RNA–Protein interactions for RNA: ENST00000468516.1

FOXN4-204, Transcript of forkhead box N4, humanhuman

TSL 2

Gene FOXN4, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-204ENST00000468516 ZNF142P52746 1687 aaPredicted RBP17.09■□□□□ 0.33
FOXN4-204ENST00000468516 WDR63Q8IWG1 891 aa17.08■□□□□ 0.32
FOXN4-204ENST00000468516 LTKP29376 864 aa17.07■□□□□ 0.32
FOXN4-204ENST00000468516 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.07■□□□□ 0.32
FOXN4-204ENST00000468516 SPINK5Q9NQ38 1064 aaPredicted RBP17.07■□□□□ 0.32
FOXN4-204ENST00000468516 AATKQ6ZMQ8 1374 aa17.07■□□□□ 0.32
FOXN4-204ENST00000468516 TXNDC2Q86VQ3 553 aa17.06■□□□□ 0.32
FOXN4-204ENST00000468516 TCP11L2Q8N4U5 519 aa17.06■□□□□ 0.32
FOXN4-204ENST00000468516 PTPRUQ92729 1446 aa17.06■□□□□ 0.32
FOXN4-204ENST00000468516 CEP170BQ9Y4F5 1589 aaPredicted RBP17.06■□□□□ 0.32
FOXN4-204ENST00000468516 CDK12Q9NYV4 1490 aaPredicted RBP17.06■□□□□ 0.32
FOXN4-204ENST00000468516 MAP2P11137 1827 aaKnown RBP17.06■□□□□ 0.32
FOXN4-204ENST00000468516 NUDT16Q96DE0 195 aaKnown RBP17.05■□□□□ 0.32
FOXN4-204ENST00000468516 EID1Q9Y6B2 187 aa17.05■□□□□ 0.32
FOXN4-204ENST00000468516 CCDC61Q9Y6R9 512 aa17.05■□□□□ 0.32
FOXN4-204ENST00000468516 NALCNQ8IZF0 1738 aa17.05■□□□□ 0.32
FOXN4-204ENST00000468516 PLEKHF1Q96S99 279 aa17.04■□□□□ 0.32
FOXN4-204ENST00000468516 TBX22Q9Y458 520 aa17.04■□□□□ 0.32
FOXN4-204ENST00000468516 DMRT2Q9Y5R5 561 aa17.03■□□□□ 0.32
FOXN4-204ENST00000468516 ADAMTSL3P82987 1691 aa17.03■□□□□ 0.32
FOXN4-204ENST00000468516 CEBPAP49715 358 aaPredicted RBP17.02■□□□□ 0.32
FOXN4-204ENST00000468516 LRRC7Q96NW7 1537 aa17.02■□□□□ 0.32
FOXN4-204ENST00000468516 PRR36Q9H6K5 1346 aa17.02■□□□□ 0.32
FOXN4-204ENST00000468516 PIK3R4Q99570 1358 aa17.02■□□□□ 0.31
FOXN4-204ENST00000468516 PLIN1O60240 522 aa17.02■□□□□ 0.31
FOXN4-204ENST00000468516 U2AF1L5P0DN76 240 aaPredicted RBP17.02■□□□□ 0.31
FOXN4-204ENST00000468516 U2AF1Q01081 240 aaKnown RBP eCLIP17.02■□□□□ 0.31
FOXN4-204ENST00000468516 THEMISQ8N1K5 641 aaPredicted RBP17.02■□□□□ 0.31
FOXN4-204ENST00000468516 CRBNQ96SW2 442 aa17.02■□□□□ 0.31
FOXN4-204ENST00000468516 ZNF692Q9BU19 519 aaPredicted RBP17.02■□□□□ 0.31
FOXN4-204ENST00000468516 PNNQ9H307 717 aaKnown RBP17.01■□□□□ 0.31
FOXN4-204ENST00000468516 DIAPH1O60610 1272 aaKnown RBP17■□□□□ 0.31
FOXN4-204ENST00000468516 FANCIQ9NVI1 1328 aa17■□□□□ 0.31
FOXN4-204ENST00000468516 PLEKHG3A1L390 1219 aa16.98■□□□□ 0.31
FOXN4-204ENST00000468516 POLKQ9UBT6 870 aa16.98■□□□□ 0.31
FOXN4-204ENST00000468516 IL16Q14005 1332 aa16.98■□□□□ 0.31
FOXN4-204ENST00000468516 OVOS2A0A0J9YW53 1432 aa16.98■□□□□ 0.31
FOXN4-204ENST00000468516 OVOS2Q6IE36 1432 aa16.98■□□□□ 0.31
FOXN4-204ENST00000468516 USP54Q70EL1 1684 aa16.97■□□□□ 0.31
FOXN4-204ENST00000468516 CT47B1P0C2W7 299 aaPredicted RBP16.97■□□□□ 0.31
FOXN4-204ENST00000468516 C20orf194Q5TEA3 1177 aa16.97■□□□□ 0.31
FOXN4-204ENST00000468516 USP6P35125 1406 aa16.96■□□□□ 0.31
FOXN4-204ENST00000468516 SSH2Q76I76 1423 aa16.96■□□□□ 0.31
FOXN4-204ENST00000468516 FCHSD2O94868 740 aa16.96■□□□□ 0.31
FOXN4-204ENST00000468516 PDE3AQ14432 1141 aa16.96■□□□□ 0.31
FOXN4-204ENST00000468516 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.96■□□□□ 0.31
FOXN4-204ENST00000468516 MYH16Q9H6N6 1097 aa16.96■□□□□ 0.31
FOXN4-204ENST00000468516 FMN2Q9NZ56 1722 aa16.96■□□□□ 0.31
FOXN4-204ENST00000468516 TRHP20396 242 aaPredicted RBP16.95■□□□□ 0.3
FOXN4-204ENST00000468516 TMPOP42166 694 aaKnown RBP16.95■□□□□ 0.3
FOXN4-204ENST00000468516 RRP7AQ9Y3A4 280 aaKnown RBP16.95■□□□□ 0.3
FOXN4-204ENST00000468516 ANKARQ7Z5J8 1434 aa16.95■□□□□ 0.3
FOXN4-204ENST00000468516 KDM2BQ8NHM5 1336 aa16.94■□□□□ 0.3
FOXN4-204ENST00000468516 MAPK8IP3Q9UPT6 1336 aa16.94■□□□□ 0.3
FOXN4-204ENST00000468516 CHD2O14647 1828 aaKnown RBP16.94■□□□□ 0.3
FOXN4-204ENST00000468516 U2SURPO15042 1029 aaKnown RBP16.94■□□□□ 0.3
FOXN4-204ENST00000468516 NME9Q86XW9 330 aa16.94■□□□□ 0.3
FOXN4-204ENST00000468516 TCERG1O14776 1098 aaKnown RBP16.93■□□□□ 0.3
FOXN4-204ENST00000468516 COG3Q96JB2 828 aa16.93■□□□□ 0.3
FOXN4-204ENST00000468516 RSPH6AQ9H0K4 717 aa16.93■□□□□ 0.3
FOXN4-204ENST00000468516 TRIM35Q9UPQ4 493 aa16.93■□□□□ 0.3
FOXN4-204ENST00000468516 AMOTL2Q9Y2J4 779 aa16.93■□□□□ 0.3
FOXN4-204ENST00000468516 USP31Q70CQ4 1352 aa16.92■□□□□ 0.3
FOXN4-204ENST00000468516 SLC26A8Q96RN1 970 aa16.92■□□□□ 0.3
FOXN4-204ENST00000468516 RGPD1P0DJD0 1748 aa16.92■□□□□ 0.3
FOXN4-204ENST00000468516 TTC21BQ7Z4L5 1316 aa16.91■□□□□ 0.3
FOXN4-204ENST00000468516 BCAR3O75815 825 aa16.91■□□□□ 0.3
FOXN4-204ENST00000468516 MS4A1P11836 297 aa16.91■□□□□ 0.3
FOXN4-204ENST00000468516 RARSP54136 660 aaKnown RBP16.91■□□□□ 0.3
FOXN4-204ENST00000468516 AAMPQ13685 434 aa16.91■□□□□ 0.3
FOXN4-204ENST00000468516 NEUROD2Q15784 382 aa16.91■□□□□ 0.3
FOXN4-204ENST00000468516 RGPD8O14715 1765 aaPredicted RBP16.9■□□□□ 0.3
FOXN4-204ENST00000468516 NCKAP5LQ9HCH0 1330 aa16.9■□□□□ 0.3
FOXN4-204ENST00000468516 IL13P35225 146 aa16.9■□□□□ 0.3
FOXN4-204ENST00000468516 ACEP12821 1306 aa16.9■□□□□ 0.3
FOXN4-204ENST00000468516 TTC21AQ8NDW8 1320 aa16.9■□□□□ 0.3
FOXN4-204ENST00000468516 CENPQQ7L2Z9 268 aaPredicted RBP16.89■□□□□ 0.3
FOXN4-204ENST00000468516 SETD1BQ9UPS6 1966 aaKnown RBP16.89■□□□□ 0.29
FOXN4-204ENST00000468516 PEAK1Q9H792 1746 aa16.89■□□□□ 0.29
FOXN4-204ENST00000468516 EMILIN1Q9Y6C2 1016 aa16.88■□□□□ 0.29
FOXN4-204ENST00000468516 DLG5Q8TDM6 1919 aa16.87■□□□□ 0.29
FOXN4-204ENST00000468516 PIK3C2AO00443 1686 aa16.87■□□□□ 0.29
FOXN4-204ENST00000468516 ZRANB1Q9UGI0 708 aa16.86■□□□□ 0.29
FOXN4-204ENST00000468516 MARF1Q9Y4F3 1742 aaKnown RBP16.86■□□□□ 0.29
FOXN4-204ENST00000468516 PRKAR2BP31323 418 aa16.85■□□□□ 0.29
FOXN4-204ENST00000468516 RIPK4P57078 832 aa16.85■□□□□ 0.29
FOXN4-204ENST00000468516 NFE2L2Q16236 605 aa16.85■□□□□ 0.29
FOXN4-204ENST00000468516 NEFMP07197 916 aa16.84■□□□□ 0.29
FOXN4-204ENST00000468516 NWD1Q149M9 1564 aa16.83■□□□□ 0.28
FOXN4-204ENST00000468516 FBLN1P23142 703 aa16.82■□□□□ 0.28
FOXN4-204ENST00000468516 CALD1Q05682 793 aaKnown RBP16.82■□□□□ 0.28
FOXN4-204ENST00000468516 ZNF428Q96B54 188 aa16.81■□□□□ 0.28
FOXN4-204ENST00000468516 PPM1GO15355 546 aaPredicted RBP16.81■□□□□ 0.28
FOXN4-204ENST00000468516 ANKLE2Q86XL3 938 aa16.81■□□□□ 0.28
FOXN4-204ENST00000468516 KIF24Q5T7B8 1368 aa16.8■□□□□ 0.28
FOXN4-204ENST00000468516 KCNA6P17658 529 aa16.8■□□□□ 0.28
FOXN4-204ENST00000468516 CANXP27824 592 aaKnown RBP16.8■□□□□ 0.28
FOXN4-204ENST00000468516 LMOD3Q0VAK6 560 aa16.8■□□□□ 0.28
FOXN4-204ENST00000468516 RRS1Q15050 365 aaKnown RBP16.8■□□□□ 0.28
FOXN4-204ENST00000468516 CLUAP1Q96AJ1 413 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms