RNA–Protein interactions for RNA: ENST00000468397.1

CDK11A-212, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-212ENST00000468397 TMC1Q8TDI8 760 aa23.14■■□□□ 1.29
CDK11A-212ENST00000468397 USP6P35125 1406 aa23.14■■□□□ 1.29
CDK11A-212ENST00000468397 ZNF692Q9BU19 519 aaPredicted RBP23.13■■□□□ 1.29
CDK11A-212ENST00000468397 MON2Q7Z3U7 1717 aa23.11■■□□□ 1.29
CDK11A-212ENST00000468397 ABCA3Q99758 1704 aa23.11■■□□□ 1.29
CDK11A-212ENST00000468397 CPSF1Q10570 1443 aaKnown RBP23.1■■□□□ 1.29
CDK11A-212ENST00000468397 HAP1P54257 671 aaPredicted RBP23.1■■□□□ 1.29
CDK11A-212ENST00000468397 HDGFL2Q7Z4V5 671 aaPredicted RBP23.09■■□□□ 1.29
CDK11A-212ENST00000468397 TERF2IPQ9NYB0 399 aa23.09■■□□□ 1.29
CDK11A-212ENST00000468397 KTN1Q86UP2 1357 aaKnown RBP23.09■■□□□ 1.29
CDK11A-212ENST00000468397 MARF1Q9Y4F3 1742 aaKnown RBP23.08■■□□□ 1.29
CDK11A-212ENST00000468397 ADAMTS2O95450 1211 aa23.08■■□□□ 1.29
CDK11A-212ENST00000468397 SLC12A5Q9H2X9 1139 aa23.08■■□□□ 1.29
CDK11A-212ENST00000468397 NRKQ7Z2Y5 1582 aa23.07■■□□□ 1.28
CDK11A-212ENST00000468397 CD163L1Q9NR16 1453 aa23.07■■□□□ 1.28
CDK11A-212ENST00000468397 ABTB2Q8N961 1025 aa23.06■■□□□ 1.28
CDK11A-212ENST00000468397 SSH2Q76I76 1423 aa23.06■■□□□ 1.28
CDK11A-212ENST00000468397 CRYBG1Q9Y4K1 1723 aa23.05■■□□□ 1.28
CDK11A-212ENST00000468397 PLEKHG5O94827 1062 aa23.05■■□□□ 1.28
CDK11A-212ENST00000468397 A0A1W2PP64 1363 aa23.04■■□□□ 1.28
CDK11A-212ENST00000468397 CABLES1Q8TDN4 633 aa23.04■■□□□ 1.28
CDK11A-212ENST00000468397 C8orf37Q96NL8 207 aa23.04■■□□□ 1.28
CDK11A-212ENST00000468397 TTC21AQ8NDW8 1320 aa23.04■■□□□ 1.28
CDK11A-212ENST00000468397 TTC21BQ7Z4L5 1316 aa23.03■■□□□ 1.28
CDK11A-212ENST00000468397 PIK3C2AO00443 1686 aa23.03■■□□□ 1.28
CDK11A-212ENST00000468397 MYOM1P52179 1685 aa23.03■■□□□ 1.28
CDK11A-212ENST00000468397 EDC4Q6P2E9 1401 aaKnown RBP23.02■■□□□ 1.28
CDK11A-212ENST00000468397 PHRF1Q9P1Y6 1649 aaKnown RBP23.02■■□□□ 1.28
CDK11A-212ENST00000468397 NUTM2GQ5VZR2 741 aa23.02■■□□□ 1.28
CDK11A-212ENST00000468397 ANKRD36BQ8N2N9 1353 aa23.01■■□□□ 1.27
CDK11A-212ENST00000468397 NLRP13Q86W25 1043 aa23.01■■□□□ 1.27
CDK11A-212ENST00000468397 NGLY1Q96IV0 654 aa23.01■■□□□ 1.27
CDK11A-212ENST00000468397 POLR3GLQ9BT43 218 aa23■■□□□ 1.27
CDK11A-212ENST00000468397 AFF2P51816 1311 aa23■■□□□ 1.27
CDK11A-212ENST00000468397 ZNF772Q68DY9 489 aaPredicted RBP22.99■■□□□ 1.27
CDK11A-212ENST00000468397 USP19O94966 1318 aa22.98■■□□□ 1.27
CDK11A-212ENST00000468397 NLRP6P59044 892 aa22.97■■□□□ 1.27
CDK11A-212ENST00000468397 RGS17Q9UGC6 210 aaPredicted RBP22.97■■□□□ 1.27
CDK11A-212ENST00000468397 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.96■■□□□ 1.27
CDK11A-212ENST00000468397 COL14A1Q05707 1796 aaKnown RBP22.94■■□□□ 1.26
CDK11A-212ENST00000468397 PLCH1Q4KWH8 1693 aa22.93■■□□□ 1.26
CDK11A-212ENST00000468397 USP54Q70EL1 1684 aa22.93■■□□□ 1.26
CDK11A-212ENST00000468397 SLIT3O75094 1523 aa22.93■■□□□ 1.26
CDK11A-212ENST00000468397 ZEB1P37275 1124 aaPredicted RBP22.93■■□□□ 1.26
CDK11A-212ENST00000468397 FNBP4Q8N3X1 1017 aaPredicted RBP22.93■■□□□ 1.26
CDK11A-212ENST00000468397 NWD2Q9ULI1 1742 aa22.92■■□□□ 1.26
CDK11A-212ENST00000468397 USP31Q70CQ4 1352 aa22.91■■□□□ 1.26
CDK11A-212ENST00000468397 PRDM11Q9NQV5 511 aa22.91■■□□□ 1.26
CDK11A-212ENST00000468397 USP21Q9UK80 565 aa22.91■■□□□ 1.26
CDK11A-212ENST00000468397 SLIT2O94813 1529 aa22.91■■□□□ 1.26
CDK11A-212ENST00000468397 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.91■■□□□ 1.26
CDK11A-212ENST00000468397 C11orf95C9JLR9 678 aaPredicted RBP22.9■■□□□ 1.26
CDK11A-212ENST00000468397 GCP02774 474 aa22.9■■□□□ 1.26
CDK11A-212ENST00000468397 NME9Q86XW9 330 aa22.9■■□□□ 1.26
CDK11A-212ENST00000468397 KIAA0232Q92628 1395 aa22.89■■□□□ 1.26
CDK11A-212ENST00000468397 POTEAQ6S8J7 498 aa22.89■■□□□ 1.25
CDK11A-212ENST00000468397 CPDO75976 1380 aa22.89■■□□□ 1.25
CDK11A-212ENST00000468397 KIF7Q2M1P5 1343 aa22.88■■□□□ 1.25
CDK11A-212ENST00000468397 SOCS7O14512 581 aa22.88■■□□□ 1.25
CDK11A-212ENST00000468397 ZC3H6P61129 1189 aaKnown RBP22.88■■□□□ 1.25
CDK11A-212ENST00000468397 KCNH5Q8NCM2 988 aa22.88■■□□□ 1.25
CDK11A-212ENST00000468397 KIF20BQ96Q89 1820 aa22.87■■□□□ 1.25
CDK11A-212ENST00000468397 BCL9LQ86UU0 1499 aa22.87■■□□□ 1.25
CDK11A-212ENST00000468397 FAM83GA6ND36 823 aa22.87■■□□□ 1.25
CDK11A-212ENST00000468397 NSD3Q9BZ95 1437 aa22.87■■□□□ 1.25
CDK11A-212ENST00000468397 OVOS2A0A0J9YW53 1432 aa22.86■■□□□ 1.25
CDK11A-212ENST00000468397 OVOS2Q6IE36 1432 aa22.86■■□□□ 1.25
CDK11A-212ENST00000468397 UNC5CLQ8IV45 518 aa22.85■■□□□ 1.25
CDK11A-212ENST00000468397 QTRT2Q9H974 415 aaKnown RBP22.85■■□□□ 1.25
CDK11A-212ENST00000468397 ZRANB1Q9UGI0 708 aa22.85■■□□□ 1.25
CDK11A-212ENST00000468397 TRPC5Q9UL62 973 aaPredicted RBP22.85■■□□□ 1.25
CDK11A-212ENST00000468397 NRAPQ86VF7 1730 aa22.85■■□□□ 1.25
CDK11A-212ENST00000468397 ATRNO75882 1429 aa22.84■■□□□ 1.25
CDK11A-212ENST00000468397 NFAT5O94916 1531 aa22.84■■□□□ 1.25
CDK11A-212ENST00000468397 COG3Q96JB2 828 aa22.84■■□□□ 1.25
CDK11A-212ENST00000468397 CHRNA2Q15822 529 aa22.83■■□□□ 1.25
CDK11A-212ENST00000468397 CARD14Q9BXL6 1004 aa22.83■■□□□ 1.25
CDK11A-212ENST00000468397 BTG4Q9NY30 223 aa22.83■■□□□ 1.25
CDK11A-212ENST00000468397 CCDC7Q96M83 1385 aa22.83■■□□□ 1.25
CDK11A-212ENST00000468397 SOX12O15370 315 aa22.82■■□□□ 1.24
CDK11A-212ENST00000468397 ZBTB7CA1YPR0 619 aa22.81■■□□□ 1.24
CDK11A-212ENST00000468397 RXRBP28702 533 aa22.81■■□□□ 1.24
CDK11A-212ENST00000468397 PANK3Q9H999 370 aa22.81■■□□□ 1.24
CDK11A-212ENST00000468397 CGNL1Q0VF96 1302 aa22.81■■□□□ 1.24
CDK11A-212ENST00000468397 LMO7Q8WWI1 1683 aa22.81■■□□□ 1.24
CDK11A-212ENST00000468397 RBM6P78332 1123 aaKnown RBP22.8■■□□□ 1.24
CDK11A-212ENST00000468397 AATKQ6ZMQ8 1374 aa22.79■■□□□ 1.24
CDK11A-212ENST00000468397 FYB1O15117 783 aa22.79■■□□□ 1.24
CDK11A-212ENST00000468397 WASHC2AQ641Q2 1341 aa22.79■■□□□ 1.24
CDK11A-212ENST00000468397 GGNBP2Q9H3C7 697 aa22.78■■□□□ 1.24
CDK11A-212ENST00000468397 LTN1O94822 1766 aa22.78■■□□□ 1.24
CDK11A-212ENST00000468397 ABCC6O95255 1503 aa22.77■■□□□ 1.24
CDK11A-212ENST00000468397 VPS72Q15906 364 aa22.77■■□□□ 1.24
CDK11A-212ENST00000468397 ARHGEF25Q86VW2 580 aa22.77■■□□□ 1.24
CDK11A-212ENST00000468397 CDK12Q9NYV4 1490 aaPredicted RBP22.77■■□□□ 1.24
CDK11A-212ENST00000468397 CCDC9Q9Y3X0 531 aaKnown RBP22.76■■□□□ 1.23
CDK11A-212ENST00000468397 CAMTA1Q9Y6Y1 1673 aa22.76■■□□□ 1.23
CDK11A-212ENST00000468397 COL18A1P39060 1754 aa22.76■■□□□ 1.23
CDK11A-212ENST00000468397 GJD4Q96KN9 370 aaPredicted RBP22.75■■□□□ 1.23
CDK11A-212ENST00000468397 ANKRD26Q9UPS8 1709 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms