RNA–Protein interactions for RNA: ENST00000464547.5

ATF3-207, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best)

Gene ATF3, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-207ENST00000464547 U2AF1L5P0DN76 240 aaPredicted RBP12.92□□□□□ -0.34
ATF3-207ENST00000464547 U2AF1Q01081 240 aaKnown RBP eCLIP12.92□□□□□ -0.34
ATF3-207ENST00000464547 DIP2AQ14689 1571 aa12.92□□□□□ -0.34
ATF3-207ENST00000464547 WWC1Q8IX03 1113 aa12.92□□□□□ -0.34
ATF3-207ENST00000464547 TCP11L2Q8N4U5 519 aa12.92□□□□□ -0.34
ATF3-207ENST00000464547 EXOC6Q8TAG9 804 aa12.92□□□□□ -0.34
ATF3-207ENST00000464547 AMOTL2Q9Y2J4 779 aa12.92□□□□□ -0.34
ATF3-207ENST00000464547 DMRT2Q9Y5R5 561 aa12.92□□□□□ -0.34
ATF3-207ENST00000464547 CEP170BQ9Y4F5 1589 aaPredicted RBP12.91□□□□□ -0.34
ATF3-207ENST00000464547 NCBP3Q53F19 620 aaKnown RBP12.91□□□□□ -0.34
ATF3-207ENST00000464547 RRP7AQ9Y3A4 280 aaKnown RBP12.91□□□□□ -0.34
ATF3-207ENST00000464547 PNPLA6Q8IY17 1366 aa12.91□□□□□ -0.34
ATF3-207ENST00000464547 MON2Q7Z3U7 1717 aa12.91□□□□□ -0.34
ATF3-207ENST00000464547 ADAMTSL3P82987 1691 aa12.9□□□□□ -0.34
ATF3-207ENST00000464547 AKAP12Q02952 1782 aa12.9□□□□□ -0.34
ATF3-207ENST00000464547 NME9Q86XW9 330 aa12.9□□□□□ -0.34
ATF3-207ENST00000464547 PTCH1Q13635 1447 aa12.89□□□□□ -0.35
ATF3-207ENST00000464547 PLIN1O60240 522 aa12.89□□□□□ -0.35
ATF3-207ENST00000464547 CCDC27Q2M243 656 aa12.89□□□□□ -0.35
ATF3-207ENST00000464547 CCDC136Q96JN2 1154 aa12.89□□□□□ -0.35
ATF3-207ENST00000464547 ZNF692Q9BU19 519 aaPredicted RBP12.89□□□□□ -0.35
ATF3-207ENST00000464547 ZRANB1Q9UGI0 708 aa12.89□□□□□ -0.35
ATF3-207ENST00000464547 NKTRP30414 1462 aaKnown RBP12.89□□□□□ -0.35
ATF3-207ENST00000464547 ITSN1Q15811 1721 aa12.88□□□□□ -0.35
ATF3-207ENST00000464547 PLEKHG3A1L390 1219 aa12.88□□□□□ -0.35
ATF3-207ENST00000464547 U2SURPO15042 1029 aaKnown RBP12.88□□□□□ -0.35
ATF3-207ENST00000464547 DIAPH1O60610 1272 aaKnown RBP12.88□□□□□ -0.35
ATF3-207ENST00000464547 WDR63Q8IWG1 891 aa12.88□□□□□ -0.35
ATF3-207ENST00000464547 PLEKHF1Q96S99 279 aa12.88□□□□□ -0.35
ATF3-207ENST00000464547 POLKQ9UBT6 870 aa12.88□□□□□ -0.35
ATF3-207ENST00000464547 TOPAZ1Q8N9V7 1692 aa12.88□□□□□ -0.35
ATF3-207ENST00000464547 XRN1Q8IZH2 1706 aaKnown RBP12.88□□□□□ -0.35
ATF3-207ENST00000464547 FBLN1P23142 703 aa12.87□□□□□ -0.35
ATF3-207ENST00000464547 NEUROD2Q15784 382 aa12.87□□□□□ -0.35
ATF3-207ENST00000464547 CRBNQ96SW2 442 aa12.87□□□□□ -0.35
ATF3-207ENST00000464547 AATKQ6ZMQ8 1374 aa12.86□□□□□ -0.35
ATF3-207ENST00000464547 PIK3R4Q99570 1358 aa12.86□□□□□ -0.35
ATF3-207ENST00000464547 ACEP12821 1306 aa12.86□□□□□ -0.35
ATF3-207ENST00000464547 NUTM2FA1L443 756 aa12.85□□□□□ -0.35
ATF3-207ENST00000464547 COG3Q96JB2 828 aa12.85□□□□□ -0.35
ATF3-207ENST00000464547 ZNF142P52746 1687 aaPredicted RBP12.85□□□□□ -0.35
ATF3-207ENST00000464547 TTC21BQ7Z4L5 1316 aa12.85□□□□□ -0.35
ATF3-207ENST00000464547 C20orf194Q5TEA3 1177 aa12.84□□□□□ -0.35
ATF3-207ENST00000464547 NRKQ7Z2Y5 1582 aa12.84□□□□□ -0.35
ATF3-207ENST00000464547 PPM1GO15355 546 aaPredicted RBP12.83□□□□□ -0.36
ATF3-207ENST00000464547 KCNA6P17658 529 aa12.83□□□□□ -0.36
ATF3-207ENST00000464547 TMPOP42166 694 aaKnown RBP12.83□□□□□ -0.36
ATF3-207ENST00000464547 ANKLE2Q86XL3 938 aa12.83□□□□□ -0.36
ATF3-207ENST00000464547 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.83□□□□□ -0.36
ATF3-207ENST00000464547 PNNQ9H307 717 aaKnown RBP12.83□□□□□ -0.36
ATF3-207ENST00000464547 EMILIN1Q9Y6C2 1016 aa12.83□□□□□ -0.36
ATF3-207ENST00000464547 CDK12Q9NYV4 1490 aaPredicted RBP12.83□□□□□ -0.36
ATF3-207ENST00000464547 USP6P35125 1406 aa12.82□□□□□ -0.36
ATF3-207ENST00000464547 SSH2Q76I76 1423 aa12.82□□□□□ -0.36
ATF3-207ENST00000464547 FCHSD2O94868 740 aa12.82□□□□□ -0.36
ATF3-207ENST00000464547 IL13P35225 146 aa12.82□□□□□ -0.36
ATF3-207ENST00000464547 MAPK8IP3Q9UPT6 1336 aa12.82□□□□□ -0.36
ATF3-207ENST00000464547 MAP2P11137 1827 aaKnown RBP12.81□□□□□ -0.36
ATF3-207ENST00000464547 BCAR3O75815 825 aa12.81□□□□□ -0.36
ATF3-207ENST00000464547 RSPH6AQ9H0K4 717 aa12.81□□□□□ -0.36
ATF3-207ENST00000464547 TRIM35Q9UPQ4 493 aa12.81□□□□□ -0.36
ATF3-207ENST00000464547 RBM19Q9Y4C8 960 aaKnown RBP12.81□□□□□ -0.36
ATF3-207ENST00000464547 OVOS2A0A0J9YW53 1432 aa12.8□□□□□ -0.36
ATF3-207ENST00000464547 OVOS2Q6IE36 1432 aa12.8□□□□□ -0.36
ATF3-207ENST00000464547 MYH16Q9H6N6 1097 aa12.8□□□□□ -0.36
ATF3-207ENST00000464547 ANKARQ7Z5J8 1434 aa12.79□□□□□ -0.36
ATF3-207ENST00000464547 LRRC7Q96NW7 1537 aa12.79□□□□□ -0.36
ATF3-207ENST00000464547 RRS1Q15050 365 aaKnown RBP12.79□□□□□ -0.36
ATF3-207ENST00000464547 PMFBP1Q8TBY8 1022 aa12.79□□□□□ -0.36
ATF3-207ENST00000464547 PRKAR2BP31323 418 aa12.78□□□□□ -0.36
ATF3-207ENST00000464547 RIPK4P57078 832 aa12.78□□□□□ -0.36
ATF3-207ENST00000464547 IL16Q14005 1332 aa12.78□□□□□ -0.36
ATF3-207ENST00000464547 TTC21AQ8NDW8 1320 aa12.78□□□□□ -0.36
ATF3-207ENST00000464547 USP31Q70CQ4 1352 aa12.78□□□□□ -0.36
ATF3-207ENST00000464547 FMN2Q9NZ56 1722 aa12.77□□□□□ -0.36
ATF3-207ENST00000464547 CHD2O14647 1828 aaKnown RBP12.77□□□□□ -0.37
ATF3-207ENST00000464547 NGDNQ8NEJ9 315 aaKnown RBP12.77□□□□□ -0.37
ATF3-207ENST00000464547 HMOX1P09601 288 aa12.76□□□□□ -0.37
ATF3-207ENST00000464547 RARSP54136 660 aaKnown RBP12.76□□□□□ -0.37
ATF3-207ENST00000464547 NPHP4O75161 1426 aaPredicted RBP12.76□□□□□ -0.37
ATF3-207ENST00000464547 NALCNQ8IZF0 1738 aa12.76□□□□□ -0.37
ATF3-207ENST00000464547 RGPD8O14715 1765 aaPredicted RBP12.76□□□□□ -0.37
ATF3-207ENST00000464547 NFE2L2Q16236 605 aa12.75□□□□□ -0.37
ATF3-207ENST00000464547 PHACTR3Q96KR7 559 aa12.75□□□□□ -0.37
ATF3-207ENST00000464547 FANCIQ9NVI1 1328 aa12.75□□□□□ -0.37
ATF3-207ENST00000464547 SETD1BQ9UPS6 1966 aaKnown RBP12.75□□□□□ -0.37
ATF3-207ENST00000464547 NEFMP07197 916 aa12.74□□□□□ -0.37
ATF3-207ENST00000464547 PDE3AQ14432 1141 aa12.74□□□□□ -0.37
ATF3-207ENST00000464547 CT47B1P0C2W7 299 aaPredicted RBP12.73□□□□□ -0.37
ATF3-207ENST00000464547 EXOSC9Q06265 439 aaKnown RBP12.73□□□□□ -0.37
ATF3-207ENST00000464547 EIF4A2Q14240 407 aaKnown RBP12.73□□□□□ -0.37
ATF3-207ENST00000464547 TSR2Q969E8 191 aaKnown RBP12.73□□□□□ -0.37
ATF3-207ENST00000464547 PEAK1Q9H792 1746 aa12.73□□□□□ -0.37
ATF3-207ENST00000464547 KDM2BQ8NHM5 1336 aa12.71□□□□□ -0.37
ATF3-207ENST00000464547 CANXP27824 592 aaKnown RBP12.71□□□□□ -0.37
ATF3-207ENST00000464547 PANK1Q8TE04 598 aa12.71□□□□□ -0.37
ATF3-207ENST00000464547 ADGRL3Q9HAR2 1447 aa12.71□□□□□ -0.38
ATF3-207ENST00000464547 PIK3C2AO00443 1686 aa12.7□□□□□ -0.38
ATF3-207ENST00000464547 HSP90AB2PQ58FF8 381 aa12.7□□□□□ -0.38
ATF3-207ENST00000464547 FRAT1Q92837 279 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms