RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 GBP4Q96PP9 640 aa15.74■□□□□ 0.11
CLCNKA-204ENST00000464764 ZMYND15Q9H091 742 aa15.74■□□□□ 0.11
CLCNKA-204ENST00000464764 TET3O43151 1660 aa15.73■□□□□ 0.11
CLCNKA-204ENST00000464764 ELL2O00472 640 aaPredicted RBP15.73■□□□□ 0.11
CLCNKA-204ENST00000464764 TBC1D9Q6ZT07 1266 aa15.73■□□□□ 0.11
CLCNKA-204ENST00000464764 STK26Q9P289 416 aa15.73■□□□□ 0.11
CLCNKA-204ENST00000464764 CT47B1P0C2W7 299 aaPredicted RBP15.72■□□□□ 0.11
CLCNKA-204ENST00000464764 PKNOX2Q96KN3 472 aa15.72■□□□□ 0.11
CLCNKA-204ENST00000464764 THUMPD2Q9BTF0 503 aaKnown RBP15.72■□□□□ 0.11
CLCNKA-204ENST00000464764 GGT6Q6P531 493 aa15.72■□□□□ 0.11
CLCNKA-204ENST00000464764 RRP9O43818 475 aaKnown RBP15.71■□□□□ 0.1
CLCNKA-204ENST00000464764 CFAP65Q6ZU64 1925 aaKnown RBP15.71■□□□□ 0.1
CLCNKA-204ENST00000464764 GLIPR1L2Q4G1C9 344 aa15.7■□□□□ 0.1
CLCNKA-204ENST00000464764 K7ELQ4 463 aaPredicted RBP15.7■□□□□ 0.1
CLCNKA-204ENST00000464764 BMP2KLQ5H9B9 411 aa15.7■□□□□ 0.1
CLCNKA-204ENST00000464764 EVC2Q86UK5 1308 aa15.7■□□□□ 0.1
CLCNKA-204ENST00000464764 MROH2AA6NES4 1674 aa15.7■□□□□ 0.1
CLCNKA-204ENST00000464764 IPO8O15397 1037 aaKnown RBP15.69■□□□□ 0.1
CLCNKA-204ENST00000464764 SRPK2P78362 688 aaKnown RBP15.69■□□□□ 0.1
CLCNKA-204ENST00000464764 SIRT2Q8IXJ6 389 aa15.69■□□□□ 0.1
CLCNKA-204ENST00000464764 CIZ1Q9ULV3 898 aaPredicted RBP15.69■□□□□ 0.1
CLCNKA-204ENST00000464764 ZBTB7BO15156 539 aaPredicted RBP15.69■□□□□ 0.1
CLCNKA-204ENST00000464764 TSPYL6Q8N831 410 aa15.69■□□□□ 0.1
CLCNKA-204ENST00000464764 DDX49Q9Y6V7 483 aaKnown RBP15.69■□□□□ 0.1
CLCNKA-204ENST00000464764 NRXN1Q9ULB1 1477 aa15.68■□□□□ 0.1
CLCNKA-204ENST00000464764 DEPDC5O75140 1603 aa15.68■□□□□ 0.1
CLCNKA-204ENST00000464764 SHROOM2Q13796 1616 aa15.68■□□□□ 0.1
CLCNKA-204ENST00000464764 ANKRD36BQ8N2N9 1353 aa15.68■□□□□ 0.1
CLCNKA-204ENST00000464764 VWDEQ8N2E2 1590 aa15.68■□□□□ 0.1
CLCNKA-204ENST00000464764 NCLP19338 710 aaKnown RBP15.68■□□□□ 0.1
CLCNKA-204ENST00000464764 NASPP49321 788 aaPredicted RBP15.68■□□□□ 0.1
CLCNKA-204ENST00000464764 ATP7AQ04656 1500 aa15.68■□□□□ 0.1
CLCNKA-204ENST00000464764 ZCCHC11Q5TAX3 1644 aaKnown RBP15.67■□□□□ 0.1
CLCNKA-204ENST00000464764 PPIP5K1Q6PFW1 1433 aa15.67■□□□□ 0.1
CLCNKA-204ENST00000464764 FYB1O15117 783 aa15.67■□□□□ 0.1
CLCNKA-204ENST00000464764 ISY1Q9ULR0 285 aaKnown RBP15.67■□□□□ 0.1
CLCNKA-204ENST00000464764 KIF16BQ96L93 1317 aa15.67■□□□□ 0.1
CLCNKA-204ENST00000464764 PKP1Q13835 747 aa15.67■□□□□ 0.1
CLCNKA-204ENST00000464764 SKOR2Q2VWA4 1001 aaPredicted RBP15.67■□□□□ 0.1
CLCNKA-204ENST00000464764 A0A1W2PP64 1363 aa15.67■□□□□ 0.1
CLCNKA-204ENST00000464764 KIAA1211Q6ZU35 1233 aa15.66■□□□□ 0.1
CLCNKA-204ENST00000464764 CHAMP1Q96JM3 812 aa15.66■□□□□ 0.1
CLCNKA-204ENST00000464764 ATAD2Q6PL18 1390 aa15.66■□□□□ 0.1
CLCNKA-204ENST00000464764 BAG4O95429 457 aaKnown RBP15.66■□□□□ 0.1
CLCNKA-204ENST00000464764 NCBP3Q53F19 620 aaKnown RBP15.66■□□□□ 0.1
CLCNKA-204ENST00000464764 ARID3AQ99856 593 aa15.66■□□□□ 0.1
CLCNKA-204ENST00000464764 MCTP1Q6DN14 999 aa15.65■□□□□ 0.1
CLCNKA-204ENST00000464764 MYO3AQ8NEV4 1616 aa15.65■□□□□ 0.1
CLCNKA-204ENST00000464764 QRICH2Q9H0J4 1663 aa15.65■□□□□ 0.1
CLCNKA-204ENST00000464764 CHD1O14646 1710 aa15.65■□□□□ 0.1
CLCNKA-204ENST00000464764 FANCAO15360 1455 aa15.65■□□□□ 0.1
CLCNKA-204ENST00000464764 KIF1BO60333 1816 aa15.65■□□□□ 0.1
CLCNKA-204ENST00000464764 MROH1Q8NDA8 1641 aa15.65■□□□□ 0.1
CLCNKA-204ENST00000464764 ADGRB1O14514 1584 aa15.64■□□□□ 0.1
CLCNKA-204ENST00000464764 ADGRB2O60241 1585 aa15.64■□□□□ 0.1
CLCNKA-204ENST00000464764 DIAPH1O60610 1272 aaKnown RBP15.64■□□□□ 0.09
CLCNKA-204ENST00000464764 HMOX1P09601 288 aa15.64■□□□□ 0.09
CLCNKA-204ENST00000464764 C16orf71Q8IYS4 520 aaPredicted RBP15.64■□□□□ 0.09
CLCNKA-204ENST00000464764 PHACTR3Q96KR7 559 aa15.64■□□□□ 0.09
CLCNKA-204ENST00000464764 ABCC11Q96J66 1382 aa15.64■□□□□ 0.09
CLCNKA-204ENST00000464764 MINK1Q8N4C8 1332 aaPredicted RBP15.64■□□□□ 0.09
CLCNKA-204ENST00000464764 GSPT1P15170 499 aaKnown RBP15.64■□□□□ 0.09
CLCNKA-204ENST00000464764 PRKAR2BP31323 418 aa15.64■□□□□ 0.09
CLCNKA-204ENST00000464764 CAVIN1Q6NZI2 390 aaKnown RBP15.63■□□□□ 0.09
CLCNKA-204ENST00000464764 IL16Q14005 1332 aa15.63■□□□□ 0.09
CLCNKA-204ENST00000464764 RBM10P98175 930 aaKnown RBP15.63■□□□□ 0.09
CLCNKA-204ENST00000464764 TULP4Q9NRJ4 1543 aa15.62■□□□□ 0.09
CLCNKA-204ENST00000464764 VAMP4O75379 141 aa15.62■□□□□ 0.09
CLCNKA-204ENST00000464764 CCDC173Q0VFZ6 552 aa15.62■□□□□ 0.09
CLCNKA-204ENST00000464764 ALDH1L2Q3SY69 923 aa15.62■□□□□ 0.09
CLCNKA-204ENST00000464764 MRPL50Q8N5N7 158 aaKnown RBP15.62■□□□□ 0.09
CLCNKA-204ENST00000464764 EFCAB6Q5THR3 1501 aa15.62■□□□□ 0.09
CLCNKA-204ENST00000464764 AK9Q5TCS8 1911 aa15.62■□□□□ 0.09
CLCNKA-204ENST00000464764 PPP1R9BQ96SB3 815 aa15.62■□□□□ 0.09
CLCNKA-204ENST00000464764 ADGRL1O94910 1474 aa15.61■□□□□ 0.09
CLCNKA-204ENST00000464764 KLHL40Q2TBA0 621 aa15.61■□□□□ 0.09
CLCNKA-204ENST00000464764 GCC1Q96CN9 775 aa15.61■□□□□ 0.09
CLCNKA-204ENST00000464764 PPRC1Q5VV67 1664 aaKnown RBP15.61■□□□□ 0.09
CLCNKA-204ENST00000464764 IFT172Q9UG01 1749 aa15.61■□□□□ 0.09
CLCNKA-204ENST00000464764 NPATQ14207 1427 aa15.61■□□□□ 0.09
CLCNKA-204ENST00000464764 GOLGA6L22H0YM25 854 aa15.61■□□□□ 0.09
CLCNKA-204ENST00000464764 APBB1O00213 710 aa15.61■□□□□ 0.09
CLCNKA-204ENST00000464764 OTUD7AQ8TE49 926 aaPredicted RBP15.61■□□□□ 0.09
CLCNKA-204ENST00000464764 RBM27Q9P2N5 1060 aaKnown RBP15.61■□□□□ 0.09
CLCNKA-204ENST00000464764 ZSCAN30Q86W11 494 aa15.6■□□□□ 0.09
CLCNKA-204ENST00000464764 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.6■□□□□ 0.09
CLCNKA-204ENST00000464764 NSD2O96028 1365 aa15.6■□□□□ 0.09
CLCNKA-204ENST00000464764 ZBTB7CA1YPR0 619 aa15.6■□□□□ 0.09
CLCNKA-204ENST00000464764 SETBP1Q9Y6X0 1596 aa15.59■□□□□ 0.09
CLCNKA-204ENST00000464764 FOXD4L5Q5VV16 416 aaPredicted RBP15.59■□□□□ 0.09
CLCNKA-204ENST00000464764 FOXD4L4Q8WXT5 416 aaPredicted RBP15.59■□□□□ 0.09
CLCNKA-204ENST00000464764 RBSNQ9H1K0 784 aa15.59■□□□□ 0.09
CLCNKA-204ENST00000464764 ADGRB3O60242 1522 aa15.59■□□□□ 0.09
CLCNKA-204ENST00000464764 NEURL4Q96JN8 1562 aa15.59■□□□□ 0.09
CLCNKA-204ENST00000464764 COL3A1P02461 1466 aaPredicted RBP15.59■□□□□ 0.09
CLCNKA-204ENST00000464764 CDC45O75419 566 aa15.59■□□□□ 0.09
CLCNKA-204ENST00000464764 ZGPATQ8N5A5 531 aaKnown RBP15.59■□□□□ 0.09
CLCNKA-204ENST00000464764 PLEKHM2Q8IWE5 1019 aa15.59■□□□□ 0.09
CLCNKA-204ENST00000464764 ZSCAN23Q3MJ62 389 aa15.58■□□□□ 0.08
CLCNKA-204ENST00000464764 INO80Q9ULG1 1556 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms