RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 ESF1Q9H501 851 aaKnown RBP10.15□□□□□ -0.78
NCL-208ENST00000466274 ABCA9Q8IUA7 1624 aa10.15□□□□□ -0.79
NCL-208ENST00000466274 LTBP4Q8N2S1 1624 aa10.15□□□□□ -0.79
NCL-208ENST00000466274 FRMPD1Q5SYB0 1578 aa10.14□□□□□ -0.79
NCL-208ENST00000466274 EFCAB5A4FU69 1503 aa10.14□□□□□ -0.79
NCL-208ENST00000466274 NRG2O14511 850 aaPredicted RBP10.14□□□□□ -0.79
NCL-208ENST00000466274 TOM1O60784 492 aa10.14□□□□□ -0.79
NCL-208ENST00000466274 S1PR4O95977 384 aa10.14□□□□□ -0.79
NCL-208ENST00000466274 HSPA1LP34931 641 aa10.14□□□□□ -0.79
NCL-208ENST00000466274 PUS10Q3MIT2 529 aaKnown RBP10.14□□□□□ -0.79
NCL-208ENST00000466274 EMID1Q96A84 441 aaPredicted RBP10.14□□□□□ -0.79
NCL-208ENST00000466274 ZFYVE16Q7Z3T8 1539 aa10.13□□□□□ -0.79
NCL-208ENST00000466274 NR1I2O75469 434 aa10.13□□□□□ -0.79
NCL-208ENST00000466274 TRAF7Q6Q0C0 670 aa10.13□□□□□ -0.79
NCL-208ENST00000466274 PDZRN3Q9UPQ7 1066 aa10.13□□□□□ -0.79
NCL-208ENST00000466274 PREX1Q8TCU6 1659 aa10.12□□□□□ -0.79
NCL-208ENST00000466274 PLEKHD1A6NEE1 506 aa10.12□□□□□ -0.79
NCL-208ENST00000466274 SLC19A1P41440 591 aa10.12□□□□□ -0.79
NCL-208ENST00000466274 RSPH4AQ5TD94 716 aa10.12□□□□□ -0.79
NCL-208ENST00000466274 SCUBE3Q8IX30 993 aa10.12□□□□□ -0.79
NCL-208ENST00000466274 PHOX2BQ99453 314 aa10.12□□□□□ -0.79
NCL-208ENST00000466274 MED1Q15648 1581 aaPredicted RBP10.11□□□□□ -0.79
NCL-208ENST00000466274 DAXXQ9UER7 740 aaPredicted RBP10.11□□□□□ -0.79
NCL-208ENST00000466274 DDX11L8A8MPP1 907 aa10.1□□□□□ -0.79
NCL-208ENST00000466274 ADH1BP00325 375 aa10.1□□□□□ -0.79
NCL-208ENST00000466274 PIP4K2BP78356 416 aa10.1□□□□□ -0.79
NCL-208ENST00000466274 GPIHBP1Q8IV16 184 aa10.1□□□□□ -0.79
NCL-208ENST00000466274 RDH13Q8NBN7 331 aa10.1□□□□□ -0.79
NCL-208ENST00000466274 ARHGEF12Q9NZN5 1544 aa10.1□□□□□ -0.79
NCL-208ENST00000466274 STRCQ7RTU9 1775 aa10.1□□□□□ -0.79
NCL-208ENST00000466274 ATP10AO60312 1499 aa10.1□□□□□ -0.79
NCL-208ENST00000466274 ZNF335Q9H4Z2 1342 aaPredicted RBP10.09□□□□□ -0.79
NCL-208ENST00000466274 NCOA1Q15788 1441 aa10.09□□□□□ -0.79
NCL-208ENST00000466274 C9orf84Q5VXU9 1444 aa10.09□□□□□ -0.79
NCL-208ENST00000466274 TRAPPC8Q9Y2L5 1435 aa10.09□□□□□ -0.79
NCL-208ENST00000466274 ANKLE1Q8NAG6 615 aa10.09□□□□□ -0.79
NCL-208ENST00000466274 ZMYM4Q5VZL5 1548 aa10.08□□□□□ -0.8
NCL-208ENST00000466274 LIAT1Q6ZQX7 453 aa10.07□□□□□ -0.8
NCL-208ENST00000466274 SLC6A16Q9GZN6 736 aa10.07□□□□□ -0.8
NCL-208ENST00000466274 FER1L4A9Z1Z3 1794 aa10.06□□□□□ -0.8
NCL-208ENST00000466274 SPRYD7Q5W111 196 aa10.06□□□□□ -0.8
NCL-208ENST00000466274 TRIM67Q6ZTA4 783 aa10.06□□□□□ -0.8
NCL-208ENST00000466274 FUT2Q10981 343 aa10.05□□□□□ -0.8
NCL-208ENST00000466274 SPSB2Q99619 263 aa10.05□□□□□ -0.8
NCL-208ENST00000466274 SCAPERQ9BY12 1400 aa10.05□□□□□ -0.8
NCL-208ENST00000466274 CFAP74Q9C0B2 1584 aa10.05□□□□□ -0.8
NCL-208ENST00000466274 PLA2G2CQ5R387 149 aa10.04□□□□□ -0.8
NCL-208ENST00000466274 MORN1Q5T089 497 aa10.04□□□□□ -0.8
NCL-208ENST00000466274 GCGRP47871 477 aa10.03□□□□□ -0.8
NCL-208ENST00000466274 ZNF598Q86UK7 904 aaKnown RBP10.03□□□□□ -0.8
NCL-208ENST00000466274 RICTORQ6R327 1708 aa10.02□□□□□ -0.8
NCL-208ENST00000466274 ATP6V1AP38606 617 aa10.02□□□□□ -0.81
NCL-208ENST00000466274 VSIG10Q8N0Z9 540 aa10.02□□□□□ -0.81
NCL-208ENST00000466274 HECW1Q76N89 1606 aa10.01□□□□□ -0.81
NCL-208ENST00000466274 EFCAB2Q5VUJ9 269 aa10.01□□□□□ -0.81
NCL-208ENST00000466274 SULF1Q8IWU6 871 aa10.01□□□□□ -0.81
NCL-208ENST00000466274 SLC27A5Q9Y2P5 690 aa10.01□□□□□ -0.81
NCL-208ENST00000466274 SETD1BQ9UPS6 1966 aaKnown RBP10.01□□□□□ -0.81
NCL-208ENST00000466274 CNTLNQ9NXG0 1405 aa10□□□□□ -0.81
NCL-208ENST00000466274 ZNF697Q5TEC3 545 aa10□□□□□ -0.81
NCL-208ENST00000466274 THAP11Q96EK4 314 aa10□□□□□ -0.81
NCL-208ENST00000466274 NPATQ14207 1427 aa9.99□□□□□ -0.81
NCL-208ENST00000466274 PTPRKQ15262 1439 aa9.99□□□□□ -0.81
NCL-208ENST00000466274 CAMSAP1Q5T5Y3 1602 aa9.98□□□□□ -0.81
NCL-208ENST00000466274 FAM160A2Q8N612 972 aaPredicted RBP9.98□□□□□ -0.81
NCL-208ENST00000466274 TNFRSF10AO00220 468 aa9.97□□□□□ -0.81
NCL-208ENST00000466274 MAP2K5Q13163 448 aa9.97□□□□□ -0.81
NCL-208ENST00000466274 PLCH2O75038 1416 aa9.97□□□□□ -0.81
NCL-208ENST00000466274 SIGLEC1Q9BZZ2 1709 aa9.96□□□□□ -0.81
NCL-208ENST00000466274 IRF6O14896 467 aa9.96□□□□□ -0.82
NCL-208ENST00000466274 GDF9O60383 454 aa9.96□□□□□ -0.82
NCL-208ENST00000466274 FMNL1O95466 1100 aaPredicted RBP9.96□□□□□ -0.82
NCL-208ENST00000466274 PLA2R1Q13018 1463 aa9.96□□□□□ -0.82
NCL-208ENST00000466274 TULP1O00294 542 aaPredicted RBP9.95□□□□□ -0.82
NCL-208ENST00000466274 PRR20EP86478 221 aa9.95□□□□□ -0.82
NCL-208ENST00000466274 PRR20CP86479 221 aa9.95□□□□□ -0.82
NCL-208ENST00000466274 PRR20DP86480 221 aa9.95□□□□□ -0.82
NCL-208ENST00000466274 PRR20BP86481 221 aa9.95□□□□□ -0.82
NCL-208ENST00000466274 PRR20AP86496 221 aa9.95□□□□□ -0.82
NCL-208ENST00000466274 BRICD5Q6PL45 260 aa9.95□□□□□ -0.82
NCL-208ENST00000466274 AFAP1Q8N556 730 aa9.95□□□□□ -0.82
NCL-208ENST00000466274 RGS17Q9UGC6 210 aaPredicted RBP9.95□□□□□ -0.82
NCL-208ENST00000466274 ZNF518AQ6AHZ1 1483 aa9.95□□□□□ -0.82
NCL-208ENST00000466274 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.95□□□□□ -0.82
NCL-208ENST00000466274 CPS1P31327 1500 aa9.94□□□□□ -0.82
NCL-208ENST00000466274 NUP153P49790 1475 aaKnown RBP9.94□□□□□ -0.82
NCL-208ENST00000466274 PKDCCQ504Y2 493 aa9.94□□□□□ -0.82
NCL-208ENST00000466274 ZNF787Q6DD87 383 aa9.94□□□□□ -0.82
NCL-208ENST00000466274 PRDM9Q9NQV7 894 aa9.94□□□□□ -0.82
NCL-208ENST00000466274 FCF1Q9Y324 198 aaKnown RBP9.94□□□□□ -0.82
NCL-208ENST00000466274 RAPGEF6Q8TEU7 1601 aa9.93□□□□□ -0.82
NCL-208ENST00000466274 ZMYM3Q14202 1370 aa9.93□□□□□ -0.82
NCL-208ENST00000466274 MDM2Q00987 491 aaPredicted RBP9.93□□□□□ -0.82
NCL-208ENST00000466274 RNF19BQ6ZMZ0 732 aa9.93□□□□□ -0.82
NCL-208ENST00000466274 AGLP35573 1532 aa9.92□□□□□ -0.82
NCL-208ENST00000466274 DGAT1O75907 488 aa9.92□□□□□ -0.82
NCL-208ENST00000466274 CD46P15529 392 aa9.92□□□□□ -0.82
NCL-208ENST00000466274 FOXC1Q12948 553 aa9.92□□□□□ -0.82
NCL-208ENST00000466274 SALL2Q9Y467 1007 aaPredicted RBP9.92□□□□□ -0.82
NCL-208ENST00000466274 TCOF1Q13428 1488 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms