RNA–Protein interactions for RNA: ENST00000467869.5

ELL3-203, Transcript of elongation factor for RNA polymerase II 3, humanhuman

TSL 2

Gene ELL3, Length 1,769 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-203ENST00000467869 XIRP1Q702N8 1843 aaKnown RBP22.17■■□□□ 1.14
ELL3-203ENST00000467869 PRKCSHP14314 528 aaPredicted RBP22.16■■□□□ 1.14
ELL3-203ENST00000467869 NGDNQ8NEJ9 315 aaKnown RBP22.16■■□□□ 1.14
ELL3-203ENST00000467869 PMFBP1Q8TBY8 1022 aa22.16■■□□□ 1.14
ELL3-203ENST00000467869 HNRNPUQ00839 825 aaKnown RBP eCLIP22.15■■□□□ 1.14
ELL3-203ENST00000467869 CADPS2Q86UW7 1296 aa22.15■■□□□ 1.14
ELL3-203ENST00000467869 POLR3AO14802 1390 aaPredicted RBP22.14■■□□□ 1.13
ELL3-203ENST00000467869 KIF20BQ96Q89 1820 aa22.14■■□□□ 1.13
ELL3-203ENST00000467869 PHF8Q9UPP1 1060 aa22.13■■□□□ 1.13
ELL3-203ENST00000467869 ESCO1Q5FWF5 840 aa22.12■■□□□ 1.13
ELL3-203ENST00000467869 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.12■■□□□ 1.13
ELL3-203ENST00000467869 USP6P35125 1406 aa22.12■■□□□ 1.13
ELL3-203ENST00000467869 C1orf167Q5SNV9 1468 aa22.12■■□□□ 1.13
ELL3-203ENST00000467869 MORC1Q86VD1 984 aa22.12■■□□□ 1.13
ELL3-203ENST00000467869 MST1RQ04912 1400 aa22.11■■□□□ 1.13
ELL3-203ENST00000467869 NRKQ7Z2Y5 1582 aa22.1■■□□□ 1.13
ELL3-203ENST00000467869 NOP58Q9Y2X3 529 aaKnown RBP22.1■■□□□ 1.13
ELL3-203ENST00000467869 ANKRD26Q9UPS8 1709 aa22.1■■□□□ 1.13
ELL3-203ENST00000467869 NLRP13Q86W25 1043 aa22.1■■□□□ 1.13
ELL3-203ENST00000467869 MRS2Q9HD23 443 aa22.1■■□□□ 1.13
ELL3-203ENST00000467869 KIF1AQ12756 1690 aa22.09■■□□□ 1.13
ELL3-203ENST00000467869 FYB1O15117 783 aa22.08■■□□□ 1.13
ELL3-203ENST00000467869 GGNBP2Q9H3C7 697 aa22.08■■□□□ 1.13
ELL3-203ENST00000467869 BRD4O60885 1362 aaPredicted RBP22.07■■□□□ 1.12
ELL3-203ENST00000467869 TTC21BQ7Z4L5 1316 aa22.07■■□□□ 1.12
ELL3-203ENST00000467869 PPP2R1AP30153 589 aa22.06■■□□□ 1.12
ELL3-203ENST00000467869 ORAI2Q96SN7 254 aa22.06■■□□□ 1.12
ELL3-203ENST00000467869 LTBP4Q8N2S1 1624 aa22.05■■□□□ 1.12
ELL3-203ENST00000467869 ZBED9Q6R2W3 1325 aa22.05■■□□□ 1.12
ELL3-203ENST00000467869 TTC21AQ8NDW8 1320 aa22.05■■□□□ 1.12
ELL3-203ENST00000467869 NME9Q86XW9 330 aa22.04■■□□□ 1.12
ELL3-203ENST00000467869 SSH2Q76I76 1423 aa22.04■■□□□ 1.12
ELL3-203ENST00000467869 CCDC184Q52MB2 194 aa22.04■■□□□ 1.12
ELL3-203ENST00000467869 TNNT2P45379 298 aaPredicted RBP22.03■■□□□ 1.12
ELL3-203ENST00000467869 PSME1Q06323 249 aa22.02■■□□□ 1.12
ELL3-203ENST00000467869 COG3Q96JB2 828 aa22.02■■□□□ 1.11
ELL3-203ENST00000467869 FOXO3O43524 673 aa21.99■■□□□ 1.11
ELL3-203ENST00000467869 PAK3O75914 559 aaPredicted RBP21.99■■□□□ 1.11
ELL3-203ENST00000467869 SLAIN2Q9P270 581 aa21.98■■□□□ 1.11
ELL3-203ENST00000467869 ZRANB1Q9UGI0 708 aa21.97■■□□□ 1.11
ELL3-203ENST00000467869 PIK3C2AO00443 1686 aa21.96■■□□□ 1.11
ELL3-203ENST00000467869 OVOS2A0A0J9YW53 1432 aa21.96■■□□□ 1.11
ELL3-203ENST00000467869 OVOS2Q6IE36 1432 aa21.96■■□□□ 1.11
ELL3-203ENST00000467869 NPHP3Q7Z494 1330 aa21.95■■□□□ 1.1
ELL3-203ENST00000467869 KRT28Q7Z3Y7 464 aa21.94■■□□□ 1.1
ELL3-203ENST00000467869 FAM9BQ8IZU0 186 aa21.94■■□□□ 1.1
ELL3-203ENST00000467869 USP31Q70CQ4 1352 aa21.94■■□□□ 1.1
ELL3-203ENST00000467869 IRX6P78412 446 aaPredicted RBP21.94■■□□□ 1.1
ELL3-203ENST00000467869 XPCQ01831 940 aaPredicted RBP21.94■■□□□ 1.1
ELL3-203ENST00000467869 BRINP3Q76B58 766 aa21.93■■□□□ 1.1
ELL3-203ENST00000467869 ABTB2Q8N961 1025 aa21.93■■□□□ 1.1
ELL3-203ENST00000467869 TRPM3Q9HCF6 1732 aaPredicted RBP21.92■■□□□ 1.1
ELL3-203ENST00000467869 SMG6Q86US8 1419 aaKnown RBP21.92■■□□□ 1.1
ELL3-203ENST00000467869 NLRP6P59044 892 aa21.92■■□□□ 1.1
ELL3-203ENST00000467869 CFAP53Q96M91 514 aa21.92■■□□□ 1.1
ELL3-203ENST00000467869 USP54Q70EL1 1684 aa21.91■■□□□ 1.1
ELL3-203ENST00000467869 MTHFSP49914 203 aa21.91■■□□□ 1.1
ELL3-203ENST00000467869 PNISRQ8TF01 805 aaKnown RBP21.9■■□□□ 1.1
ELL3-203ENST00000467869 AATKQ6ZMQ8 1374 aa21.9■■□□□ 1.1
ELL3-203ENST00000467869 RNF123Q5XPI4 1314 aa21.9■■□□□ 1.1
ELL3-203ENST00000467869 NUTM2GQ5VZR2 741 aa21.89■■□□□ 1.09
ELL3-203ENST00000467869 IPO9Q96P70 1041 aaKnown RBP21.89■■□□□ 1.09
ELL3-203ENST00000467869 ANP32AP39687 249 aaKnown RBP21.88■■□□□ 1.09
ELL3-203ENST00000467869 DDX17Q92841 729 aaKnown RBP21.88■■□□□ 1.09
ELL3-203ENST00000467869 SBNO1A3KN83 1393 aa21.87■■□□□ 1.09
ELL3-203ENST00000467869 WDR43Q15061 677 aaKnown RBP eCLIP21.87■■□□□ 1.09
ELL3-203ENST00000467869 LMOD2Q6P5Q4 547 aa21.87■■□□□ 1.09
ELL3-203ENST00000467869 PXDNQ92626 1479 aa21.87■■□□□ 1.09
ELL3-203ENST00000467869 RTL5Q5HYW3 569 aaPredicted RBP21.86■■□□□ 1.09
ELL3-203ENST00000467869 MAP2P11137 1827 aaKnown RBP21.85■■□□□ 1.09
ELL3-203ENST00000467869 MARF1Q9Y4F3 1742 aaKnown RBP21.85■■□□□ 1.09
ELL3-203ENST00000467869 B4GALNT3Q6L9W6 998 aa21.85■■□□□ 1.09
ELL3-203ENST00000467869 POLKQ9UBT6 870 aa21.85■■□□□ 1.09
ELL3-203ENST00000467869 SOX12O15370 315 aa21.84■■□□□ 1.09
ELL3-203ENST00000467869 TNS3Q68CZ2 1445 aa21.84■■□□□ 1.09
ELL3-203ENST00000467869 ALS2Q96Q42 1657 aa21.84■■□□□ 1.09
ELL3-203ENST00000467869 PPM1GO15355 546 aaPredicted RBP21.84■■□□□ 1.09
ELL3-203ENST00000467869 FBLN1P23142 703 aa21.84■■□□□ 1.09
ELL3-203ENST00000467869 RRS1Q15050 365 aaKnown RBP21.83■■□□□ 1.09
ELL3-203ENST00000467869 NHSL1Q5SYE7 1610 aa21.83■■□□□ 1.08
ELL3-203ENST00000467869 CDK12Q9NYV4 1490 aaPredicted RBP21.83■■□□□ 1.08
ELL3-203ENST00000467869 EMILIN1Q9Y6C2 1016 aa21.82■■□□□ 1.08
ELL3-203ENST00000467869 ROBO1Q9Y6N7 1651 aa21.82■■□□□ 1.08
ELL3-203ENST00000467869 IQSEC2Q5JU85 1478 aa21.81■■□□□ 1.08
ELL3-203ENST00000467869 TOM1O60784 492 aa21.81■■□□□ 1.08
ELL3-203ENST00000467869 ARHGEF10O15013 1369 aa21.81■■□□□ 1.08
ELL3-203ENST00000467869 KCNH5Q8NCM2 988 aa21.8■■□□□ 1.08
ELL3-203ENST00000467869 COL3A1P02461 1466 aaPredicted RBP21.79■■□□□ 1.08
ELL3-203ENST00000467869 SOS2Q07890 1332 aaPredicted RBP21.79■■□□□ 1.08
ELL3-203ENST00000467869 SPATA31A3Q5VYP0 1347 aa21.79■■□□□ 1.08
ELL3-203ENST00000467869 USP35Q9P2H5 1018 aa21.79■■□□□ 1.08
ELL3-203ENST00000467869 SHPRHQ149N8 1683 aa21.79■■□□□ 1.08
ELL3-203ENST00000467869 PNPLA6Q8IY17 1366 aa21.79■■□□□ 1.08
ELL3-203ENST00000467869 SLIT3O75094 1523 aa21.78■■□□□ 1.08
ELL3-203ENST00000467869 INSRP06213 1382 aa21.78■■□□□ 1.08
ELL3-203ENST00000467869 USP19O94966 1318 aa21.78■■□□□ 1.08
ELL3-203ENST00000467869 NUDCQ9Y266 331 aa21.78■■□□□ 1.08
ELL3-203ENST00000467869 MAP3K19Q56UN5 1328 aa21.77■■□□□ 1.07
ELL3-203ENST00000467869 DIAPH1O60610 1272 aaKnown RBP21.76■■□□□ 1.07
ELL3-203ENST00000467869 PLEKHG5O94827 1062 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms