RNA–Protein interactions for RNA: ENST00000464876.5

ABCA2-212, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 2

Gene ABCA2, Length 3,438 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-212ENST00000464876 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.24■□□□□ 0.35
ABCA2-212ENST00000464876 TRIM35Q9UPQ4 493 aa17.24■□□□□ 0.35
ABCA2-212ENST00000464876 NASPP49321 788 aaPredicted RBP17.24■□□□□ 0.35
ABCA2-212ENST00000464876 PKNOX2Q96KN3 472 aa17.23■□□□□ 0.35
ABCA2-212ENST00000464876 ZNF692Q9BU19 519 aaPredicted RBP17.23■□□□□ 0.35
ABCA2-212ENST00000464876 NUCB1Q02818 461 aa17.23■□□□□ 0.35
ABCA2-212ENST00000464876 TPRNQ4KMQ1 711 aa17.23■□□□□ 0.35
ABCA2-212ENST00000464876 KIF16BQ96L93 1317 aa17.23■□□□□ 0.35
ABCA2-212ENST00000464876 MCTP1Q6DN14 999 aa17.22■□□□□ 0.35
ABCA2-212ENST00000464876 TRPM2O94759 1503 aa17.22■□□□□ 0.35
ABCA2-212ENST00000464876 MYOM1P52179 1685 aa17.22■□□□□ 0.35
ABCA2-212ENST00000464876 PLXNC1O60486 1568 aa17.22■□□□□ 0.35
ABCA2-212ENST00000464876 TBC1D9Q6ZT07 1266 aa17.22■□□□□ 0.35
ABCA2-212ENST00000464876 GAS2L2Q8NHY3 880 aa17.22■□□□□ 0.35
ABCA2-212ENST00000464876 K7ELQ4 463 aaPredicted RBP17.21■□□□□ 0.35
ABCA2-212ENST00000464876 MSNP26038 577 aaKnown RBP17.21■□□□□ 0.35
ABCA2-212ENST00000464876 ADGRL1O94910 1474 aa17.21■□□□□ 0.35
ABCA2-212ENST00000464876 DIAPH1O60610 1272 aaKnown RBP17.21■□□□□ 0.34
ABCA2-212ENST00000464876 ZMYND15Q9H091 742 aa17.21■□□□□ 0.34
ABCA2-212ENST00000464876 CAVIN1Q6NZI2 390 aaKnown RBP17.2■□□□□ 0.34
ABCA2-212ENST00000464876 PRKAR2BP31323 418 aa17.2■□□□□ 0.34
ABCA2-212ENST00000464876 SKOR2Q2VWA4 1001 aaPredicted RBP17.2■□□□□ 0.34
ABCA2-212ENST00000464876 RBM10P98175 930 aaKnown RBP17.19■□□□□ 0.34
ABCA2-212ENST00000464876 RAB3GAP1Q15042 981 aa17.19■□□□□ 0.34
ABCA2-212ENST00000464876 RBM25P49756 843 aaKnown RBP17.19■□□□□ 0.34
ABCA2-212ENST00000464876 KIAA1211Q6ZU35 1233 aa17.19■□□□□ 0.34
ABCA2-212ENST00000464876 C14orf93Q9H972 538 aaKnown RBP17.19■□□□□ 0.34
ABCA2-212ENST00000464876 CT47B1P0C2W7 299 aaPredicted RBP17.18■□□□□ 0.34
ABCA2-212ENST00000464876 RTEL1-TNFRSF6BF6WH68 1400 aa17.18■□□□□ 0.34
ABCA2-212ENST00000464876 CFAP65Q6ZU64 1925 aaKnown RBP17.18■□□□□ 0.34
ABCA2-212ENST00000464876 ZNF518AQ6AHZ1 1483 aa17.18■□□□□ 0.34
ABCA2-212ENST00000464876 RRP9O43818 475 aaKnown RBP17.18■□□□□ 0.34
ABCA2-212ENST00000464876 ABCC1P33527 1531 aa17.17■□□□□ 0.34
ABCA2-212ENST00000464876 CALD1Q05682 793 aaKnown RBP17.17■□□□□ 0.34
ABCA2-212ENST00000464876 BMP2KLQ5H9B9 411 aa17.17■□□□□ 0.34
ABCA2-212ENST00000464876 SNX21Q969T3 373 aa17.17■□□□□ 0.34
ABCA2-212ENST00000464876 CIZ1Q9ULV3 898 aaPredicted RBP17.17■□□□□ 0.34
ABCA2-212ENST00000464876 VIRMAQ69YN4 1812 aaKnown RBP17.16■□□□□ 0.34
ABCA2-212ENST00000464876 TSPYL6Q8N831 410 aa17.16■□□□□ 0.34
ABCA2-212ENST00000464876 CD109Q6YHK3 1445 aa17.16■□□□□ 0.34
ABCA2-212ENST00000464876 CEP152O94986 1710 aa17.16■□□□□ 0.34
ABCA2-212ENST00000464876 FOXD4L6Q3SYB3 417 aaPredicted RBP17.16■□□□□ 0.34
ABCA2-212ENST00000464876 FOXD4L3Q6VB84 417 aaPredicted RBP17.16■□□□□ 0.34
ABCA2-212ENST00000464876 NOL8Q76FK4 1167 aaKnown RBP17.15■□□□□ 0.34
ABCA2-212ENST00000464876 ZMYM3Q14202 1370 aa17.15■□□□□ 0.34
ABCA2-212ENST00000464876 SPHKAPQ2M3C7 1700 aa17.15■□□□□ 0.34
ABCA2-212ENST00000464876 CHAMP1Q96JM3 812 aa17.15■□□□□ 0.34
ABCA2-212ENST00000464876 IQSEC2Q5JU85 1478 aa17.14■□□□□ 0.34
ABCA2-212ENST00000464876 BAG4O95429 457 aaKnown RBP17.14■□□□□ 0.33
ABCA2-212ENST00000464876 PLEKHF1Q96S99 279 aa17.14■□□□□ 0.33
ABCA2-212ENST00000464876 ATAD2Q6PL18 1390 aa17.14■□□□□ 0.33
ABCA2-212ENST00000464876 TERF2IPQ9NYB0 399 aa17.14■□□□□ 0.33
ABCA2-212ENST00000464876 FAM13BQ9NYF5 915 aa17.14■□□□□ 0.33
ABCA2-212ENST00000464876 ISY1Q9ULR0 285 aaKnown RBP17.14■□□□□ 0.33
ABCA2-212ENST00000464876 R3HCC1Q9Y3T6 440 aaKnown RBP17.14■□□□□ 0.33
ABCA2-212ENST00000464876 CDC45O75419 566 aa17.13■□□□□ 0.33
ABCA2-212ENST00000464876 KIF2CQ99661 725 aa17.13■□□□□ 0.33
ABCA2-212ENST00000464876 FYB1O15117 783 aa17.13■□□□□ 0.33
ABCA2-212ENST00000464876 C16orf71Q8IYS4 520 aaPredicted RBP17.13■□□□□ 0.33
ABCA2-212ENST00000464876 ABCA6Q8N139 1617 aa17.13■□□□□ 0.33
ABCA2-212ENST00000464876 PRPF40AO75400 957 aaKnown RBP17.12■□□□□ 0.33
ABCA2-212ENST00000464876 CCDC173Q0VFZ6 552 aa17.12■□□□□ 0.33
ABCA2-212ENST00000464876 PKP1Q13835 747 aa17.12■□□□□ 0.33
ABCA2-212ENST00000464876 RBM27Q9P2N5 1060 aaKnown RBP17.12■□□□□ 0.33
ABCA2-212ENST00000464876 VGFO15240 615 aaPredicted RBP17.12■□□□□ 0.33
ABCA2-212ENST00000464876 ANKRD36BQ8N2N9 1353 aa17.11■□□□□ 0.33
ABCA2-212ENST00000464876 RNF214Q8ND24 703 aa17.11■□□□□ 0.33
ABCA2-212ENST00000464876 GCC1Q96CN9 775 aa17.11■□□□□ 0.33
ABCA2-212ENST00000464876 PRAM1Q96QH2 718 aa17.11■□□□□ 0.33
ABCA2-212ENST00000464876 A0A1W2PP64 1363 aa17.11■□□□□ 0.33
ABCA2-212ENST00000464876 ZBTB7BO15156 539 aaPredicted RBP17.11■□□□□ 0.33
ABCA2-212ENST00000464876 HDGFL2Q7Z4V5 671 aaPredicted RBP17.11■□□□□ 0.33
ABCA2-212ENST00000464876 ZSCAN30Q86W11 494 aa17.11■□□□□ 0.33
ABCA2-212ENST00000464876 MPNDQ8N594 471 aa17.11■□□□□ 0.33
ABCA2-212ENST00000464876 PHACTR3Q96KR7 559 aa17.11■□□□□ 0.33
ABCA2-212ENST00000464876 SOX12O15370 315 aa17.1■□□□□ 0.33
ABCA2-212ENST00000464876 PTMSP20962 102 aa17.1■□□□□ 0.33
ABCA2-212ENST00000464876 DDIT3P35638 169 aa17.1■□□□□ 0.33
ABCA2-212ENST00000464876 FAM69CQ0P6D2 419 aa17.1■□□□□ 0.33
ABCA2-212ENST00000464876 DCTN1Q14203 1278 aa17.1■□□□□ 0.33
ABCA2-212ENST00000464876 CABP1Q9NZU7 370 aa17.1■□□□□ 0.33
ABCA2-212ENST00000464876 ABCC11Q96J66 1382 aa17.1■□□□□ 0.33
ABCA2-212ENST00000464876 SBNO2Q9Y2G9 1366 aa17.1■□□□□ 0.33
ABCA2-212ENST00000464876 MAP3K4Q9Y6R4 1608 aa17.09■□□□□ 0.33
ABCA2-212ENST00000464876 SMARCA5O60264 1052 aaPredicted RBP17.09■□□□□ 0.33
ABCA2-212ENST00000464876 XPCQ01831 940 aaPredicted RBP17.09■□□□□ 0.33
ABCA2-212ENST00000464876 MLECQ14165 292 aa17.09■□□□□ 0.33
ABCA2-212ENST00000464876 OTUD7AQ8TE49 926 aaPredicted RBP17.08■□□□□ 0.33
ABCA2-212ENST00000464876 TWISTNBQ3B726 338 aaPredicted RBP17.08■□□□□ 0.32
ABCA2-212ENST00000464876 KLHL40Q2TBA0 621 aa17.08■□□□□ 0.32
ABCA2-212ENST00000464876 SIRT2Q8IXJ6 389 aa17.08■□□□□ 0.32
ABCA2-212ENST00000464876 ZGPATQ8N5A5 531 aaKnown RBP17.08■□□□□ 0.32
ABCA2-212ENST00000464876 FAM83GA6ND36 823 aa17.07■□□□□ 0.32
ABCA2-212ENST00000464876 PTMAP06454 111 aaKnown RBP17.07■□□□□ 0.32
ABCA2-212ENST00000464876 ALDH1L2Q3SY69 923 aa17.07■□□□□ 0.32
ABCA2-212ENST00000464876 CHMP4BQ9H444 224 aaKnown RBP17.07■□□□□ 0.32
ABCA2-212ENST00000464876 PPIP5K1Q6PFW1 1433 aa17.07■□□□□ 0.32
ABCA2-212ENST00000464876 ZFYVE16Q7Z3T8 1539 aa17.07■□□□□ 0.32
ABCA2-212ENST00000464876 ATP7AQ04656 1500 aa17.06■□□□□ 0.32
ABCA2-212ENST00000464876 VAMP4O75379 141 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms