RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 ZNF692Q9BU19 519 aaPredicted RBP17.3■□□□□ 0.36
CHPF2-202ENST00000465601 ALS2Q96Q42 1657 aa17.29■□□□□ 0.36
CHPF2-202ENST00000465601 CDCA8Q53HL2 280 aa17.29■□□□□ 0.36
CHPF2-202ENST00000465601 AKAP12Q02952 1782 aa17.29■□□□□ 0.36
CHPF2-202ENST00000465601 ABTB2Q8N961 1025 aa17.28■□□□□ 0.36
CHPF2-202ENST00000465601 USP6P35125 1406 aa17.28■□□□□ 0.36
CHPF2-202ENST00000465601 HAP1P54257 671 aaPredicted RBP17.27■□□□□ 0.36
CHPF2-202ENST00000465601 C8orf37Q96NL8 207 aa17.27■□□□□ 0.36
CHPF2-202ENST00000465601 RGS17Q9UGC6 210 aaPredicted RBP17.27■□□□□ 0.36
CHPF2-202ENST00000465601 CPSF1Q10570 1443 aaKnown RBP17.27■□□□□ 0.35
CHPF2-202ENST00000465601 KTN1Q86UP2 1357 aaKnown RBP17.27■□□□□ 0.35
CHPF2-202ENST00000465601 HDGFL2Q7Z4V5 671 aaPredicted RBP17.26■□□□□ 0.35
CHPF2-202ENST00000465601 POLR3GLQ9BT43 218 aa17.26■□□□□ 0.35
CHPF2-202ENST00000465601 CD163L1Q9NR16 1453 aa17.25■□□□□ 0.35
CHPF2-202ENST00000465601 TTC21BQ7Z4L5 1316 aa17.25■□□□□ 0.35
CHPF2-202ENST00000465601 SSH2Q76I76 1423 aa17.25■□□□□ 0.35
CHPF2-202ENST00000465601 NGLY1Q96IV0 654 aa17.25■□□□□ 0.35
CHPF2-202ENST00000465601 TERF2IPQ9NYB0 399 aa17.25■□□□□ 0.35
CHPF2-202ENST00000465601 BRD4O60885 1362 aaPredicted RBP17.25■□□□□ 0.35
CHPF2-202ENST00000465601 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.23■□□□□ 0.35
CHPF2-202ENST00000465601 NINLQ9Y2I6 1382 aa17.23■□□□□ 0.35
CHPF2-202ENST00000465601 AFF2P51816 1311 aa17.22■□□□□ 0.35
CHPF2-202ENST00000465601 MON2Q7Z3U7 1717 aa17.22■□□□□ 0.35
CHPF2-202ENST00000465601 MARF1Q9Y4F3 1742 aaKnown RBP17.22■□□□□ 0.35
CHPF2-202ENST00000465601 C11orf95C9JLR9 678 aaPredicted RBP17.22■□□□□ 0.35
CHPF2-202ENST00000465601 NLRP6P59044 892 aa17.22■□□□□ 0.35
CHPF2-202ENST00000465601 NLRP13Q86W25 1043 aa17.22■□□□□ 0.35
CHPF2-202ENST00000465601 A0A1W2PP64 1363 aa17.22■□□□□ 0.35
CHPF2-202ENST00000465601 ABCA3Q99758 1704 aa17.21■□□□□ 0.35
CHPF2-202ENST00000465601 TTC21AQ8NDW8 1320 aa17.21■□□□□ 0.34
CHPF2-202ENST00000465601 POTEAQ6S8J7 498 aa17.2■□□□□ 0.34
CHPF2-202ENST00000465601 CRYBG1Q9Y4K1 1723 aa17.19■□□□□ 0.34
CHPF2-202ENST00000465601 ZNF772Q68DY9 489 aaPredicted RBP17.19■□□□□ 0.34
CHPF2-202ENST00000465601 ZRANB1Q9UGI0 708 aa17.19■□□□□ 0.34
CHPF2-202ENST00000465601 ANKRD36BQ8N2N9 1353 aa17.18■□□□□ 0.34
CHPF2-202ENST00000465601 PIK3C2AO00443 1686 aa17.18■□□□□ 0.34
CHPF2-202ENST00000465601 FAM83GA6ND36 823 aa17.18■□□□□ 0.34
CHPF2-202ENST00000465601 ZC3H6P61129 1189 aaKnown RBP17.18■□□□□ 0.34
CHPF2-202ENST00000465601 NME9Q86XW9 330 aa17.18■□□□□ 0.34
CHPF2-202ENST00000465601 EDC4Q6P2E9 1401 aaKnown RBP17.18■□□□□ 0.34
CHPF2-202ENST00000465601 NRKQ7Z2Y5 1582 aa17.18■□□□□ 0.34
CHPF2-202ENST00000465601 USP19O94966 1318 aa17.18■□□□□ 0.34
CHPF2-202ENST00000465601 FNBP4Q8N3X1 1017 aaPredicted RBP17.17■□□□□ 0.34
CHPF2-202ENST00000465601 USP21Q9UK80 565 aa17.17■□□□□ 0.34
CHPF2-202ENST00000465601 MYOM1P52179 1685 aa17.16■□□□□ 0.34
CHPF2-202ENST00000465601 GCP02774 474 aa17.16■□□□□ 0.34
CHPF2-202ENST00000465601 ILDR2Q71H61 639 aa17.16■□□□□ 0.34
CHPF2-202ENST00000465601 PHRF1Q9P1Y6 1649 aaKnown RBP17.16■□□□□ 0.34
CHPF2-202ENST00000465601 QTRT2Q9H974 415 aaKnown RBP17.15■□□□□ 0.34
CHPF2-202ENST00000465601 SOX12O15370 315 aa17.14■□□□□ 0.33
CHPF2-202ENST00000465601 CHRNA2Q15822 529 aa17.14■□□□□ 0.33
CHPF2-202ENST00000465601 CARD14Q9BXL6 1004 aa17.14■□□□□ 0.33
CHPF2-202ENST00000465601 PRDM11Q9NQV5 511 aa17.14■□□□□ 0.33
CHPF2-202ENST00000465601 KIF7Q2M1P5 1343 aa17.14■□□□□ 0.33
CHPF2-202ENST00000465601 KIAA0232Q92628 1395 aa17.14■□□□□ 0.33
CHPF2-202ENST00000465601 BCL9LQ86UU0 1499 aa17.12■□□□□ 0.33
CHPF2-202ENST00000465601 SLIT2O94813 1529 aa17.12■□□□□ 0.33
CHPF2-202ENST00000465601 ZBTB7CA1YPR0 619 aa17.12■□□□□ 0.33
CHPF2-202ENST00000465601 ZEB1P37275 1124 aaPredicted RBP17.12■□□□□ 0.33
CHPF2-202ENST00000465601 UNC5CLQ8IV45 518 aa17.12■□□□□ 0.33
CHPF2-202ENST00000465601 PANK3Q9H999 370 aa17.12■□□□□ 0.33
CHPF2-202ENST00000465601 USP31Q70CQ4 1352 aa17.12■□□□□ 0.33
CHPF2-202ENST00000465601 BTG4Q9NY30 223 aa17.11■□□□□ 0.33
CHPF2-202ENST00000465601 SLIT3O75094 1523 aa17.11■□□□□ 0.33
CHPF2-202ENST00000465601 PLCH1Q4KWH8 1693 aa17.1■□□□□ 0.33
CHPF2-202ENST00000465601 COL14A1Q05707 1796 aaKnown RBP17.1■□□□□ 0.33
CHPF2-202ENST00000465601 FYB1O15117 783 aa17.1■□□□□ 0.33
CHPF2-202ENST00000465601 KCNH5Q8NCM2 988 aa17.1■□□□□ 0.33
CHPF2-202ENST00000465601 TRPC5Q9UL62 973 aaPredicted RBP17.1■□□□□ 0.33
CHPF2-202ENST00000465601 RXRBP28702 533 aa17.09■□□□□ 0.33
CHPF2-202ENST00000465601 GGNBP2Q9H3C7 697 aa17.09■□□□□ 0.33
CHPF2-202ENST00000465601 CPDO75976 1380 aa17.09■□□□□ 0.33
CHPF2-202ENST00000465601 NSD3Q9BZ95 1437 aa17.09■□□□□ 0.33
CHPF2-202ENST00000465601 NWD2Q9ULI1 1742 aa17.08■□□□□ 0.32
CHPF2-202ENST00000465601 CCDC7Q96M83 1385 aa17.08■□□□□ 0.32
CHPF2-202ENST00000465601 COG3Q96JB2 828 aa17.08■□□□□ 0.32
CHPF2-202ENST00000465601 ATRNO75882 1429 aa17.07■□□□□ 0.32
CHPF2-202ENST00000465601 WASHC2AQ641Q2 1341 aa17.07■□□□□ 0.32
CHPF2-202ENST00000465601 RBM6P78332 1123 aaKnown RBP17.07■□□□□ 0.32
CHPF2-202ENST00000465601 USP54Q70EL1 1684 aa17.07■□□□□ 0.32
CHPF2-202ENST00000465601 OVOS2A0A0J9YW53 1432 aa17.06■□□□□ 0.32
CHPF2-202ENST00000465601 OVOS2Q6IE36 1432 aa17.06■□□□□ 0.32
CHPF2-202ENST00000465601 ARHGEF25Q86VW2 580 aa17.06■□□□□ 0.32
CHPF2-202ENST00000465601 CCDC9Q9Y3X0 531 aaKnown RBP17.06■□□□□ 0.32
CHPF2-202ENST00000465601 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.06■□□□□ 0.32
CHPF2-202ENST00000465601 KIF20BQ96Q89 1820 aa17.05■□□□□ 0.32
CHPF2-202ENST00000465601 GJD4Q96KN9 370 aaPredicted RBP17.05■□□□□ 0.32
CHPF2-202ENST00000465601 STRN4Q9NRL3 753 aa17.05■□□□□ 0.32
CHPF2-202ENST00000465601 NFAT5O94916 1531 aa17.05■□□□□ 0.32
CHPF2-202ENST00000465601 FBLN1P23142 703 aa17.04■□□□□ 0.32
CHPF2-202ENST00000465601 EVA1CP58658 441 aa17.04■□□□□ 0.32
CHPF2-202ENST00000465601 VPS72Q15906 364 aa17.04■□□□□ 0.32
CHPF2-202ENST00000465601 NRAPQ86VF7 1730 aa17.04■□□□□ 0.32
CHPF2-202ENST00000465601 CAMTA1Q9Y6Y1 1673 aa17.04■□□□□ 0.32
CHPF2-202ENST00000465601 CGNL1Q0VF96 1302 aa17.03■□□□□ 0.32
CHPF2-202ENST00000465601 RGPD5Q99666 1765 aa17.03■□□□□ 0.32
CHPF2-202ENST00000465601 AXIN2Q9Y2T1 843 aa17.03■□□□□ 0.32
CHPF2-202ENST00000465601 AATKQ6ZMQ8 1374 aa17.02■□□□□ 0.32
CHPF2-202ENST00000465601 COL18A1P39060 1754 aa17.02■□□□□ 0.32
CHPF2-202ENST00000465601 LMO7Q8WWI1 1683 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms