RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 SULT6B1Q6IMI4 303 aa15.52■□□□□ 0.07
USP11-206ENST00000469080 PRDM10Q9NQV6 1147 aa15.51■□□□□ 0.07
USP11-206ENST00000469080 IQGAP3Q86VI3 1631 aa15.51■□□□□ 0.07
USP11-206ENST00000469080 RPGRIP1LQ68CZ1 1315 aa15.51■□□□□ 0.07
USP11-206ENST00000469080 DHX37Q8IY37 1157 aaKnown RBP15.51■□□□□ 0.07
USP11-206ENST00000469080 BACH2Q9BYV9 841 aa15.51■□□□□ 0.07
USP11-206ENST00000469080 ERVK-7P63135 1459 aa15.51■□□□□ 0.07
USP11-206ENST00000469080 HDGFP51858 240 aaKnown RBP15.51■□□□□ 0.07
USP11-206ENST00000469080 PHACTR3Q96KR7 559 aa15.51■□□□□ 0.07
USP11-206ENST00000469080 A0A0G2JS52 829 aa15.5■□□□□ 0.07
USP11-206ENST00000469080 NOB1Q9ULX3 412 aaKnown RBP15.5■□□□□ 0.07
USP11-206ENST00000469080 PLXNC1O60486 1568 aa15.5■□□□□ 0.07
USP11-206ENST00000469080 VGLL3A8MV65 326 aa15.49■□□□□ 0.07
USP11-206ENST00000469080 KRT24Q2M2I5 525 aa15.49■□□□□ 0.07
USP11-206ENST00000469080 AEBP1Q8IUX7 1158 aa15.49■□□□□ 0.07
USP11-206ENST00000469080 NLRP6P59044 892 aa15.49■□□□□ 0.07
USP11-206ENST00000469080 MCM10Q7L590 875 aa15.49■□□□□ 0.07
USP11-206ENST00000469080 MLH3Q9UHC1 1453 aa15.49■□□□□ 0.07
USP11-206ENST00000469080 RARSP54136 660 aaKnown RBP15.48■□□□□ 0.07
USP11-206ENST00000469080 MFAP1P55081 439 aaKnown RBP15.48■□□□□ 0.07
USP11-206ENST00000469080 PTPRTO14522 1441 aa15.48■□□□□ 0.07
USP11-206ENST00000469080 UNC13BO14795 1591 aa15.48■□□□□ 0.07
USP11-206ENST00000469080 USHBP1Q8N6Y0 703 aa15.48■□□□□ 0.07
USP11-206ENST00000469080 SSH1Q8WYL5 1049 aa15.48■□□□□ 0.07
USP11-206ENST00000469080 CENPQQ7L2Z9 268 aaPredicted RBP15.48■□□□□ 0.07
USP11-206ENST00000469080 IPO4Q8TEX9 1081 aaKnown RBP15.48■□□□□ 0.07
USP11-206ENST00000469080 LNPKQ9C0E8 428 aa15.48■□□□□ 0.07
USP11-206ENST00000469080 ZKSCAN2Q63HK3 967 aa15.47■□□□□ 0.07
USP11-206ENST00000469080 CEP152O94986 1710 aa15.47■□□□□ 0.07
USP11-206ENST00000469080 DZIP1LQ8IYY4 767 aaKnown RBP15.47■□□□□ 0.07
USP11-206ENST00000469080 INO80Q9ULG1 1556 aaPredicted RBP15.47■□□□□ 0.07
USP11-206ENST00000469080 TRPM2O94759 1503 aa15.47■□□□□ 0.07
USP11-206ENST00000469080 FAM13BQ9NYF5 915 aa15.47■□□□□ 0.07
USP11-206ENST00000469080 MAP3K4Q9Y6R4 1608 aa15.46■□□□□ 0.07
USP11-206ENST00000469080 WASLO00401 505 aaPredicted RBP15.46■□□□□ 0.07
USP11-206ENST00000469080 HSP90AB2PQ58FF8 381 aa15.46■□□□□ 0.07
USP11-206ENST00000469080 FOXD4L1Q9NU39 408 aa15.46■□□□□ 0.07
USP11-206ENST00000469080 AMOTL2Q9Y2J4 779 aa15.46■□□□□ 0.07
USP11-206ENST00000469080 TPM2P07951 284 aa15.45■□□□□ 0.06
USP11-206ENST00000469080 LTKP29376 864 aa15.45■□□□□ 0.06
USP11-206ENST00000469080 CCDC61Q9Y6R9 512 aa15.45■□□□□ 0.06
USP11-206ENST00000469080 TPRNQ4KMQ1 711 aa15.45■□□□□ 0.06
USP11-206ENST00000469080 POLKQ9UBT6 870 aa15.45■□□□□ 0.06
USP11-206ENST00000469080 PCDHB15Q9Y5E8 787 aa15.45■□□□□ 0.06
USP11-206ENST00000469080 UPF2Q9HAU5 1272 aaKnown RBP15.44■□□□□ 0.06
USP11-206ENST00000469080 HECW2Q9P2P5 1572 aa15.44■□□□□ 0.06
USP11-206ENST00000469080 EIF2AK4Q9P2K8 1649 aaKnown RBP15.44■□□□□ 0.06
USP11-206ENST00000469080 ABCA6Q8N139 1617 aa15.44■□□□□ 0.06
USP11-206ENST00000469080 NCLP19338 710 aaKnown RBP15.44■□□□□ 0.06
USP11-206ENST00000469080 TSPYL6Q8N831 410 aa15.44■□□□□ 0.06
USP11-206ENST00000469080 GZF1Q9H116 711 aaPredicted RBP15.43■□□□□ 0.06
USP11-206ENST00000469080 ZMYM3Q14202 1370 aa15.43■□□□□ 0.06
USP11-206ENST00000469080 RTF1Q92541 710 aaKnown RBP15.42■□□□□ 0.06
USP11-206ENST00000469080 PANK2Q9BZ23 570 aa15.42■□□□□ 0.06
USP11-206ENST00000469080 PDZRN3Q9UPQ7 1066 aa15.42■□□□□ 0.06
USP11-206ENST00000469080 FRMPD1Q5SYB0 1578 aa15.42■□□□□ 0.06
USP11-206ENST00000469080 ANKRD45Q5TZF3 282 aa15.42■□□□□ 0.06
USP11-206ENST00000469080 TMEM57Q8N5G2 664 aa15.42■□□□□ 0.06
USP11-206ENST00000469080 GLI2P10070 1586 aa15.42■□□□□ 0.06
USP11-206ENST00000469080 FOXO3O43524 673 aa15.42■□□□□ 0.06
USP11-206ENST00000469080 ABTB2Q8N961 1025 aa15.42■□□□□ 0.06
USP11-206ENST00000469080 ANP32BQ92688 251 aaKnown RBP15.42■□□□□ 0.06
USP11-206ENST00000469080 SPHKAPQ2M3C7 1700 aa15.42■□□□□ 0.06
USP11-206ENST00000469080 YTHDC2Q9H6S0 1430 aaKnown RBP15.41■□□□□ 0.06
USP11-206ENST00000469080 RNF123Q5XPI4 1314 aa15.41■□□□□ 0.06
USP11-206ENST00000469080 GOLGA6L3A6NEY3 463 aa15.41■□□□□ 0.06
USP11-206ENST00000469080 EIF2S2P20042 333 aaKnown RBP15.41■□□□□ 0.06
USP11-206ENST00000469080 RIMS2Q9UQ26 1411 aa15.4■□□□□ 0.06
USP11-206ENST00000469080 FAM161AQ3B820 660 aa15.4■□□□□ 0.06
USP11-206ENST00000469080 ESCO1Q5FWF5 840 aa15.4■□□□□ 0.06
USP11-206ENST00000469080 RWDD1Q9H446 243 aaPredicted RBP15.4■□□□□ 0.06
USP11-206ENST00000469080 METP08581 1390 aa15.4■□□□□ 0.06
USP11-206ENST00000469080 ACEP12821 1306 aa15.4■□□□□ 0.06
USP11-206ENST00000469080 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.4■□□□□ 0.06
USP11-206ENST00000469080 ANKRD36BQ8N2N9 1353 aa15.4■□□□□ 0.06
USP11-206ENST00000469080 KIAA1211Q6ZU35 1233 aa15.4■□□□□ 0.06
USP11-206ENST00000469080 MADDQ8WXG6 1647 aa15.39■□□□□ 0.05
USP11-206ENST00000469080 MAPK8IP2Q13387 824 aaPredicted RBP15.39■□□□□ 0.05
USP11-206ENST00000469080 TRIM44Q96DX7 344 aaPredicted RBP15.39■□□□□ 0.05
USP11-206ENST00000469080 CFAP74Q9C0B2 1584 aa15.39■□□□□ 0.05
USP11-206ENST00000469080 PPRC1Q5VV67 1664 aaKnown RBP15.39■□□□□ 0.05
USP11-206ENST00000469080 DIP2CQ9Y2E4 1556 aa15.39■□□□□ 0.05
USP11-206ENST00000469080 XRCC6P12956 609 aaKnown RBP eCLIP15.39■□□□□ 0.05
USP11-206ENST00000469080 TRIM27P14373 513 aa15.39■□□□□ 0.05
USP11-206ENST00000469080 NKTRP30414 1462 aaKnown RBP15.39■□□□□ 0.05
USP11-206ENST00000469080 KIF13AQ9H1H9 1805 aa15.39■□□□□ 0.05
USP11-206ENST00000469080 ATAD2Q6PL18 1390 aa15.38■□□□□ 0.05
USP11-206ENST00000469080 EFCAB6Q5THR3 1501 aa15.38■□□□□ 0.05
USP11-206ENST00000469080 ESPNB1AK53 854 aa15.38■□□□□ 0.05
USP11-206ENST00000469080 SEC24BO95487 1268 aa15.38■□□□□ 0.05
USP11-206ENST00000469080 KIF1BO60333 1816 aa15.38■□□□□ 0.05
USP11-206ENST00000469080 RNF17Q9BXT8 1623 aaKnown RBP15.38■□□□□ 0.05
USP11-206ENST00000469080 TET3O43151 1660 aa15.37■□□□□ 0.05
USP11-206ENST00000469080 PIK3C2GO75747 1445 aa15.37■□□□□ 0.05
USP11-206ENST00000469080 ABCC3O15438 1527 aa15.37■□□□□ 0.05
USP11-206ENST00000469080 RICTORQ6R327 1708 aa15.36■□□□□ 0.05
USP11-206ENST00000469080 PSME1Q06323 249 aa15.36■□□□□ 0.05
USP11-206ENST00000469080 TWISTNBQ3B726 338 aaPredicted RBP15.36■□□□□ 0.05
USP11-206ENST00000469080 NGEFQ8N5V2 710 aa15.36■□□□□ 0.05
USP11-206ENST00000469080 ZFP91Q96JP5 570 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms