RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 NGDNQ8NEJ9 315 aaKnown RBP27.51■■■□□ 2
TMEM53-207ENST00000468117 ZRANB1Q9UGI0 708 aa27.51■■■□□ 2
TMEM53-207ENST00000468117 INSRP06213 1382 aa27.51■■□□□ 1.99
TMEM53-207ENST00000468117 MAP2P11137 1827 aaKnown RBP27.5■■□□□ 1.99
TMEM53-207ENST00000468117 TTC21BQ7Z4L5 1316 aa27.5■■□□□ 1.99
TMEM53-207ENST00000468117 SSH2Q76I76 1423 aa27.47■■□□□ 1.99
TMEM53-207ENST00000468117 CFAP53Q96M91 514 aa27.46■■□□□ 1.99
TMEM53-207ENST00000468117 FBLN1P23142 703 aa27.46■■□□□ 1.99
TMEM53-207ENST00000468117 COG3Q96JB2 828 aa27.46■■□□□ 1.99
TMEM53-207ENST00000468117 GTF3C3Q9Y5Q9 886 aa27.45■■□□□ 1.99
TMEM53-207ENST00000468117 TMEM94Q12767 1356 aa27.44■■□□□ 1.98
TMEM53-207ENST00000468117 SCAF1Q9H7N4 1312 aaKnown RBP27.44■■□□□ 1.98
TMEM53-207ENST00000468117 PHF8Q9UPP1 1060 aa27.43■■□□□ 1.98
TMEM53-207ENST00000468117 SALL2Q9Y467 1007 aaPredicted RBP27.43■■□□□ 1.98
TMEM53-207ENST00000468117 C19orf44Q9H6X5 657 aa27.41■■□□□ 1.98
TMEM53-207ENST00000468117 ESCO1Q5FWF5 840 aa27.41■■□□□ 1.98
TMEM53-207ENST00000468117 TTC21AQ8NDW8 1320 aa27.4■■□□□ 1.98
TMEM53-207ENST00000468117 POLKQ9UBT6 870 aa27.4■■□□□ 1.98
TMEM53-207ENST00000468117 OVOS2A0A0J9YW53 1432 aa27.39■■□□□ 1.98
TMEM53-207ENST00000468117 OVOS2Q6IE36 1432 aa27.39■■□□□ 1.98
TMEM53-207ENST00000468117 CCDC146Q8IYE0 955 aa27.39■■□□□ 1.98
TMEM53-207ENST00000468117 COL3A1P02461 1466 aaPredicted RBP27.39■■□□□ 1.97
TMEM53-207ENST00000468117 PIK3C2AO00443 1686 aa27.38■■□□□ 1.97
TMEM53-207ENST00000468117 XIRP1Q702N8 1843 aaKnown RBP27.38■■□□□ 1.97
TMEM53-207ENST00000468117 AATKQ6ZMQ8 1374 aa27.36■■□□□ 1.97
TMEM53-207ENST00000468117 PPM1GO15355 546 aaPredicted RBP27.36■■□□□ 1.97
TMEM53-207ENST00000468117 ORAI2Q96SN7 254 aa27.36■■□□□ 1.97
TMEM53-207ENST00000468117 EMILIN1Q9Y6C2 1016 aa27.35■■□□□ 1.97
TMEM53-207ENST00000468117 NCOA3Q9Y6Q9 1424 aa27.35■■□□□ 1.97
TMEM53-207ENST00000468117 PNPLA6Q8IY17 1366 aa27.35■■□□□ 1.97
TMEM53-207ENST00000468117 ZNF335Q9H4Z2 1342 aaPredicted RBP27.34■■□□□ 1.97
TMEM53-207ENST00000468117 RRS1Q15050 365 aaKnown RBP27.33■■□□□ 1.96
TMEM53-207ENST00000468117 C1orf167Q5SNV9 1468 aa27.32■■□□□ 1.96
TMEM53-207ENST00000468117 ATF3P18847 181 aa27.32■■□□□ 1.96
TMEM53-207ENST00000468117 SMG6Q86US8 1419 aaKnown RBP27.32■■□□□ 1.96
TMEM53-207ENST00000468117 PAK3O75914 559 aaPredicted RBP27.31■■□□□ 1.96
TMEM53-207ENST00000468117 DCCP43146 1447 aa27.31■■□□□ 1.96
TMEM53-207ENST00000468117 U2AF1L5P0DN76 240 aaPredicted RBP27.3■■□□□ 1.96
TMEM53-207ENST00000468117 U2AF1Q01081 240 aaKnown RBP eCLIP27.3■■□□□ 1.96
TMEM53-207ENST00000468117 MARF1Q9Y4F3 1742 aaKnown RBP27.3■■□□□ 1.96
TMEM53-207ENST00000468117 DIAPH1O60610 1272 aaKnown RBP27.29■■□□□ 1.96
TMEM53-207ENST00000468117 PSME1Q06323 249 aa27.29■■□□□ 1.96
TMEM53-207ENST00000468117 USP31Q70CQ4 1352 aa27.29■■□□□ 1.96
TMEM53-207ENST00000468117 CDK12Q9NYV4 1490 aaPredicted RBP27.29■■□□□ 1.96
TMEM53-207ENST00000468117 APAF1O14727 1248 aa27.29■■□□□ 1.96
TMEM53-207ENST00000468117 NUDCQ9Y266 331 aa27.29■■□□□ 1.96
TMEM53-207ENST00000468117 MST1RQ04912 1400 aa27.28■■□□□ 1.96
TMEM53-207ENST00000468117 U2SURPO15042 1029 aaKnown RBP27.28■■□□□ 1.96
TMEM53-207ENST00000468117 LRRC7Q96NW7 1537 aa27.28■■□□□ 1.96
TMEM53-207ENST00000468117 SOX12O15370 315 aa27.28■■□□□ 1.96
TMEM53-207ENST00000468117 FOXO3O43524 673 aa27.28■■□□□ 1.96
TMEM53-207ENST00000468117 NLRP6P59044 892 aa27.28■■□□□ 1.96
TMEM53-207ENST00000468117 KIF1AQ12756 1690 aa27.27■■□□□ 1.96
TMEM53-207ENST00000468117 NUTM2GQ5VZR2 741 aa27.27■■□□□ 1.96
TMEM53-207ENST00000468117 ABTB2Q8N961 1025 aa27.27■■□□□ 1.96
TMEM53-207ENST00000468117 MSH6P52701 1360 aa27.27■■□□□ 1.96
TMEM53-207ENST00000468117 USP54Q70EL1 1684 aa27.26■■□□□ 1.95
TMEM53-207ENST00000468117 CADPS2Q86UW7 1296 aa27.24■■□□□ 1.95
TMEM53-207ENST00000468117 RUNDC1Q96C34 613 aa27.24■■□□□ 1.95
TMEM53-207ENST00000468117 XPCQ01831 940 aaPredicted RBP27.23■■□□□ 1.95
TMEM53-207ENST00000468117 DMRT2Q9Y5R5 561 aa27.23■■□□□ 1.95
TMEM53-207ENST00000468117 PEAK1Q9H792 1746 aa27.23■■□□□ 1.95
TMEM53-207ENST00000468117 PDE3BQ13370 1112 aa27.22■■□□□ 1.95
TMEM53-207ENST00000468117 CDCA7LQ96GN5 454 aa27.21■■□□□ 1.95
TMEM53-207ENST00000468117 SUPT16HQ9Y5B9 1047 aaKnown RBP27.19■■□□□ 1.94
TMEM53-207ENST00000468117 TRPM3Q9HCF6 1732 aaPredicted RBP27.19■■□□□ 1.94
TMEM53-207ENST00000468117 IQSEC2Q5JU85 1478 aa27.19■■□□□ 1.94
TMEM53-207ENST00000468117 IL13P35225 146 aa27.18■■□□□ 1.94
TMEM53-207ENST00000468117 TCP11L2Q8N4U5 519 aa27.18■■□□□ 1.94
TMEM53-207ENST00000468117 ZNF521Q96K83 1311 aa27.18■■□□□ 1.94
TMEM53-207ENST00000468117 MAP3K19Q56UN5 1328 aa27.17■■□□□ 1.94
TMEM53-207ENST00000468117 KRT28Q7Z3Y7 464 aa27.16■■□□□ 1.94
TMEM53-207ENST00000468117 RRP7AQ9Y3A4 280 aaKnown RBP27.16■■□□□ 1.94
TMEM53-207ENST00000468117 NEUROD2Q15784 382 aa27.15■■□□□ 1.94
TMEM53-207ENST00000468117 PLEKHF1Q96S99 279 aa27.15■■□□□ 1.94
TMEM53-207ENST00000468117 HSP90AB2PQ58FF8 381 aa27.14■■□□□ 1.93
TMEM53-207ENST00000468117 NGEFQ8N5V2 710 aa27.13■■□□□ 1.93
TMEM53-207ENST00000468117 DDX17Q92841 729 aaKnown RBP27.13■■□□□ 1.93
TMEM53-207ENST00000468117 LTN1O94822 1766 aa27.12■■□□□ 1.93
TMEM53-207ENST00000468117 SBNO1A3KN83 1393 aa27.11■■□□□ 1.93
TMEM53-207ENST00000468117 HMOX1P09601 288 aa27.11■■□□□ 1.93
TMEM53-207ENST00000468117 FCHSD2O94868 740 aa27.11■■□□□ 1.93
TMEM53-207ENST00000468117 GOLGA2Q08379 1002 aa27.11■■□□□ 1.93
TMEM53-207ENST00000468117 EIF4A2Q14240 407 aaKnown RBP27.11■■□□□ 1.93
TMEM53-207ENST00000468117 LMOD2Q6P5Q4 547 aa27.11■■□□□ 1.93
TMEM53-207ENST00000468117 FLT4P35916 1363 aa27.1■■□□□ 1.93
TMEM53-207ENST00000468117 RSPH6AQ9H0K4 717 aa27.1■■□□□ 1.93
TMEM53-207ENST00000468117 MAPK8IP3Q9UPT6 1336 aa27.09■■□□□ 1.93
TMEM53-207ENST00000468117 AMPHP49418 695 aa27.09■■□□□ 1.93
TMEM53-207ENST00000468117 ALS2Q96Q42 1657 aa27.09■■□□□ 1.93
TMEM53-207ENST00000468117 WWC1Q8IX03 1113 aa27.09■■□□□ 1.93
TMEM53-207ENST00000468117 PNNQ9H307 717 aaKnown RBP27.08■■□□□ 1.93
TMEM53-207ENST00000468117 NFAT5O94916 1531 aa27.08■■□□□ 1.93
TMEM53-207ENST00000468117 PRKAR2BP31323 418 aa27.07■■□□□ 1.92
TMEM53-207ENST00000468117 NEFLP07196 543 aa27.07■■□□□ 1.92
TMEM53-207ENST00000468117 NPHP3Q7Z494 1330 aa27.06■■□□□ 1.92
TMEM53-207ENST00000468117 PLEKHG5O94827 1062 aa27.06■■□□□ 1.92
TMEM53-207ENST00000468117 FKBP8Q14318 412 aa27.06■■□□□ 1.92
TMEM53-207ENST00000468117 BRINP3Q76B58 766 aa27.06■■□□□ 1.92
TMEM53-207ENST00000468117 SLAIN2Q9P270 581 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms