RNA–Protein interactions for RNA: ENST00000466199.1

EIF3B-208, Transcript of eukaryotic translation initiation factor 3 subunit B, humanhuman

TSL 2

Gene EIF3B, Length 734 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3B-208ENST00000466199 AMER1Q5JTC6 1135 aaPredicted RBP12.35□□□□□ -0.43
EIF3B-208ENST00000466199 GGNBP2Q9H3C7 697 aa12.35□□□□□ -0.43
EIF3B-208ENST00000466199 EDC4Q6P2E9 1401 aaKnown RBP12.35□□□□□ -0.43
EIF3B-208ENST00000466199 NALCNQ8IZF0 1738 aa12.34□□□□□ -0.43
EIF3B-208ENST00000466199 NSD2O96028 1365 aa12.33□□□□□ -0.44
EIF3B-208ENST00000466199 NPC1L1Q9UHC9 1359 aa12.33□□□□□ -0.44
EIF3B-208ENST00000466199 NME9Q86XW9 330 aa12.33□□□□□ -0.44
EIF3B-208ENST00000466199 DDX17Q92841 729 aaKnown RBP12.33□□□□□ -0.44
EIF3B-208ENST00000466199 PRKRIP1Q9H875 184 aaPredicted RBP12.33□□□□□ -0.44
EIF3B-208ENST00000466199 USP6P35125 1406 aa12.33□□□□□ -0.44
EIF3B-208ENST00000466199 FMN2Q9NZ56 1722 aa12.33□□□□□ -0.44
EIF3B-208ENST00000466199 HAP1P54257 671 aaPredicted RBP12.32□□□□□ -0.44
EIF3B-208ENST00000466199 KCNH5Q8NCM2 988 aa12.32□□□□□ -0.44
EIF3B-208ENST00000466199 TNNT2P45379 298 aaPredicted RBP12.31□□□□□ -0.44
EIF3B-208ENST00000466199 NUTM2GQ5VZR2 741 aa12.31□□□□□ -0.44
EIF3B-208ENST00000466199 SOS2Q07890 1332 aaPredicted RBP12.31□□□□□ -0.44
EIF3B-208ENST00000466199 SBNO1A3KN83 1393 aa12.3□□□□□ -0.44
EIF3B-208ENST00000466199 CD163L1Q9NR16 1453 aa12.3□□□□□ -0.44
EIF3B-208ENST00000466199 PLEKHG5O94827 1062 aa12.3□□□□□ -0.44
EIF3B-208ENST00000466199 SPATA31A3Q5VYP0 1347 aa12.3□□□□□ -0.44
EIF3B-208ENST00000466199 ILDR2Q71H61 639 aa12.29□□□□□ -0.44
EIF3B-208ENST00000466199 MIER1Q8N108 512 aa12.29□□□□□ -0.44
EIF3B-208ENST00000466199 ARHGEF10O15013 1369 aa12.29□□□□□ -0.44
EIF3B-208ENST00000466199 CFAP53Q96M91 514 aa12.28□□□□□ -0.44
EIF3B-208ENST00000466199 ZRANB1Q9UGI0 708 aa12.28□□□□□ -0.44
EIF3B-208ENST00000466199 ITSN1Q15811 1721 aa12.28□□□□□ -0.44
EIF3B-208ENST00000466199 USP32Q8NFA0 1604 aa12.27□□□□□ -0.44
EIF3B-208ENST00000466199 PPM1GO15355 546 aaPredicted RBP12.27□□□□□ -0.45
EIF3B-208ENST00000466199 SOX12O15370 315 aa12.27□□□□□ -0.45
EIF3B-208ENST00000466199 MYBBP1AQ9BQG0 1328 aaKnown RBP12.27□□□□□ -0.45
EIF3B-208ENST00000466199 XIRP1Q702N8 1843 aaKnown RBP12.27□□□□□ -0.45
EIF3B-208ENST00000466199 USP31Q70CQ4 1352 aa12.27□□□□□ -0.45
EIF3B-208ENST00000466199 SSH2Q76I76 1423 aa12.27□□□□□ -0.45
EIF3B-208ENST00000466199 CCER2I3L3R5 266 aa12.26□□□□□ -0.45
EIF3B-208ENST00000466199 GCP02774 474 aa12.26□□□□□ -0.45
EIF3B-208ENST00000466199 PPP2R1AP30153 589 aa12.26□□□□□ -0.45
EIF3B-208ENST00000466199 AMPHP49418 695 aa12.26□□□□□ -0.45
EIF3B-208ENST00000466199 KIF1AQ12756 1690 aa12.26□□□□□ -0.45
EIF3B-208ENST00000466199 RGPD8O14715 1765 aaPredicted RBP12.25□□□□□ -0.45
EIF3B-208ENST00000466199 ZBTB7CA1YPR0 619 aa12.24□□□□□ -0.45
EIF3B-208ENST00000466199 HSPA1LP34931 641 aa12.24□□□□□ -0.45
EIF3B-208ENST00000466199 MTHFSP49914 203 aa12.24□□□□□ -0.45
EIF3B-208ENST00000466199 PARD3Q8TEW0 1356 aa12.24□□□□□ -0.45
EIF3B-208ENST00000466199 MRS2Q9HD23 443 aa12.24□□□□□ -0.45
EIF3B-208ENST00000466199 TNS3Q68CZ2 1445 aa12.23□□□□□ -0.45
EIF3B-208ENST00000466199 NUDCQ9Y266 331 aa12.23□□□□□ -0.45
EIF3B-208ENST00000466199 ZC3H6P61129 1189 aaKnown RBP12.22□□□□□ -0.45
EIF3B-208ENST00000466199 CABLES1Q8TDN4 633 aa12.22□□□□□ -0.45
EIF3B-208ENST00000466199 POLKQ9UBT6 870 aa12.22□□□□□ -0.45
EIF3B-208ENST00000466199 TOPAZ1Q8N9V7 1692 aa12.22□□□□□ -0.45
EIF3B-208ENST00000466199 AATKQ6ZMQ8 1374 aa12.21□□□□□ -0.45
EIF3B-208ENST00000466199 FBLN1P23142 703 aa12.21□□□□□ -0.45
EIF3B-208ENST00000466199 RRS1Q15050 365 aaKnown RBP12.21□□□□□ -0.45
EIF3B-208ENST00000466199 MYOM1P52179 1685 aa12.21□□□□□ -0.45
EIF3B-208ENST00000466199 PXDNQ92626 1479 aa12.21□□□□□ -0.46
EIF3B-208ENST00000466199 NUTM2BA6NNL0 878 aaPredicted RBP12.2□□□□□ -0.46
EIF3B-208ENST00000466199 NUTM2EB1AL46 878 aaPredicted RBP12.2□□□□□ -0.46
EIF3B-208ENST00000466199 SOCS7O14512 581 aa12.2□□□□□ -0.46
EIF3B-208ENST00000466199 NUTM2AQ8IVF1 878 aaPredicted RBP12.2□□□□□ -0.46
EIF3B-208ENST00000466199 USP19O94966 1318 aa12.19□□□□□ -0.46
EIF3B-208ENST00000466199 MED1Q15648 1581 aaPredicted RBP12.19□□□□□ -0.46
EIF3B-208ENST00000466199 DIAPH1O60610 1272 aaKnown RBP12.19□□□□□ -0.46
EIF3B-208ENST00000466199 WDR43Q15061 677 aaKnown RBP eCLIP12.19□□□□□ -0.46
EIF3B-208ENST00000466199 ARHGEF25Q86VW2 580 aa12.19□□□□□ -0.46
EIF3B-208ENST00000466199 IP6K1Q92551 441 aa12.19□□□□□ -0.46
EIF3B-208ENST00000466199 PRDM11Q9NQV5 511 aa12.19□□□□□ -0.46
EIF3B-208ENST00000466199 JCADQ9P266 1359 aa12.18□□□□□ -0.46
EIF3B-208ENST00000466199 AKAP12Q02952 1782 aa12.18□□□□□ -0.46
EIF3B-208ENST00000466199 MAP3K19Q56UN5 1328 aa12.18□□□□□ -0.46
EIF3B-208ENST00000466199 EVA1CP58658 441 aa12.18□□□□□ -0.46
EIF3B-208ENST00000466199 EMILIN1Q9Y6C2 1016 aa12.18□□□□□ -0.46
EIF3B-208ENST00000466199 ROBO1Q9Y6N7 1651 aa12.18□□□□□ -0.46
EIF3B-208ENST00000466199 PNNQ9H307 717 aaKnown RBP12.17□□□□□ -0.46
EIF3B-208ENST00000466199 OVOS2A0A0J9YW53 1432 aa12.17□□□□□ -0.46
EIF3B-208ENST00000466199 OVOS2Q6IE36 1432 aa12.17□□□□□ -0.46
EIF3B-208ENST00000466199 MON2Q7Z3U7 1717 aa12.17□□□□□ -0.46
EIF3B-208ENST00000466199 KIF24Q5T7B8 1368 aa12.17□□□□□ -0.46
EIF3B-208ENST00000466199 SPATA31A6Q5VVP1 1343 aa12.16□□□□□ -0.46
EIF3B-208ENST00000466199 U2SURPO15042 1029 aaKnown RBP12.16□□□□□ -0.46
EIF3B-208ENST00000466199 ADAMTS2O95450 1211 aa12.16□□□□□ -0.46
EIF3B-208ENST00000466199 NEFMP07197 916 aa12.16□□□□□ -0.46
EIF3B-208ENST00000466199 MEX3CQ5U5Q3 659 aaKnown RBP12.16□□□□□ -0.46
EIF3B-208ENST00000466199 PNPLA6Q8IY17 1366 aa12.16□□□□□ -0.46
EIF3B-208ENST00000466199 AHDC1Q5TGY3 1603 aaPredicted RBP12.15□□□□□ -0.46
EIF3B-208ENST00000466199 CSB-PGBD3P0DP91 1061 aa12.15□□□□□ -0.46
EIF3B-208ENST00000466199 HOXC9P31274 260 aa12.15□□□□□ -0.46
EIF3B-208ENST00000466199 HSP90AB2PQ58FF8 381 aa12.15□□□□□ -0.46
EIF3B-208ENST00000466199 FAM9BQ8IZU0 186 aa12.15□□□□□ -0.46
EIF3B-208ENST00000466199 LTV1Q96GA3 475 aaPredicted RBP12.15□□□□□ -0.46
EIF3B-208ENST00000466199 NGLY1Q96IV0 654 aa12.15□□□□□ -0.46
EIF3B-208ENST00000466199 FAM83GA6ND36 823 aa12.14□□□□□ -0.47
EIF3B-208ENST00000466199 U2AF1L5P0DN76 240 aaPredicted RBP12.14□□□□□ -0.47
EIF3B-208ENST00000466199 U2AF1Q01081 240 aaKnown RBP eCLIP12.14□□□□□ -0.47
EIF3B-208ENST00000466199 CHRNA2Q15822 529 aa12.14□□□□□ -0.47
EIF3B-208ENST00000466199 PNISRQ8TF01 805 aaKnown RBP12.14□□□□□ -0.47
EIF3B-208ENST00000466199 FLT4P35916 1363 aa12.14□□□□□ -0.47
EIF3B-208ENST00000466199 CPDO75976 1380 aa12.13□□□□□ -0.47
EIF3B-208ENST00000466199 KIAA0232Q92628 1395 aa12.13□□□□□ -0.47
EIF3B-208ENST00000466199 CCDC184Q52MB2 194 aa12.12□□□□□ -0.47
EIF3B-208ENST00000466199 INSRP06213 1382 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms