RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 BRINP3Q76B58 766 aa18.27■□□□□ 0.52
ATF3-208ENST00000465155 IQSEC2Q5JU85 1478 aa18.27■□□□□ 0.52
ATF3-208ENST00000465155 NPC1L1Q9UHC9 1359 aa18.27■□□□□ 0.52
ATF3-208ENST00000465155 MIER1Q8N108 512 aa18.27■□□□□ 0.51
ATF3-208ENST00000465155 SSH2Q76I76 1423 aa18.26■□□□□ 0.51
ATF3-208ENST00000465155 PRKRIP1Q9H875 184 aaPredicted RBP18.26■□□□□ 0.51
ATF3-208ENST00000465155 ANKRD26Q9UPS8 1709 aa18.26■□□□□ 0.51
ATF3-208ENST00000465155 TTC21BQ7Z4L5 1316 aa18.26■□□□□ 0.51
ATF3-208ENST00000465155 CERKQ8TCT0 537 aa18.25■□□□□ 0.51
ATF3-208ENST00000465155 NSD2O96028 1365 aa18.25■□□□□ 0.51
ATF3-208ENST00000465155 ROBO1Q9Y6N7 1651 aa18.25■□□□□ 0.51
ATF3-208ENST00000465155 FYB1O15117 783 aa18.24■□□□□ 0.51
ATF3-208ENST00000465155 XPCQ01831 940 aaPredicted RBP18.24■□□□□ 0.51
ATF3-208ENST00000465155 NME9Q86XW9 330 aa18.23■□□□□ 0.51
ATF3-208ENST00000465155 DDX17Q92841 729 aaKnown RBP18.23■□□□□ 0.51
ATF3-208ENST00000465155 GGNBP2Q9H3C7 697 aa18.23■□□□□ 0.51
ATF3-208ENST00000465155 NPHP3Q7Z494 1330 aa18.23■□□□□ 0.51
ATF3-208ENST00000465155 TTC21AQ8NDW8 1320 aa18.23■□□□□ 0.51
ATF3-208ENST00000465155 TRPM3Q9HCF6 1732 aaPredicted RBP18.23■□□□□ 0.51
ATF3-208ENST00000465155 TOM1O60784 492 aa18.23■□□□□ 0.51
ATF3-208ENST00000465155 PAK3O75914 559 aaPredicted RBP18.23■□□□□ 0.51
ATF3-208ENST00000465155 KRT28Q7Z3Y7 464 aa18.23■□□□□ 0.51
ATF3-208ENST00000465155 BRD4O60885 1362 aaPredicted RBP18.23■□□□□ 0.51
ATF3-208ENST00000465155 PARD3Q8TEW0 1356 aa18.23■□□□□ 0.51
ATF3-208ENST00000465155 PIK3C2AO00443 1686 aa18.22■□□□□ 0.51
ATF3-208ENST00000465155 NHSL1Q5SYE7 1610 aa18.22■□□□□ 0.51
ATF3-208ENST00000465155 RALBP1Q15311 655 aa18.21■□□□□ 0.51
ATF3-208ENST00000465155 UBAP1LF5GYI3 381 aa18.2■□□□□ 0.5
ATF3-208ENST00000465155 PXDNQ92626 1479 aa18.2■□□□□ 0.5
ATF3-208ENST00000465155 MORC1Q86VD1 984 aa18.2■□□□□ 0.5
ATF3-208ENST00000465155 ZRANB1Q9UGI0 708 aa18.2■□□□□ 0.5
ATF3-208ENST00000465155 PIP4K2BP78356 416 aa18.18■□□□□ 0.5
ATF3-208ENST00000465155 ABTB2Q8N961 1025 aa18.18■□□□□ 0.5
ATF3-208ENST00000465155 ALS2Q96Q42 1657 aa18.17■□□□□ 0.5
ATF3-208ENST00000465155 COG3Q96JB2 828 aa18.17■□□□□ 0.5
ATF3-208ENST00000465155 MYBBP1AQ9BQG0 1328 aaKnown RBP18.17■□□□□ 0.5
ATF3-208ENST00000465155 TNNT2P45379 298 aaPredicted RBP18.16■□□□□ 0.5
ATF3-208ENST00000465155 MARF1Q9Y4F3 1742 aaKnown RBP18.16■□□□□ 0.5
ATF3-208ENST00000465155 OVOS2A0A0J9YW53 1432 aa18.16■□□□□ 0.5
ATF3-208ENST00000465155 OVOS2Q6IE36 1432 aa18.16■□□□□ 0.5
ATF3-208ENST00000465155 SBNO1A3KN83 1393 aa18.16■□□□□ 0.5
ATF3-208ENST00000465155 USP54Q70EL1 1684 aa18.16■□□□□ 0.5
ATF3-208ENST00000465155 NUTM2GQ5VZR2 741 aa18.16■□□□□ 0.5
ATF3-208ENST00000465155 SOS2Q07890 1332 aaPredicted RBP18.15■□□□□ 0.5
ATF3-208ENST00000465155 AHDC1Q5TGY3 1603 aaPredicted RBP18.15■□□□□ 0.5
ATF3-208ENST00000465155 NLRP6P59044 892 aa18.15■□□□□ 0.5
ATF3-208ENST00000465155 LMOD2Q6P5Q4 547 aa18.15■□□□□ 0.5
ATF3-208ENST00000465155 USP31Q70CQ4 1352 aa18.15■□□□□ 0.5
ATF3-208ENST00000465155 TNS3Q68CZ2 1445 aa18.13■□□□□ 0.49
ATF3-208ENST00000465155 PHLPP1O60346 1717 aa18.13■□□□□ 0.49
ATF3-208ENST00000465155 PPP2R1AP30153 589 aa18.12■□□□□ 0.49
ATF3-208ENST00000465155 SPATA31A3Q5VYP0 1347 aa18.12■□□□□ 0.49
ATF3-208ENST00000465155 MAP2P11137 1827 aaKnown RBP18.12■□□□□ 0.49
ATF3-208ENST00000465155 CCER2I3L3R5 266 aa18.11■□□□□ 0.49
ATF3-208ENST00000465155 NLRP13Q86W25 1043 aa18.11■□□□□ 0.49
ATF3-208ENST00000465155 CNKSR2Q8WXI2 1034 aa18.1■□□□□ 0.49
ATF3-208ENST00000465155 ARHGEF10O15013 1369 aa18.09■□□□□ 0.49
ATF3-208ENST00000465155 SOX12O15370 315 aa18.09■□□□□ 0.49
ATF3-208ENST00000465155 PLEKHG5O94827 1062 aa18.09■□□□□ 0.49
ATF3-208ENST00000465155 FBLN1P23142 703 aa18.09■□□□□ 0.49
ATF3-208ENST00000465155 CCDC184Q52MB2 194 aa18.09■□□□□ 0.49
ATF3-208ENST00000465155 COL16A1Q07092 1604 aaPredicted RBP18.07■□□□□ 0.48
ATF3-208ENST00000465155 AATKQ6ZMQ8 1374 aa18.07■□□□□ 0.48
ATF3-208ENST00000465155 MRS2Q9HD23 443 aa18.07■□□□□ 0.48
ATF3-208ENST00000465155 SLIT3O75094 1523 aa18.07■□□□□ 0.48
ATF3-208ENST00000465155 CRYBG1Q9Y4K1 1723 aa18.06■□□□□ 0.48
ATF3-208ENST00000465155 MED1Q15648 1581 aaPredicted RBP18.06■□□□□ 0.48
ATF3-208ENST00000465155 PHRF1Q9P1Y6 1649 aaKnown RBP18.06■□□□□ 0.48
ATF3-208ENST00000465155 MTHFSP49914 203 aa18.06■□□□□ 0.48
ATF3-208ENST00000465155 LRRC59Q96AG4 307 aaKnown RBP18.06■□□□□ 0.48
ATF3-208ENST00000465155 USP19O94966 1318 aa18.06■□□□□ 0.48
ATF3-208ENST00000465155 NCBP3Q53F19 620 aaKnown RBP18.05■□□□□ 0.48
ATF3-208ENST00000465155 RRS1Q15050 365 aaKnown RBP18.05■□□□□ 0.48
ATF3-208ENST00000465155 POLKQ9UBT6 870 aa18.05■□□□□ 0.48
ATF3-208ENST00000465155 NFAT5O94916 1531 aa18.04■□□□□ 0.48
ATF3-208ENST00000465155 KCNH5Q8NCM2 988 aa18.04■□□□□ 0.48
ATF3-208ENST00000465155 LTN1O94822 1766 aa18.04■□□□□ 0.48
ATF3-208ENST00000465155 GCP02774 474 aa18.03■□□□□ 0.48
ATF3-208ENST00000465155 EMILIN1Q9Y6C2 1016 aa18.03■□□□□ 0.48
ATF3-208ENST00000465155 ABCA3Q99758 1704 aa18.02■□□□□ 0.48
ATF3-208ENST00000465155 PPM1GO15355 546 aaPredicted RBP18.02■□□□□ 0.48
ATF3-208ENST00000465155 CABLES1Q8TDN4 633 aa18.02■□□□□ 0.48
ATF3-208ENST00000465155 SMG6Q86US8 1419 aaKnown RBP18.02■□□□□ 0.48
ATF3-208ENST00000465155 PEAK1Q9H792 1746 aa18.01■□□□□ 0.47
ATF3-208ENST00000465155 MAP3K19Q56UN5 1328 aa18.01■□□□□ 0.47
ATF3-208ENST00000465155 COL22A1Q8NFW1 1626 aaPredicted RBP18.01■□□□□ 0.47
ATF3-208ENST00000465155 CFAP53Q96M91 514 aa18■□□□□ 0.47
ATF3-208ENST00000465155 PNPLA6Q8IY17 1366 aa17.99■□□□□ 0.47
ATF3-208ENST00000465155 CDK12Q9NYV4 1490 aaPredicted RBP17.99■□□□□ 0.47
ATF3-208ENST00000465155 ZBTB7CA1YPR0 619 aa17.98■□□□□ 0.47
ATF3-208ENST00000465155 HAP1P54257 671 aaPredicted RBP17.98■□□□□ 0.47
ATF3-208ENST00000465155 AMPHP49418 695 aa17.97■□□□□ 0.47
ATF3-208ENST00000465155 ZC3H6P61129 1189 aaKnown RBP17.97■□□□□ 0.47
ATF3-208ENST00000465155 SHPRHQ149N8 1683 aa17.97■□□□□ 0.47
ATF3-208ENST00000465155 COL3A1P02461 1466 aaPredicted RBP17.96■□□□□ 0.47
ATF3-208ENST00000465155 FLT4P35916 1363 aa17.96■□□□□ 0.47
ATF3-208ENST00000465155 ARHGEF25Q86VW2 580 aa17.95■□□□□ 0.46
ATF3-208ENST00000465155 FAM9BQ8IZU0 186 aa17.95■□□□□ 0.46
ATF3-208ENST00000465155 INSRP06213 1382 aa17.95■□□□□ 0.46
ATF3-208ENST00000465155 KIF24Q5T7B8 1368 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms