RNA–Protein interactions for RNA: ENST00000464395.1

PITRM1-209, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 1 (best)

Gene PITRM1, Length 3,240 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-209ENST00000464395 CFAP53Q96M91 514 aa14.22□□□□□ -0.13
PITRM1-209ENST00000464395 CDK19Q9BWU1 502 aa14.22□□□□□ -0.13
PITRM1-209ENST00000464395 GGNBP2Q9H3C7 697 aa14.22□□□□□ -0.13
PITRM1-209ENST00000464395 USP19O94966 1318 aa14.22□□□□□ -0.13
PITRM1-209ENST00000464395 CLUAP1Q96AJ1 413 aa14.22□□□□□ -0.13
PITRM1-209ENST00000464395 FAM161AQ3B820 660 aa14.22□□□□□ -0.13
PITRM1-209ENST00000464395 FAM135BQ49AJ0 1406 aa14.21□□□□□ -0.13
PITRM1-209ENST00000464395 ITSN1Q15811 1721 aa14.21□□□□□ -0.14
PITRM1-209ENST00000464395 SRPK2P78362 688 aaKnown RBP14.2□□□□□ -0.14
PITRM1-209ENST00000464395 COG6Q9Y2V7 657 aa14.2□□□□□ -0.14
PITRM1-209ENST00000464395 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.2□□□□□ -0.14
PITRM1-209ENST00000464395 METP08581 1390 aa14.2□□□□□ -0.14
PITRM1-209ENST00000464395 TMPOP42166 694 aaKnown RBP14.2□□□□□ -0.14
PITRM1-209ENST00000464395 NEUROD2Q15784 382 aa14.2□□□□□ -0.14
PITRM1-209ENST00000464395 PCDHB15Q9Y5E8 787 aa14.2□□□□□ -0.14
PITRM1-209ENST00000464395 ZMYM3Q14202 1370 aa14.19□□□□□ -0.14
PITRM1-209ENST00000464395 NALCNQ8IZF0 1738 aa14.19□□□□□ -0.14
PITRM1-209ENST00000464395 IL16Q14005 1332 aa14.19□□□□□ -0.14
PITRM1-209ENST00000464395 AAMPQ13685 434 aa14.19□□□□□ -0.14
PITRM1-209ENST00000464395 TERF2IPQ9NYB0 399 aa14.19□□□□□ -0.14
PITRM1-209ENST00000464395 U2AF1L5P0DN76 240 aaPredicted RBP14.19□□□□□ -0.14
PITRM1-209ENST00000464395 U2AF1Q01081 240 aaKnown RBP eCLIP14.19□□□□□ -0.14
PITRM1-209ENST00000464395 CABP1Q9NZU7 370 aa14.19□□□□□ -0.14
PITRM1-209ENST00000464395 PPIP5K1Q6PFW1 1433 aa14.18□□□□□ -0.14
PITRM1-209ENST00000464395 NPM2Q86SE8 214 aaKnown RBP14.18□□□□□ -0.14
PITRM1-209ENST00000464395 CT47B1P0C2W7 299 aaPredicted RBP14.17□□□□□ -0.14
PITRM1-209ENST00000464395 WAPLQ7Z5K2 1190 aa14.17□□□□□ -0.14
PITRM1-209ENST00000464395 RGPD1P0DJD0 1748 aa14.16□□□□□ -0.14
PITRM1-209ENST00000464395 CDK12Q9NYV4 1490 aaPredicted RBP14.16□□□□□ -0.14
PITRM1-209ENST00000464395 SIRT1Q96EB6 747 aa14.16□□□□□ -0.14
PITRM1-209ENST00000464395 EDC4Q6P2E9 1401 aaKnown RBP14.16□□□□□ -0.14
PITRM1-209ENST00000464395 MYH16Q9H6N6 1097 aa14.16□□□□□ -0.14
PITRM1-209ENST00000464395 POLKQ9UBT6 870 aa14.16□□□□□ -0.14
PITRM1-209ENST00000464395 POGKQ9P215 609 aa14.15□□□□□ -0.14
PITRM1-209ENST00000464395 RSPH6AQ9H0K4 717 aa14.15□□□□□ -0.14
PITRM1-209ENST00000464395 SENP3Q9H4L4 574 aaPredicted RBP14.15□□□□□ -0.14
PITRM1-209ENST00000464395 AATKQ6ZMQ8 1374 aa14.14□□□□□ -0.15
PITRM1-209ENST00000464395 ADAMTS13Q76LX8 1427 aa14.14□□□□□ -0.15
PITRM1-209ENST00000464395 TSR2Q969E8 191 aaKnown RBP14.14□□□□□ -0.15
PITRM1-209ENST00000464395 PEAK1Q9H792 1746 aa14.13□□□□□ -0.15
PITRM1-209ENST00000464395 NBR1Q14596 966 aa14.13□□□□□ -0.15
PITRM1-209ENST00000464395 MVPQ14764 893 aaKnown RBP14.13□□□□□ -0.15
PITRM1-209ENST00000464395 SEC24BO95487 1268 aa14.12□□□□□ -0.15
PITRM1-209ENST00000464395 EXOSC9Q06265 439 aaKnown RBP14.12□□□□□ -0.15
PITRM1-209ENST00000464395 HDGFL2Q7Z4V5 671 aaPredicted RBP14.12□□□□□ -0.15
PITRM1-209ENST00000464395 BCL2L13Q9BXK5 485 aa14.12□□□□□ -0.15
PITRM1-209ENST00000464395 WASLO00401 505 aaPredicted RBP14.12□□□□□ -0.15
PITRM1-209ENST00000464395 DIAPH1O60610 1272 aaKnown RBP14.12□□□□□ -0.15
PITRM1-209ENST00000464395 FBLN1P23142 703 aa14.12□□□□□ -0.15
PITRM1-209ENST00000464395 DEKP35659 375 aaKnown RBP14.12□□□□□ -0.15
PITRM1-209ENST00000464395 RGS3P49796 1198 aa14.11□□□□□ -0.15
PITRM1-209ENST00000464395 FRAT1Q92837 279 aaPredicted RBP14.11□□□□□ -0.15
PITRM1-209ENST00000464395 FCHSD2O94868 740 aa14.11□□□□□ -0.15
PITRM1-209ENST00000464395 BRPF1P55201 1214 aaPredicted RBP14.11□□□□□ -0.15
PITRM1-209ENST00000464395 SSH1Q8WYL5 1049 aa14.11□□□□□ -0.15
PITRM1-209ENST00000464395 DDRGK1Q96HY6 314 aa14.11□□□□□ -0.15
PITRM1-209ENST00000464395 MAPK8IP3Q9UPT6 1336 aa14.11□□□□□ -0.15
PITRM1-209ENST00000464395 IL13P35225 146 aa14.1□□□□□ -0.15
PITRM1-209ENST00000464395 RIMS1Q86UR5 1692 aaKnown RBP14.1□□□□□ -0.15
PITRM1-209ENST00000464395 TRIM27P14373 513 aa14.1□□□□□ -0.15
PITRM1-209ENST00000464395 PRR36Q9H6K5 1346 aa14.09□□□□□ -0.15
PITRM1-209ENST00000464395 PMFBP1Q8TBY8 1022 aa14.09□□□□□ -0.15
PITRM1-209ENST00000464395 MARF1Q9Y4F3 1742 aaKnown RBP14.09□□□□□ -0.15
PITRM1-209ENST00000464395 TMEM2Q9UHN6 1383 aa14.09□□□□□ -0.15
PITRM1-209ENST00000464395 U2SURPO15042 1029 aaKnown RBP14.09□□□□□ -0.15
PITRM1-209ENST00000464395 ZKSCAN2Q63HK3 967 aa14.09□□□□□ -0.15
PITRM1-209ENST00000464395 ZNF853P0CG23 659 aa14.08□□□□□ -0.16
PITRM1-209ENST00000464395 RIPK4P57078 832 aa14.08□□□□□ -0.16
PITRM1-209ENST00000464395 PHACTR3Q96KR7 559 aa14.08□□□□□ -0.16
PITRM1-209ENST00000464395 PIK3R4Q99570 1358 aa14.08□□□□□ -0.16
PITRM1-209ENST00000464395 ROBO2Q9HCK4 1378 aa14.08□□□□□ -0.16
PITRM1-209ENST00000464395 FMN2Q9NZ56 1722 aa14.08□□□□□ -0.16
PITRM1-209ENST00000464395 SSH2Q76I76 1423 aa14.08□□□□□ -0.16
PITRM1-209ENST00000464395 DZIP1LQ8IYY4 767 aaKnown RBP14.07□□□□□ -0.16
PITRM1-209ENST00000464395 ZRANB1Q9UGI0 708 aa14.07□□□□□ -0.16
PITRM1-209ENST00000464395 PDZRN3Q9UPQ7 1066 aa14.07□□□□□ -0.16
PITRM1-209ENST00000464395 NCKAP5LQ9HCH0 1330 aa14.07□□□□□ -0.16
PITRM1-209ENST00000464395 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.07□□□□□ -0.16
PITRM1-209ENST00000464395 HDAC1Q13547 482 aaPredicted RBP14.07□□□□□ -0.16
PITRM1-209ENST00000464395 USP35Q9P2H5 1018 aa14.07□□□□□ -0.16
PITRM1-209ENST00000464395 TNRQ92752 1358 aa14.07□□□□□ -0.16
PITRM1-209ENST00000464395 PTPRUQ92729 1446 aa14.06□□□□□ -0.16
PITRM1-209ENST00000464395 RGPD8O14715 1765 aaPredicted RBP14.06□□□□□ -0.16
PITRM1-209ENST00000464395 USP54Q70EL1 1684 aa14.06□□□□□ -0.16
PITRM1-209ENST00000464395 NME9Q86XW9 330 aa14.06□□□□□ -0.16
PITRM1-209ENST00000464395 SLIT1O75093 1534 aa14.06□□□□□ -0.16
PITRM1-209ENST00000464395 OVOS2A0A0J9YW53 1432 aa14.06□□□□□ -0.16
PITRM1-209ENST00000464395 PTCH1Q13635 1447 aa14.06□□□□□ -0.16
PITRM1-209ENST00000464395 OVOS2Q6IE36 1432 aa14.06□□□□□ -0.16
PITRM1-209ENST00000464395 ARHGAP23Q9P227 1491 aa14.06□□□□□ -0.16
PITRM1-209ENST00000464395 CANXP27824 592 aaKnown RBP14.05□□□□□ -0.16
PITRM1-209ENST00000464395 ATF7IPQ6VMQ6 1270 aa14.05□□□□□ -0.16
PITRM1-209ENST00000464395 EMILIN1Q9Y6C2 1016 aa14.05□□□□□ -0.16
PITRM1-209ENST00000464395 ALDH1L2Q3SY69 923 aa14.05□□□□□ -0.16
PITRM1-209ENST00000464395 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.05□□□□□ -0.16
PITRM1-209ENST00000464395 STAG3Q9UJ98 1225 aa14.05□□□□□ -0.16
PITRM1-209ENST00000464395 LAS1LQ9Y4W2 734 aaKnown RBP14.05□□□□□ -0.16
PITRM1-209ENST00000464395 SLC4A3P48751 1232 aa14.05□□□□□ -0.16
PITRM1-209ENST00000464395 NUDT16Q96DE0 195 aaKnown RBP14.05□□□□□ -0.16
PITRM1-209ENST00000464395 ZBTB40Q9NUA8 1239 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms