RNA–Protein interactions for RNA: ENST00000465818.5

VPS8-218, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 572 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-218ENST00000465818 ZMYM3Q14202 1370 aa11.09□□□□□ -0.63
VPS8-218ENST00000465818 ANKRD30BQ9BXX2 1392 aa11.09□□□□□ -0.63
VPS8-218ENST00000465818 ZNF316A6NFI3 1004 aaPredicted RBP11.09□□□□□ -0.63
VPS8-218ENST00000465818 ZMYND15Q9H091 742 aa11.09□□□□□ -0.63
VPS8-218ENST00000465818 PELP1Q8IZL8 1130 aaKnown RBP11.08□□□□□ -0.64
VPS8-218ENST00000465818 ADGRB3O60242 1522 aa11.08□□□□□ -0.64
VPS8-218ENST00000465818 IFT172Q9UG01 1749 aa11.07□□□□□ -0.64
VPS8-218ENST00000465818 DAXXQ9UER7 740 aaPredicted RBP11.07□□□□□ -0.64
VPS8-218ENST00000465818 COLQQ9Y215 455 aaPredicted RBP11.07□□□□□ -0.64
VPS8-218ENST00000465818 CCDC144AA2RUR9 1427 aa11.07□□□□□ -0.64
VPS8-218ENST00000465818 UBR1Q8IWV7 1749 aa11.06□□□□□ -0.64
VPS8-218ENST00000465818 KDM5AP29375 1690 aaKnown RBP11.06□□□□□ -0.64
VPS8-218ENST00000465818 HIC1Q14526 733 aa11.06□□□□□ -0.64
VPS8-218ENST00000465818 CLSPNQ9HAW4 1339 aa11.06□□□□□ -0.64
VPS8-218ENST00000465818 TMEM131LA2VDJ0 1609 aa11.06□□□□□ -0.64
VPS8-218ENST00000465818 TNRQ92752 1358 aa11.05□□□□□ -0.64
VPS8-218ENST00000465818 FCHSD2O94868 740 aa11.05□□□□□ -0.64
VPS8-218ENST00000465818 PTGDRQ13258 359 aa11.05□□□□□ -0.64
VPS8-218ENST00000465818 REPIN1Q9BWE0 567 aaKnown RBP11.05□□□□□ -0.64
VPS8-218ENST00000465818 CEP170BQ9Y4F5 1589 aaPredicted RBP11.04□□□□□ -0.64
VPS8-218ENST00000465818 PPLO60437 1756 aa11.04□□□□□ -0.64
VPS8-218ENST00000465818 POTEFA5A3E0 1075 aa11.04□□□□□ -0.64
VPS8-218ENST00000465818 HAX1O00165 279 aa11.04□□□□□ -0.64
VPS8-218ENST00000465818 EVI5O60447 810 aa11.04□□□□□ -0.64
VPS8-218ENST00000465818 FBXO31Q5XUX0 539 aaPredicted RBP11.04□□□□□ -0.64
VPS8-218ENST00000465818 SETD1BQ9UPS6 1966 aaKnown RBP11.04□□□□□ -0.64
VPS8-218ENST00000465818 NEURL4Q96JN8 1562 aa11.03□□□□□ -0.64
VPS8-218ENST00000465818 PLCG2P16885 1265 aa11.03□□□□□ -0.64
VPS8-218ENST00000465818 CEBPAP49715 358 aaPredicted RBP11.03□□□□□ -0.64
VPS8-218ENST00000465818 NLRP1Q9C000 1473 aa11.03□□□□□ -0.64
VPS8-218ENST00000465818 KDM4FA0A1W2PPD8 638 aa11.02□□□□□ -0.65
VPS8-218ENST00000465818 C1orf115Q9H7X2 142 aa11.02□□□□□ -0.65
VPS8-218ENST00000465818 SPATA31E1Q6ZUB1 1445 aa11.01□□□□□ -0.65
VPS8-218ENST00000465818 MS4A1P11836 297 aa11.01□□□□□ -0.65
VPS8-218ENST00000465818 CLCN6P51797 869 aa11.01□□□□□ -0.65
VPS8-218ENST00000465818 DDRGK1Q96HY6 314 aa11.01□□□□□ -0.65
VPS8-218ENST00000465818 SIN3AQ96ST3 1273 aa11.01□□□□□ -0.65
VPS8-218ENST00000465818 CDHR5Q9HBB8 845 aa11.01□□□□□ -0.65
VPS8-218ENST00000465818 NPDC1Q9NQX5 325 aaPredicted RBP11.01□□□□□ -0.65
VPS8-218ENST00000465818 L3MBTL3Q96JM7 780 aaPredicted RBP11□□□□□ -0.65
VPS8-218ENST00000465818 A2ML1A8K2U0 1454 aa11□□□□□ -0.65
VPS8-218ENST00000465818 NEXMIFQ5QGS0 1516 aa10.99□□□□□ -0.65
VPS8-218ENST00000465818 G3V3G9 751 aa10.99□□□□□ -0.65
VPS8-218ENST00000465818 ONECUT3O60422 494 aaPredicted RBP10.99□□□□□ -0.65
VPS8-218ENST00000465818 NEUROD1Q13562 356 aa10.99□□□□□ -0.65
VPS8-218ENST00000465818 POLR1AO95602 1720 aaPredicted RBP10.98□□□□□ -0.65
VPS8-218ENST00000465818 PTCD2Q8WV60 388 aaKnown RBP10.98□□□□□ -0.65
VPS8-218ENST00000465818 RSPH6AQ9H0K4 717 aa10.98□□□□□ -0.65
VPS8-218ENST00000465818 ANO8Q9HCE9 1232 aaPredicted RBP10.98□□□□□ -0.65
VPS8-218ENST00000465818 TONSLQ96HA7 1378 aa10.98□□□□□ -0.65
VPS8-218ENST00000465818 UHRF1BP1Q6BDS2 1440 aa10.98□□□□□ -0.65
VPS8-218ENST00000465818 GIGYF2Q6Y7W6 1299 aaKnown RBP10.97□□□□□ -0.65
VPS8-218ENST00000465818 TMUB1Q9BVT8 246 aa10.97□□□□□ -0.65
VPS8-218ENST00000465818 IDI1Q13907 227 aa10.96□□□□□ -0.65
VPS8-218ENST00000465818 PHOX2BQ99453 314 aa10.96□□□□□ -0.65
VPS8-218ENST00000465818 SLC52A1Q9NWF4 448 aa10.96□□□□□ -0.65
VPS8-218ENST00000465818 IQGAP1P46940 1657 aa10.95□□□□□ -0.66
VPS8-218ENST00000465818 MYOM2P54296 1465 aa10.95□□□□□ -0.66
VPS8-218ENST00000465818 TBC1D12O60347 775 aa10.95□□□□□ -0.66
VPS8-218ENST00000465818 TTLL12Q14166 644 aaPredicted RBP10.95□□□□□ -0.66
VPS8-218ENST00000465818 SLIT1O75093 1534 aa10.94□□□□□ -0.66
VPS8-218ENST00000465818 TRPM1Q7Z4N2 1603 aa10.94□□□□□ -0.66
VPS8-218ENST00000465818 LMTK3Q96Q04 1460 aa10.93□□□□□ -0.66
VPS8-218ENST00000465818 ZFYVE9O95405 1425 aa10.93□□□□□ -0.66
VPS8-218ENST00000465818 GABBR2O75899 941 aa10.93□□□□□ -0.66
VPS8-218ENST00000465818 GOPCQ9HD26 462 aa10.93□□□□□ -0.66
VPS8-218ENST00000465818 LAMC1P11047 1609 aa10.93□□□□□ -0.66
VPS8-218ENST00000465818 ARHGAP23Q9P227 1491 aa10.93□□□□□ -0.66
VPS8-218ENST00000465818 SETD1AO15047 1707 aaKnown RBP10.92□□□□□ -0.66
VPS8-218ENST00000465818 NRXN3Q9Y4C0 1643 aa10.92□□□□□ -0.66
VPS8-218ENST00000465818 EN1Q05925 392 aaPredicted RBP10.92□□□□□ -0.66
VPS8-218ENST00000465818 RGL3Q3MIN7 710 aa10.92□□□□□ -0.66
VPS8-218ENST00000465818 KIAA1210Q9ULL0 1709 aa10.92□□□□□ -0.66
VPS8-218ENST00000465818 RIMS2Q9UQ26 1411 aa10.92□□□□□ -0.66
VPS8-218ENST00000465818 ZNF326Q5BKZ1 582 aaKnown RBP10.91□□□□□ -0.66
VPS8-218ENST00000465818 L3MBTL2Q969R5 705 aa10.91□□□□□ -0.66
VPS8-218ENST00000465818 TMEM2Q9UHN6 1383 aa10.9□□□□□ -0.66
VPS8-218ENST00000465818 NRXN1Q9ULB1 1477 aa10.9□□□□□ -0.66
VPS8-218ENST00000465818 SLC34A2O95436 690 aa10.9□□□□□ -0.66
VPS8-218ENST00000465818 TSR1Q2NL82 804 aaKnown RBP10.9□□□□□ -0.66
VPS8-218ENST00000465818 PRAG1Q86YV5 1406 aa10.9□□□□□ -0.66
VPS8-218ENST00000465818 SCAF11Q99590 1463 aaKnown RBP10.89□□□□□ -0.67
VPS8-218ENST00000465818 SEC24BO95487 1268 aa10.89□□□□□ -0.67
VPS8-218ENST00000465818 PCDHGA10Q9Y5H3 936 aa10.89□□□□□ -0.67
VPS8-218ENST00000465818 SETBP1Q9Y6X0 1596 aa10.89□□□□□ -0.67
VPS8-218ENST00000465818 RALGAPBQ86X10 1494 aa10.88□□□□□ -0.67
VPS8-218ENST00000465818 STRCQ7RTU9 1775 aa10.88□□□□□ -0.67
VPS8-218ENST00000465818 PIK3C2GO75747 1445 aa10.88□□□□□ -0.67
VPS8-218ENST00000465818 PHF14O94880 888 aa10.87□□□□□ -0.67
VPS8-218ENST00000465818 DCAF11Q8TEB1 546 aa10.87□□□□□ -0.67
VPS8-218ENST00000465818 ASXL1Q8IXJ9 1541 aa10.87□□□□□ -0.67
VPS8-218ENST00000465818 RPGRIP1LQ68CZ1 1315 aa10.86□□□□□ -0.67
VPS8-218ENST00000465818 DIP2AQ14689 1571 aa10.86□□□□□ -0.67
VPS8-218ENST00000465818 ZEB1P37275 1124 aaPredicted RBP10.86□□□□□ -0.67
VPS8-218ENST00000465818 FAM161AQ3B820 660 aa10.86□□□□□ -0.67
VPS8-218ENST00000465818 NUTM2DQ5VT03 806 aaPredicted RBP10.86□□□□□ -0.67
VPS8-218ENST00000465818 RBM33Q96EV2 1170 aaKnown RBP10.86□□□□□ -0.67
VPS8-218ENST00000465818 ADGRF5Q8IZF2 1346 aa10.85□□□□□ -0.67
VPS8-218ENST00000465818 ALKQ9UM73 1620 aa10.85□□□□□ -0.67
VPS8-218ENST00000465818 MDM2Q00987 491 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms