RNA–Protein interactions for RNA: ENST00000469066.1

BRPF1-207, Transcript of bromodomain and PHD finger containing 1, humanhuman

TSL 3

Gene BRPF1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1-207ENST00000469066 SLIT2O94813 1529 aa13.59□□□□□ -0.23
BRPF1-207ENST00000469066 RXRBP28702 533 aa13.59□□□□□ -0.23
BRPF1-207ENST00000469066 RBM6P78332 1123 aaKnown RBP13.59□□□□□ -0.23
BRPF1-207ENST00000469066 USP21Q9UK80 565 aa13.59□□□□□ -0.23
BRPF1-207ENST00000469066 ONECUT3O60422 494 aaPredicted RBP13.58□□□□□ -0.24
BRPF1-207ENST00000469066 SLC24A1O60721 1099 aa13.58□□□□□ -0.24
BRPF1-207ENST00000469066 UNC5CLQ8IV45 518 aa13.58□□□□□ -0.24
BRPF1-207ENST00000469066 CCER1Q8TC90 406 aaPredicted RBP13.58□□□□□ -0.24
BRPF1-207ENST00000469066 TOPAZ1Q8N9V7 1692 aa13.57□□□□□ -0.24
BRPF1-207ENST00000469066 ALS2Q96Q42 1657 aa13.57□□□□□ -0.24
BRPF1-207ENST00000469066 TRPC5Q9UL62 973 aaPredicted RBP13.57□□□□□ -0.24
BRPF1-207ENST00000469066 ATRNO75882 1429 aa13.56□□□□□ -0.24
BRPF1-207ENST00000469066 PAK3O75914 559 aaPredicted RBP13.56□□□□□ -0.24
BRPF1-207ENST00000469066 LMOD2Q6P5Q4 547 aa13.56□□□□□ -0.24
BRPF1-207ENST00000469066 SLC12A5Q9H2X9 1139 aa13.56□□□□□ -0.24
BRPF1-207ENST00000469066 USP19O94966 1318 aa13.56□□□□□ -0.24
BRPF1-207ENST00000469066 QRICH2Q9H0J4 1663 aa13.56□□□□□ -0.24
BRPF1-207ENST00000469066 CDK12Q9NYV4 1490 aaPredicted RBP13.55□□□□□ -0.24
BRPF1-207ENST00000469066 ABTB2Q8N961 1025 aa13.55□□□□□ -0.24
BRPF1-207ENST00000469066 GJD4Q96KN9 370 aaPredicted RBP13.55□□□□□ -0.24
BRPF1-207ENST00000469066 TTC21BQ7Z4L5 1316 aa13.55□□□□□ -0.24
BRPF1-207ENST00000469066 ATAD2Q6PL18 1390 aa13.55□□□□□ -0.24
BRPF1-207ENST00000469066 USP6P35125 1406 aa13.55□□□□□ -0.24
BRPF1-207ENST00000469066 CD163L1Q9NR16 1453 aa13.55□□□□□ -0.24
BRPF1-207ENST00000469066 GCP02774 474 aa13.54□□□□□ -0.24
BRPF1-207ENST00000469066 VPS72Q15906 364 aa13.53□□□□□ -0.24
BRPF1-207ENST00000469066 NUTM2GQ5VZR2 741 aa13.53□□□□□ -0.24
BRPF1-207ENST00000469066 NLRP13Q86W25 1043 aa13.53□□□□□ -0.24
BRPF1-207ENST00000469066 ITSN1Q15811 1721 aa13.51□□□□□ -0.25
BRPF1-207ENST00000469066 USP47Q96K76 1375 aa13.51□□□□□ -0.25
BRPF1-207ENST00000469066 CPDO75976 1380 aa13.5□□□□□ -0.25
BRPF1-207ENST00000469066 TTC21AQ8NDW8 1320 aa13.5□□□□□ -0.25
BRPF1-207ENST00000469066 NLRP6P59044 892 aa13.5□□□□□ -0.25
BRPF1-207ENST00000469066 BTG4Q9NY30 223 aa13.5□□□□□ -0.25
BRPF1-207ENST00000469066 USP31Q70CQ4 1352 aa13.49□□□□□ -0.25
BRPF1-207ENST00000469066 KIAA0232Q92628 1395 aa13.49□□□□□ -0.25
BRPF1-207ENST00000469066 ZC3H6P61129 1189 aaKnown RBP13.49□□□□□ -0.25
BRPF1-207ENST00000469066 CRYBG1Q9Y4K1 1723 aa13.49□□□□□ -0.25
BRPF1-207ENST00000469066 KTN1Q86UP2 1357 aaKnown RBP13.48□□□□□ -0.25
BRPF1-207ENST00000469066 MARF1Q9Y4F3 1742 aaKnown RBP13.48□□□□□ -0.25
BRPF1-207ENST00000469066 PLEKHG5O94827 1062 aa13.48□□□□□ -0.25
BRPF1-207ENST00000469066 ARHGEF25Q86VW2 580 aa13.48□□□□□ -0.25
BRPF1-207ENST00000469066 UPF1Q92900 1129 aaKnown RBP eCLIP13.48□□□□□ -0.25
BRPF1-207ENST00000469066 ZRANB1Q9UGI0 708 aa13.48□□□□□ -0.25
BRPF1-207ENST00000469066 HAP1P54257 671 aaPredicted RBP13.47□□□□□ -0.25
BRPF1-207ENST00000469066 TMF1P82094 1093 aa13.47□□□□□ -0.25
BRPF1-207ENST00000469066 CHRNA2Q15822 529 aa13.47□□□□□ -0.25
BRPF1-207ENST00000469066 RGS12O14924 1447 aa13.47□□□□□ -0.25
BRPF1-207ENST00000469066 SPATA31A5Q5VU36 1347 aa13.46□□□□□ -0.25
BRPF1-207ENST00000469066 SPATA31A7Q8IWB4 1347 aa13.46□□□□□ -0.25
BRPF1-207ENST00000469066 TMC1Q8TDI8 760 aa13.46□□□□□ -0.25
BRPF1-207ENST00000469066 PRDM11Q9NQV5 511 aa13.46□□□□□ -0.25
BRPF1-207ENST00000469066 TERF2IPQ9NYB0 399 aa13.46□□□□□ -0.25
BRPF1-207ENST00000469066 AXIN2Q9Y2T1 843 aa13.46□□□□□ -0.25
BRPF1-207ENST00000469066 ABCA3Q99758 1704 aa13.46□□□□□ -0.25
BRPF1-207ENST00000469066 NINLQ9Y2I6 1382 aa13.45□□□□□ -0.26
BRPF1-207ENST00000469066 C11orf95C9JLR9 678 aaPredicted RBP13.45□□□□□ -0.26
BRPF1-207ENST00000469066 CARD14Q9BXL6 1004 aa13.45□□□□□ -0.26
BRPF1-207ENST00000469066 A0A1W2PP64 1363 aa13.45□□□□□ -0.26
BRPF1-207ENST00000469066 AATKQ6ZMQ8 1374 aa13.45□□□□□ -0.26
BRPF1-207ENST00000469066 SLIT3O75094 1523 aa13.44□□□□□ -0.26
BRPF1-207ENST00000469066 CAMTA1Q9Y6Y1 1673 aa13.44□□□□□ -0.26
BRPF1-207ENST00000469066 HSPA5P11021 654 aaKnown RBP13.44□□□□□ -0.26
BRPF1-207ENST00000469066 HDGFL2Q7Z4V5 671 aaPredicted RBP13.44□□□□□ -0.26
BRPF1-207ENST00000469066 NME9Q86XW9 330 aa13.44□□□□□ -0.26
BRPF1-207ENST00000469066 GLI3P10071 1580 aa13.44□□□□□ -0.26
BRPF1-207ENST00000469066 SPATA31A1Q5TZJ5 1347 aa13.43□□□□□ -0.26
BRPF1-207ENST00000469066 FYB1O15117 783 aa13.43□□□□□ -0.26
BRPF1-207ENST00000469066 EIF4G2P78344 907 aaKnown RBP eCLIP13.43□□□□□ -0.26
BRPF1-207ENST00000469066 CDCA8Q53HL2 280 aa13.43□□□□□ -0.26
BRPF1-207ENST00000469066 EDC4Q6P2E9 1401 aaKnown RBP13.43□□□□□ -0.26
BRPF1-207ENST00000469066 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.43□□□□□ -0.26
BRPF1-207ENST00000469066 KCNH5Q8NCM2 988 aa13.43□□□□□ -0.26
BRPF1-207ENST00000469066 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.43□□□□□ -0.26
BRPF1-207ENST00000469066 EP400Q96L91 3159 aa13.43□□□□□ -0.26
BRPF1-207ENST00000469066 SEPT12Q8IYM1 358 aa13.42□□□□□ -0.26
BRPF1-207ENST00000469066 AKAP12Q02952 1782 aa13.42□□□□□ -0.26
BRPF1-207ENST00000469066 COL14A1Q05707 1796 aaKnown RBP13.42□□□□□ -0.26
BRPF1-207ENST00000469066 ANKRD36BQ8N2N9 1353 aa13.42□□□□□ -0.26
BRPF1-207ENST00000469066 NWD2Q9ULI1 1742 aa13.42□□□□□ -0.26
BRPF1-207ENST00000469066 PIK3C2AO00443 1686 aa13.41□□□□□ -0.26
BRPF1-207ENST00000469066 LARP1Q6PKG0 1096 aaKnown RBP13.41□□□□□ -0.26
BRPF1-207ENST00000469066 BARGINQ6ZT62 677 aa13.4□□□□□ -0.26
BRPF1-207ENST00000469066 NRKQ7Z2Y5 1582 aa13.4□□□□□ -0.26
BRPF1-207ENST00000469066 PHRF1Q9P1Y6 1649 aaKnown RBP13.39□□□□□ -0.27
BRPF1-207ENST00000469066 LMO7Q8WWI1 1683 aa13.39□□□□□ -0.27
BRPF1-207ENST00000469066 NRAPQ86VF7 1730 aa13.39□□□□□ -0.27
BRPF1-207ENST00000469066 COL18A1P39060 1754 aa13.38□□□□□ -0.27
BRPF1-207ENST00000469066 FAM98CQ17RN3 349 aaKnown RBP13.38□□□□□ -0.27
BRPF1-207ENST00000469066 NFAT5O94916 1531 aa13.38□□□□□ -0.27
BRPF1-207ENST00000469066 OVOS2A0A0J9YW53 1432 aa13.38□□□□□ -0.27
BRPF1-207ENST00000469066 OVOS2Q6IE36 1432 aa13.38□□□□□ -0.27
BRPF1-207ENST00000469066 PLCH1Q4KWH8 1693 aa13.37□□□□□ -0.27
BRPF1-207ENST00000469066 MON2Q7Z3U7 1717 aa13.37□□□□□ -0.27
BRPF1-207ENST00000469066 FBLN1P23142 703 aa13.37□□□□□ -0.27
BRPF1-207ENST00000469066 EVA1CP58658 441 aa13.37□□□□□ -0.27
BRPF1-207ENST00000469066 THRAP3Q9Y2W1 955 aaKnown RBP13.37□□□□□ -0.27
BRPF1-207ENST00000469066 STRN4Q9NRL3 753 aa13.36□□□□□ -0.27
BRPF1-207ENST00000469066 COL5A2P05997 1499 aaPredicted RBP13.36□□□□□ -0.27
BRPF1-207ENST00000469066 USP54Q70EL1 1684 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms