RNA–Protein interactions for RNA: ENST00000467329.5

PRPF3-202, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 5

Gene PRPF3, Length 2,595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-202ENST00000467329 TTC21BQ7Z4L5 1316 aa12.61□□□□□ -0.39
PRPF3-202ENST00000467329 OVOS2A0A0J9YW53 1432 aa12.61□□□□□ -0.39
PRPF3-202ENST00000467329 OVOS2Q6IE36 1432 aa12.61□□□□□ -0.39
PRPF3-202ENST00000467329 STRCP1A6NGW2 1772 aa12.61□□□□□ -0.39
PRPF3-202ENST00000467329 KIF1AQ12756 1690 aa12.6□□□□□ -0.39
PRPF3-202ENST00000467329 USP31Q70CQ4 1352 aa12.6□□□□□ -0.39
PRPF3-202ENST00000467329 PNPLA6Q8IY17 1366 aa12.6□□□□□ -0.39
PRPF3-202ENST00000467329 MTHFSP49914 203 aa12.6□□□□□ -0.39
PRPF3-202ENST00000467329 NGEFQ8N5V2 710 aa12.6□□□□□ -0.39
PRPF3-202ENST00000467329 PROSER2Q86WR7 435 aaPredicted RBP12.59□□□□□ -0.39
PRPF3-202ENST00000467329 ADAMTS8Q9UP79 889 aa12.59□□□□□ -0.39
PRPF3-202ENST00000467329 CDK12Q9NYV4 1490 aaPredicted RBP12.59□□□□□ -0.39
PRPF3-202ENST00000467329 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.59□□□□□ -0.39
PRPF3-202ENST00000467329 HSPA2P54652 639 aa12.58□□□□□ -0.4
PRPF3-202ENST00000467329 COG3Q96JB2 828 aa12.58□□□□□ -0.4
PRPF3-202ENST00000467329 PDE3BQ13370 1112 aa12.58□□□□□ -0.4
PRPF3-202ENST00000467329 NME9Q86XW9 330 aa12.58□□□□□ -0.4
PRPF3-202ENST00000467329 NGDNQ8NEJ9 315 aaKnown RBP12.57□□□□□ -0.4
PRPF3-202ENST00000467329 TNNT2P45379 298 aaPredicted RBP12.57□□□□□ -0.4
PRPF3-202ENST00000467329 PIK3C2AO00443 1686 aa12.57□□□□□ -0.4
PRPF3-202ENST00000467329 NCBP3Q53F19 620 aaKnown RBP12.56□□□□□ -0.4
PRPF3-202ENST00000467329 C19orf44Q9H6X5 657 aa12.56□□□□□ -0.4
PRPF3-202ENST00000467329 PHF8Q9UPP1 1060 aa12.56□□□□□ -0.4
PRPF3-202ENST00000467329 TMEM94Q12767 1356 aa12.55□□□□□ -0.4
PRPF3-202ENST00000467329 NUTM2FA1L443 756 aa12.55□□□□□ -0.4
PRPF3-202ENST00000467329 C14orf37Q86TY3 774 aa12.55□□□□□ -0.4
PRPF3-202ENST00000467329 NUDCQ9Y266 331 aa12.55□□□□□ -0.4
PRPF3-202ENST00000467329 MAP2P11137 1827 aaKnown RBP12.54□□□□□ -0.4
PRPF3-202ENST00000467329 POLKQ9UBT6 870 aa12.54□□□□□ -0.4
PRPF3-202ENST00000467329 IQSEC2Q5JU85 1478 aa12.54□□□□□ -0.4
PRPF3-202ENST00000467329 C1orf167Q5SNV9 1468 aa12.54□□□□□ -0.4
PRPF3-202ENST00000467329 PMFBP1Q8TBY8 1022 aa12.54□□□□□ -0.4
PRPF3-202ENST00000467329 MARF1Q9Y4F3 1742 aaKnown RBP12.53□□□□□ -0.4
PRPF3-202ENST00000467329 XIRP1Q702N8 1843 aaKnown RBP12.53□□□□□ -0.4
PRPF3-202ENST00000467329 MST1RQ04912 1400 aa12.53□□□□□ -0.4
PRPF3-202ENST00000467329 GTF3C3Q9Y5Q9 886 aa12.53□□□□□ -0.4
PRPF3-202ENST00000467329 DMRT2Q9Y5R5 561 aa12.53□□□□□ -0.4
PRPF3-202ENST00000467329 KIF24Q5T7B8 1368 aa12.52□□□□□ -0.41
PRPF3-202ENST00000467329 TRPM3Q9HCF6 1732 aaPredicted RBP12.51□□□□□ -0.41
PRPF3-202ENST00000467329 DIAPH1O60610 1272 aaKnown RBP12.51□□□□□ -0.41
PRPF3-202ENST00000467329 RUNDC1Q96C34 613 aa12.51□□□□□ -0.41
PRPF3-202ENST00000467329 ZRANB1Q9UGI0 708 aa12.51□□□□□ -0.41
PRPF3-202ENST00000467329 MSH6P52701 1360 aa12.51□□□□□ -0.41
PRPF3-202ENST00000467329 PNNQ9H307 717 aaKnown RBP12.51□□□□□ -0.41
PRPF3-202ENST00000467329 ZNF521Q96K83 1311 aa12.51□□□□□ -0.41
PRPF3-202ENST00000467329 ATF3P18847 181 aa12.5□□□□□ -0.41
PRPF3-202ENST00000467329 CADPS2Q86UW7 1296 aa12.5□□□□□ -0.41
PRPF3-202ENST00000467329 ESCO1Q5FWF5 840 aa12.49□□□□□ -0.41
PRPF3-202ENST00000467329 RBM33Q96EV2 1170 aaKnown RBP12.49□□□□□ -0.41
PRPF3-202ENST00000467329 PEAK1Q9H792 1746 aa12.48□□□□□ -0.41
PRPF3-202ENST00000467329 U2AF1L5P0DN76 240 aaPredicted RBP12.48□□□□□ -0.41
PRPF3-202ENST00000467329 U2AF1Q01081 240 aaKnown RBP eCLIP12.48□□□□□ -0.41
PRPF3-202ENST00000467329 SBNO1A3KN83 1393 aa12.47□□□□□ -0.41
PRPF3-202ENST00000467329 PHRF1Q9P1Y6 1649 aaKnown RBP12.47□□□□□ -0.41
PRPF3-202ENST00000467329 SLIT3O75094 1523 aa12.47□□□□□ -0.41
PRPF3-202ENST00000467329 CCDC27Q2M243 656 aa12.47□□□□□ -0.41
PRPF3-202ENST00000467329 EMILIN1Q9Y6C2 1016 aa12.47□□□□□ -0.41
PRPF3-202ENST00000467329 RTL1A6NKG5 1358 aa12.47□□□□□ -0.41
PRPF3-202ENST00000467329 IL13P35225 146 aa12.47□□□□□ -0.41
PRPF3-202ENST00000467329 CCDC146Q8IYE0 955 aa12.47□□□□□ -0.41
PRPF3-202ENST00000467329 APAF1O14727 1248 aa12.46□□□□□ -0.41
PRPF3-202ENST00000467329 FCHSD2O94868 740 aa12.46□□□□□ -0.41
PRPF3-202ENST00000467329 PSME1Q06323 249 aa12.46□□□□□ -0.41
PRPF3-202ENST00000467329 RGPD1P0DJD0 1748 aa12.46□□□□□ -0.41
PRPF3-202ENST00000467329 NFAT5O94916 1531 aa12.46□□□□□ -0.41
PRPF3-202ENST00000467329 ALS2Q96Q42 1657 aa12.46□□□□□ -0.41
PRPF3-202ENST00000467329 PHF23Q9BUL5 403 aaPredicted RBP12.46□□□□□ -0.42
PRPF3-202ENST00000467329 FLT4P35916 1363 aa12.46□□□□□ -0.42
PRPF3-202ENST00000467329 PLEKHF1Q96S99 279 aa12.45□□□□□ -0.42
PRPF3-202ENST00000467329 ORAI2Q96SN7 254 aa12.45□□□□□ -0.42
PRPF3-202ENST00000467329 NLRP6P59044 892 aa12.45□□□□□ -0.42
PRPF3-202ENST00000467329 U2SURPO15042 1029 aaKnown RBP12.44□□□□□ -0.42
PRPF3-202ENST00000467329 NEFLP07196 543 aa12.44□□□□□ -0.42
PRPF3-202ENST00000467329 RRS1Q15050 365 aaKnown RBP12.44□□□□□ -0.42
PRPF3-202ENST00000467329 ABTB2Q8N961 1025 aa12.44□□□□□ -0.42
PRPF3-202ENST00000467329 ZNF335Q9H4Z2 1342 aaPredicted RBP12.44□□□□□ -0.42
PRPF3-202ENST00000467329 GOLGA2Q08379 1002 aa12.44□□□□□ -0.42
PRPF3-202ENST00000467329 USP19O94966 1318 aa12.44□□□□□ -0.42
PRPF3-202ENST00000467329 MAP3K19Q56UN5 1328 aa12.44□□□□□ -0.42
PRPF3-202ENST00000467329 RNF123Q5XPI4 1314 aa12.44□□□□□ -0.42
PRPF3-202ENST00000467329 TCP11L2Q8N4U5 519 aa12.43□□□□□ -0.42
PRPF3-202ENST00000467329 ARHGEF10O15013 1369 aa12.43□□□□□ -0.42
PRPF3-202ENST00000467329 KCNH5Q8NCM2 988 aa12.43□□□□□ -0.42
PRPF3-202ENST00000467329 RSPH6AQ9H0K4 717 aa12.43□□□□□ -0.42
PRPF3-202ENST00000467329 MAPK8IP3Q9UPT6 1336 aa12.43□□□□□ -0.42
PRPF3-202ENST00000467329 PPM1GO15355 546 aaPredicted RBP12.42□□□□□ -0.42
PRPF3-202ENST00000467329 KRT28Q7Z3Y7 464 aa12.42□□□□□ -0.42
PRPF3-202ENST00000467329 WDR63Q8IWG1 891 aa12.42□□□□□ -0.42
PRPF3-202ENST00000467329 TRMT2AQ8IZ69 625 aaKnown RBP12.42□□□□□ -0.42
PRPF3-202ENST00000467329 MED1Q15648 1581 aaPredicted RBP12.42□□□□□ -0.42
PRPF3-202ENST00000467329 NPHP3Q7Z494 1330 aa12.42□□□□□ -0.42
PRPF3-202ENST00000467329 PXDNQ92626 1479 aa12.42□□□□□ -0.42
PRPF3-202ENST00000467329 PAK3O75914 559 aaPredicted RBP12.42□□□□□ -0.42
PRPF3-202ENST00000467329 FBLN1P23142 703 aa12.42□□□□□ -0.42
PRPF3-202ENST00000467329 ERICH6BQ5W0A0 696 aa12.42□□□□□ -0.42
PRPF3-202ENST00000467329 E9PSI1 815 aa12.41□□□□□ -0.42
PRPF3-202ENST00000467329 SLFN5Q08AF3 891 aa12.41□□□□□ -0.42
PRPF3-202ENST00000467329 LTN1O94822 1766 aa12.41□□□□□ -0.42
PRPF3-202ENST00000467329 EIF4A2Q14240 407 aaKnown RBP12.41□□□□□ -0.42
PRPF3-202ENST00000467329 WWC1Q8IX03 1113 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms