215ENST00000469653 USP6P35125 1406 aa13.09□□□□□ -0.31
SEMA4D-215ENST00000469653 PNISRQ8TF01 805 aaKnown RBP13.08□□□□□ -0.32
SEMA4D-215ENST00000469653 PHLPP1O60346 1717 aa13.08□□□□□ -0.32
SEMA4D-215ENST00000469653 PXDNQ92626 1479 aa13.08□□□□□ -0.32
SEMA4D-215ENST00000469653 AHDC1Q5TGY3 1603 aaPredicted RBP13.07□□□□□ -0.32
SEMA4D-215ENST00000469653 NRKQ7Z2Y5 1582 aa13.07□□□□□ -0.32
SEMA4D-215ENST00000469653 NSD3Q9BZ95 1437 aa13.07□□□□□ -0.32
SEMA4D-215ENST00000469653 TRPM3Q9HCF6 1732 aaPredicted RBP13.07□□□□□ -0.32
SEMA4D-215ENST00000469653 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.07□□□□□ -0.32
SEMA4D-215ENST00000469653 SOS2Q07890 1332 aaPredicted RBP13.06□□□□□ -0.32
SEMA4D-215ENST00000469653 EDC4Q6P2E9 1401 aaKnown RBP13.06□□□□□ -0.32
SEMA4D-215ENST00000469653 PRDM10Q9NQV6 1147 aa13.05□□□□□ -0.32
SEMA4D-215ENST00000469653 KNSTRNQ9Y448 316 aa13.05□□□□□ -0.32
SEMA4D-215ENST00000469653 TTC21BQ7Z4L5 1316 aa13.05□□□□□ -0.32
SEMA4D-215ENST00000469653 SSH2Q76I76 1423 aa13.05□□□□□ -0.32
SEMA4D-215ENST00000469653 PER1O15534 1290 aaPredicted RBP13.05□□□□□ -0.32
SEMA4D-215ENST00000469653 BRD4O60885 1362 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms