RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 PCDHGC3Q9UN70 934 aa8.41□□□□□ -1.06
SSR3-204ENST00000467733 BAZ1AQ9NRL2 1556 aaPredicted RBP8.4□□□□□ -1.06
SSR3-204ENST00000467733 PLEKHG3A1L390 1219 aa8.4□□□□□ -1.06
SSR3-204ENST00000467733 BMP1P13497 986 aa8.4□□□□□ -1.06
SSR3-204ENST00000467733 TRIM46Q7Z4K8 759 aa8.4□□□□□ -1.06
SSR3-204ENST00000467733 PEG3Q9GZU2 1588 aa8.39□□□□□ -1.07
SSR3-204ENST00000467733 SPDYE5A6NIY4 337 aa8.39□□□□□ -1.07
SSR3-204ENST00000467733 DESI1Q6ICB0 168 aa8.39□□□□□ -1.07
SSR3-204ENST00000467733 EVA1BQ9NVM1 165 aa8.39□□□□□ -1.07
SSR3-204ENST00000467733 MPNDQ8N594 471 aa8.38□□□□□ -1.07
SSR3-204ENST00000467733 SPIRE2Q8WWL2 714 aa8.38□□□□□ -1.07
SSR3-204ENST00000467733 PDS5BQ9NTI5 1447 aa8.37□□□□□ -1.07
SSR3-204ENST00000467733 VARSP26640 1264 aaKnown RBP8.37□□□□□ -1.07
SSR3-204ENST00000467733 SSTR3P32745 418 aaPredicted RBP8.37□□□□□ -1.07
SSR3-204ENST00000467733 KCNH2Q12809 1159 aa8.37□□□□□ -1.07
SSR3-204ENST00000467733 MTMR2Q13614 643 aa8.37□□□□□ -1.07
SSR3-204ENST00000467733 VSIG10Q8N0Z9 540 aa8.37□□□□□ -1.07
SSR3-204ENST00000467733 TLL2Q9Y6L7 1015 aa8.37□□□□□ -1.07
SSR3-204ENST00000467733 WDR62O43379 1518 aa8.37□□□□□ -1.07
SSR3-204ENST00000467733 ZNF511Q8NB15 262 aa8.36□□□□□ -1.07
SSR3-204ENST00000467733 PRR7Q8TB68 274 aa8.36□□□□□ -1.07
SSR3-204ENST00000467733 MRC2Q9UBG0 1479 aa8.35□□□□□ -1.07
SSR3-204ENST00000467733 H3BM21 787 aa8.35□□□□□ -1.07
SSR3-204ENST00000467733 NNTQ13423 1086 aa8.35□□□□□ -1.07
SSR3-204ENST00000467733 TTLL12Q14166 644 aaPredicted RBP8.35□□□□□ -1.07
SSR3-204ENST00000467733 LINC01559Q495D7 138 aa8.35□□□□□ -1.07
SSR3-204ENST00000467733 BAP1Q92560 729 aa8.35□□□□□ -1.07
SSR3-204ENST00000467733 MOXD2PA6NHM9 499 aa8.34□□□□□ -1.07
SSR3-204ENST00000467733 GMPRP36959 345 aa8.34□□□□□ -1.07
SSR3-204ENST00000467733 DIXDC1Q155Q3 683 aa8.34□□□□□ -1.07
SSR3-204ENST00000467733 ZSCAN1Q8NBB4 408 aa8.34□□□□□ -1.07
SSR3-204ENST00000467733 ZFP42Q96MM3 310 aa8.34□□□□□ -1.07
SSR3-204ENST00000467733 ADH1CP00326 375 aa8.33□□□□□ -1.08
SSR3-204ENST00000467733 NDUFV2P19404 249 aa8.33□□□□□ -1.08
SSR3-204ENST00000467733 GJA5P36382 358 aa8.33□□□□□ -1.08
SSR3-204ENST00000467733 SCARF1Q14162 830 aa8.33□□□□□ -1.08
SSR3-204ENST00000467733 AMHR2Q16671 573 aa8.33□□□□□ -1.08
SSR3-204ENST00000467733 SLC24A1O60721 1099 aa8.32□□□□□ -1.08
SSR3-204ENST00000467733 MRPL14Q6P1L8 145 aaKnown RBP8.32□□□□□ -1.08
SSR3-204ENST00000467733 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.31□□□□□ -1.08
SSR3-204ENST00000467733 FAM174AQ8TBP5 190 aa8.31□□□□□ -1.08
SSR3-204ENST00000467733 VEGFBP49765 207 aa8.3□□□□□ -1.08
SSR3-204ENST00000467733 GIGYF2Q6Y7W6 1299 aaKnown RBP8.3□□□□□ -1.08
SSR3-204ENST00000467733 TIMP2P16035 220 aa8.29□□□□□ -1.08
SSR3-204ENST00000467733 CTHP32929 405 aa8.29□□□□□ -1.08
SSR3-204ENST00000467733 WDR4P57081 412 aaKnown RBP8.29□□□□□ -1.08
SSR3-204ENST00000467733 LYPD8Q6UX82 237 aa8.29□□□□□ -1.08
SSR3-204ENST00000467733 BARGINQ6ZT62 677 aa8.29□□□□□ -1.08
SSR3-204ENST00000467733 RIMBP3CA6NJZ7 1639 aa8.29□□□□□ -1.08
SSR3-204ENST00000467733 RIMBP3BA6NNM3 1639 aa8.29□□□□□ -1.08
SSR3-204ENST00000467733 RIMBP3Q9UFD9 1639 aa8.29□□□□□ -1.08
SSR3-204ENST00000467733 PURBQ96QR8 312 aaKnown RBP8.28□□□□□ -1.08
SSR3-204ENST00000467733 BEGAINQ9BUH8 593 aa8.28□□□□□ -1.08
SSR3-204ENST00000467733 ERBB4Q15303 1308 aa8.28□□□□□ -1.08
SSR3-204ENST00000467733 LORP23490 312 aaPredicted RBP8.27□□□□□ -1.09
SSR3-204ENST00000467733 RSBN1LQ6PCB5 846 aaPredicted RBP8.27□□□□□ -1.09
SSR3-204ENST00000467733 CDK15Q96Q40 435 aa8.27□□□□□ -1.09
SSR3-204ENST00000467733 CADPSQ9ULU8 1353 aa8.26□□□□□ -1.09
SSR3-204ENST00000467733 ZMYND10O75800 440 aa8.26□□□□□ -1.09
SSR3-204ENST00000467733 VSIG8P0DPA2 414 aa8.26□□□□□ -1.09
SSR3-204ENST00000467733 TBC1D2Q9BYX2 928 aa8.26□□□□□ -1.09
SSR3-204ENST00000467733 ZBTB3Q9H5J0 574 aa8.26□□□□□ -1.09
SSR3-204ENST00000467733 CEP164Q9UPV0 1460 aa8.26□□□□□ -1.09
SSR3-204ENST00000467733 NR5A1Q13285 461 aa8.25□□□□□ -1.09
SSR3-204ENST00000467733 KLF16Q9BXK1 252 aaPredicted RBP8.25□□□□□ -1.09
SSR3-204ENST00000467733 MROH2BQ7Z745 1585 aa8.24□□□□□ -1.09
SSR3-204ENST00000467733 F12P00748 615 aaPredicted RBP8.24□□□□□ -1.09
SSR3-204ENST00000467733 PRPF38BQ5VTL8 546 aaKnown RBP8.24□□□□□ -1.09
SSR3-204ENST00000467733 CFAP99D6REC4 459 aa8.23□□□□□ -1.09
SSR3-204ENST00000467733 SPTLC1O15269 473 aa8.23□□□□□ -1.09
SSR3-204ENST00000467733 ZIC2O95409 532 aaPredicted RBP8.23□□□□□ -1.09
SSR3-204ENST00000467733 ARID5BQ14865 1188 aa8.23□□□□□ -1.09
SSR3-204ENST00000467733 BPHLQ86WA6 291 aaPredicted RBP8.23□□□□□ -1.09
SSR3-204ENST00000467733 MAP10Q9P2G4 905 aa8.23□□□□□ -1.09
SSR3-204ENST00000467733 MAN1A2O60476 641 aa8.22□□□□□ -1.09
SSR3-204ENST00000467733 UPP2O95045 317 aa8.22□□□□□ -1.09
SSR3-204ENST00000467733 AGERQ15109 404 aa8.22□□□□□ -1.09
SSR3-204ENST00000467733 FOXJ1Q92949 421 aa8.22□□□□□ -1.09
SSR3-204ENST00000467733 ARHGEF11O15085 1522 aa8.21□□□□□ -1.1
SSR3-204ENST00000467733 HRCP23327 699 aa8.21□□□□□ -1.1
SSR3-204ENST00000467733 PARP9Q8IXQ6 854 aa8.21□□□□□ -1.1
SSR3-204ENST00000467733 FANCD2Q9BXW9 1451 aa8.2□□□□□ -1.1
SSR3-204ENST00000467733 ARMC2Q8NEN0 867 aa8.2□□□□□ -1.1
SSR3-204ENST00000467733 ZC3H15Q8WU90 426 aaKnown RBP8.2□□□□□ -1.1
SSR3-204ENST00000467733 ITPKCQ96DU7 683 aa8.2□□□□□ -1.1
SSR3-204ENST00000467733 PCDHB15Q9Y5E8 787 aa8.2□□□□□ -1.1
SSR3-204ENST00000467733 SOBPA7XYQ1 873 aa8.19□□□□□ -1.1
SSR3-204ENST00000467733 RIC3Q7Z5B4 369 aa8.19□□□□□ -1.1
SSR3-204ENST00000467733 LINC00528Q8N1L1 170 aa8.19□□□□□ -1.1
SSR3-204ENST00000467733 MEIOBQ8N635 442 aa8.19□□□□□ -1.1
SSR3-204ENST00000467733 ZFAND3Q9H8U3 227 aa8.19□□□□□ -1.1
SSR3-204ENST00000467733 NR3C2P08235 984 aa8.18□□□□□ -1.1
SSR3-204ENST00000467733 C6orf118Q5T5N4 469 aa8.18□□□□□ -1.1
SSR3-204ENST00000467733 NBPF14Q5TI25 921 aa8.18□□□□□ -1.1
SSR3-204ENST00000467733 BMP2P12643 396 aa8.17□□□□□ -1.1
SSR3-204ENST00000467733 C4orf48Q5BLP8 95 aa8.17□□□□□ -1.1
SSR3-204ENST00000467733 MAP4K5Q9Y4K4 846 aa8.17□□□□□ -1.1
SSR3-204ENST00000467733 PRDM2Q13029 1718 aa8.17□□□□□ -1.1
SSR3-204ENST00000467733 GRM5P41594 1212 aa8.16□□□□□ -1.1
SSR3-204ENST00000467733 URB2Q14146 1524 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms