RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 ACEP12821 1306 aa20.74■□□□□ 0.91
COMMD3-206ENST00000468179 POLR3AO14802 1390 aaPredicted RBP20.74■□□□□ 0.91
COMMD3-206ENST00000468179 CABLES1Q8TDN4 633 aa20.73■□□□□ 0.91
COMMD3-206ENST00000468179 CLSPNQ9HAW4 1339 aa20.72■□□□□ 0.91
COMMD3-206ENST00000468179 PLEKHG5O94827 1062 aa20.72■□□□□ 0.91
COMMD3-206ENST00000468179 PCGF6Q9BYE7 350 aa20.72■□□□□ 0.91
COMMD3-206ENST00000468179 UNC5CLQ8IV45 518 aa20.71■□□□□ 0.91
COMMD3-206ENST00000468179 QRICH2Q9H0J4 1663 aa20.71■□□□□ 0.91
COMMD3-206ENST00000468179 PPIP5K1Q6PFW1 1433 aa20.71■□□□□ 0.91
COMMD3-206ENST00000468179 BRD4O60885 1362 aaPredicted RBP20.7■□□□□ 0.9
COMMD3-206ENST00000468179 TIMELESSQ9UNS1 1208 aa20.7■□□□□ 0.9
COMMD3-206ENST00000468179 RALGAPBQ86X10 1494 aa20.69■□□□□ 0.9
COMMD3-206ENST00000468179 ATRNO75882 1429 aa20.68■□□□□ 0.9
COMMD3-206ENST00000468179 SLC24A1O60721 1099 aa20.68■□□□□ 0.9
COMMD3-206ENST00000468179 CABP1Q9NZU7 370 aa20.68■□□□□ 0.9
COMMD3-206ENST00000468179 BCL9LQ86UU0 1499 aa20.68■□□□□ 0.9
COMMD3-206ENST00000468179 TRPM3Q9HCF6 1732 aaPredicted RBP20.68■□□□□ 0.9
COMMD3-206ENST00000468179 MARF1Q9Y4F3 1742 aaKnown RBP20.67■□□□□ 0.9
COMMD3-206ENST00000468179 SBNO2Q9Y2G9 1366 aa20.67■□□□□ 0.9
COMMD3-206ENST00000468179 TOPAZ1Q8N9V7 1692 aa20.66■□□□□ 0.9
COMMD3-206ENST00000468179 SLIT2O94813 1529 aa20.66■□□□□ 0.9
COMMD3-206ENST00000468179 GJD4Q96KN9 370 aaPredicted RBP20.66■□□□□ 0.9
COMMD3-206ENST00000468179 ABTB2Q8N961 1025 aa20.65■□□□□ 0.9
COMMD3-206ENST00000468179 ZNF692Q9BU19 519 aaPredicted RBP20.65■□□□□ 0.9
COMMD3-206ENST00000468179 ALS2Q96Q42 1657 aa20.65■□□□□ 0.9
COMMD3-206ENST00000468179 ATAD2Q6PL18 1390 aa20.65■□□□□ 0.9
COMMD3-206ENST00000468179 FAM83GA6ND36 823 aa20.64■□□□□ 0.89
COMMD3-206ENST00000468179 NPM3O75607 178 aaKnown RBP20.63■□□□□ 0.89
COMMD3-206ENST00000468179 NLRP13Q86W25 1043 aa20.63■□□□□ 0.89
COMMD3-206ENST00000468179 CACNB1Q02641 598 aaPredicted RBP20.62■□□□□ 0.89
COMMD3-206ENST00000468179 VPS72Q15906 364 aa20.62■□□□□ 0.89
COMMD3-206ENST00000468179 RGS12O14924 1447 aa20.62■□□□□ 0.89
COMMD3-206ENST00000468179 PRDM11Q9NQV5 511 aa20.61■□□□□ 0.89
COMMD3-206ENST00000468179 CCDC9Q9Y3X0 531 aaKnown RBP20.6■□□□□ 0.89
COMMD3-206ENST00000468179 NUTM2GQ5VZR2 741 aa20.59■□□□□ 0.89
COMMD3-206ENST00000468179 PUS7Q96PZ0 661 aaKnown RBP20.59■□□□□ 0.89
COMMD3-206ENST00000468179 BTG4Q9NY30 223 aa20.59■□□□□ 0.89
COMMD3-206ENST00000468179 USP6P35125 1406 aa20.59■□□□□ 0.89
COMMD3-206ENST00000468179 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.58■□□□□ 0.89
COMMD3-206ENST00000468179 ABCA3Q99758 1704 aa20.58■□□□□ 0.88
COMMD3-206ENST00000468179 CCER1Q8TC90 406 aaPredicted RBP20.57■□□□□ 0.88
COMMD3-206ENST00000468179 UPF1Q92900 1129 aaKnown RBP eCLIP20.57■□□□□ 0.88
COMMD3-206ENST00000468179 NWD2Q9ULI1 1742 aa20.55■□□□□ 0.88
COMMD3-206ENST00000468179 ST20-MTHFSA0A0A6YYL1 179 aa20.55■□□□□ 0.88
COMMD3-206ENST00000468179 NLRP6P59044 892 aa20.55■□□□□ 0.88
COMMD3-206ENST00000468179 ZC3H6P61129 1189 aaKnown RBP20.55■□□□□ 0.88
COMMD3-206ENST00000468179 KIAA0232Q92628 1395 aa20.55■□□□□ 0.88
COMMD3-206ENST00000468179 USP19O94966 1318 aa20.55■□□□□ 0.88
COMMD3-206ENST00000468179 COL14A1Q05707 1796 aaKnown RBP20.54■□□□□ 0.88
COMMD3-206ENST00000468179 TTC21AQ8NDW8 1320 aa20.54■□□□□ 0.88
COMMD3-206ENST00000468179 GCP02774 474 aa20.53■□□□□ 0.88
COMMD3-206ENST00000468179 HDGFL2Q7Z4V5 671 aaPredicted RBP20.53■□□□□ 0.88
COMMD3-206ENST00000468179 TMC1Q8TDI8 760 aa20.53■□□□□ 0.88
COMMD3-206ENST00000468179 PLCH1Q4KWH8 1693 aa20.52■□□□□ 0.88
COMMD3-206ENST00000468179 KTN1Q86UP2 1357 aaKnown RBP20.52■□□□□ 0.88
COMMD3-206ENST00000468179 TTC21BQ7Z4L5 1316 aa20.52■□□□□ 0.88
COMMD3-206ENST00000468179 CPSF1Q10570 1443 aaKnown RBP20.52■□□□□ 0.87
COMMD3-206ENST00000468179 ONECUT3O60422 494 aaPredicted RBP20.52■□□□□ 0.87
COMMD3-206ENST00000468179 RNF39Q9H2S5 420 aa20.52■□□□□ 0.87
COMMD3-206ENST00000468179 TERF2IPQ9NYB0 399 aa20.52■□□□□ 0.87
COMMD3-206ENST00000468179 CPDO75976 1380 aa20.51■□□□□ 0.87
COMMD3-206ENST00000468179 SSH2Q76I76 1423 aa20.51■□□□□ 0.87
COMMD3-206ENST00000468179 EVA1CP58658 441 aa20.51■□□□□ 0.87
COMMD3-206ENST00000468179 CHRNA2Q15822 529 aa20.51■□□□□ 0.87
COMMD3-206ENST00000468179 CRYBG1Q9Y4K1 1723 aa20.5■□□□□ 0.87
COMMD3-206ENST00000468179 SEPT12Q8IYM1 358 aa20.5■□□□□ 0.87
COMMD3-206ENST00000468179 KCNH5Q8NCM2 988 aa20.5■□□□□ 0.87
COMMD3-206ENST00000468179 TESK2Q96S53 571 aa20.5■□□□□ 0.87
COMMD3-206ENST00000468179 USP47Q96K76 1375 aa20.49■□□□□ 0.87
COMMD3-206ENST00000468179 NINLQ9Y2I6 1382 aa20.49■□□□□ 0.87
COMMD3-206ENST00000468179 TMF1P82094 1093 aa20.49■□□□□ 0.87
COMMD3-206ENST00000468179 GLI3P10071 1580 aa20.48■□□□□ 0.87
COMMD3-206ENST00000468179 A0A0G2JS52 829 aa20.48■□□□□ 0.87
COMMD3-206ENST00000468179 MYT1Q01538 1121 aa20.48■□□□□ 0.87
COMMD3-206ENST00000468179 CDCA8Q53HL2 280 aa20.48■□□□□ 0.87
COMMD3-206ENST00000468179 CCDC125Q86Z20 511 aa20.48■□□□□ 0.87
COMMD3-206ENST00000468179 PHRF1Q9P1Y6 1649 aaKnown RBP20.48■□□□□ 0.87
COMMD3-206ENST00000468179 SPATA31A5Q5VU36 1347 aa20.47■□□□□ 0.87
COMMD3-206ENST00000468179 SPATA31A7Q8IWB4 1347 aa20.47■□□□□ 0.87
COMMD3-206ENST00000468179 SLC12A5Q9H2X9 1139 aa20.47■□□□□ 0.87
COMMD3-206ENST00000468179 STRN4Q9NRL3 753 aa20.47■□□□□ 0.87
COMMD3-206ENST00000468179 FAM98CQ17RN3 349 aaKnown RBP20.45■□□□□ 0.86
COMMD3-206ENST00000468179 NRKQ7Z2Y5 1582 aa20.45■□□□□ 0.86
COMMD3-206ENST00000468179 NRAPQ86VF7 1730 aa20.43■□□□□ 0.86
COMMD3-206ENST00000468179 ZBTB7CA1YPR0 619 aa20.43■□□□□ 0.86
COMMD3-206ENST00000468179 KRT27Q7Z3Y8 459 aa20.43■□□□□ 0.86
COMMD3-206ENST00000468179 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.43■□□□□ 0.86
COMMD3-206ENST00000468179 SPATA31A1Q5TZJ5 1347 aa20.43■□□□□ 0.86
COMMD3-206ENST00000468179 AKAP12Q02952 1782 aa20.43■□□□□ 0.86
COMMD3-206ENST00000468179 AATKQ6ZMQ8 1374 aa20.42■□□□□ 0.86
COMMD3-206ENST00000468179 SLIT3O75094 1523 aa20.42■□□□□ 0.86
COMMD3-206ENST00000468179 EDC4Q6P2E9 1401 aaKnown RBP20.41■□□□□ 0.86
COMMD3-206ENST00000468179 USP31Q70CQ4 1352 aa20.4■□□□□ 0.86
COMMD3-206ENST00000468179 PIK3C2AO00443 1686 aa20.39■□□□□ 0.85
COMMD3-206ENST00000468179 THRAP3Q9Y2W1 955 aaKnown RBP20.39■□□□□ 0.85
COMMD3-206ENST00000468179 CD163L1Q9NR16 1453 aa20.39■□□□□ 0.85
COMMD3-206ENST00000468179 BARGINQ6ZT62 677 aa20.38■□□□□ 0.85
COMMD3-206ENST00000468179 ARHGEF25Q86VW2 580 aa20.38■□□□□ 0.85
COMMD3-206ENST00000468179 A0A1W2PP64 1363 aa20.38■□□□□ 0.85
COMMD3-206ENST00000468179 CAMTA1Q9Y6Y1 1673 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms