RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 RLBP1P12271 317 aa11.06□□□□□ -0.64
HPS4-208ENST00000464362 IFFO2Q5TF58 517 aa11.06□□□□□ -0.64
HPS4-208ENST00000464362 SLC26A8Q96RN1 970 aa11.06□□□□□ -0.64
HPS4-208ENST00000464362 GRPEL1Q9HAV7 217 aa11.06□□□□□ -0.64
HPS4-208ENST00000464362 EMILIN1Q9Y6C2 1016 aa11.06□□□□□ -0.64
HPS4-208ENST00000464362 RBM10P98175 930 aaKnown RBP11.05□□□□□ -0.64
HPS4-208ENST00000464362 NKTRP30414 1462 aaKnown RBP11.05□□□□□ -0.64
HPS4-208ENST00000464362 SF3A1Q15459 793 aaKnown RBP11.05□□□□□ -0.64
HPS4-208ENST00000464362 C8orf34Q49A92 452 aa11.05□□□□□ -0.64
HPS4-208ENST00000464362 MCM10Q7L590 875 aa11.05□□□□□ -0.64
HPS4-208ENST00000464362 ZNF592Q92610 1267 aa11.05□□□□□ -0.64
HPS4-208ENST00000464362 SMC3Q9UQE7 1217 aa11.05□□□□□ -0.64
HPS4-208ENST00000464362 K7ELQ4 463 aaPredicted RBP11.04□□□□□ -0.64
HPS4-208ENST00000464362 FIBPO43427 364 aa11.04□□□□□ -0.64
HPS4-208ENST00000464362 C1orf141Q5JVX7 400 aa11.04□□□□□ -0.64
HPS4-208ENST00000464362 FAM184AQ8NB25 1140 aa11.04□□□□□ -0.64
HPS4-208ENST00000464362 UGGT2Q9NYU1 1516 aa11.04□□□□□ -0.64
HPS4-208ENST00000464362 CREBRFQ8IUR6 639 aa11.04□□□□□ -0.64
HPS4-208ENST00000464362 GCC1Q96CN9 775 aa11.04□□□□□ -0.64
HPS4-208ENST00000464362 DMRT2Q9Y5R5 561 aa11.04□□□□□ -0.64
HPS4-208ENST00000464362 ZKSCAN1P17029 563 aaPredicted RBP11.04□□□□□ -0.64
HPS4-208ENST00000464362 UPF3BQ9BZI7 483 aaKnown RBP11.04□□□□□ -0.64
HPS4-208ENST00000464362 GPRASP1Q5JY77 1395 aa11.03□□□□□ -0.64
HPS4-208ENST00000464362 EIF4G3O43432 1585 aaKnown RBP11.03□□□□□ -0.64
HPS4-208ENST00000464362 BICD2Q8TD16 824 aa11.03□□□□□ -0.64
HPS4-208ENST00000464362 CUL7Q14999 1698 aa11.03□□□□□ -0.64
HPS4-208ENST00000464362 F6X3S4 739 aa11.03□□□□□ -0.64
HPS4-208ENST00000464362 NME9Q86XW9 330 aa11.03□□□□□ -0.64
HPS4-208ENST00000464362 GRIN2AQ12879 1464 aa11.03□□□□□ -0.64
HPS4-208ENST00000464362 FAM83GA6ND36 823 aa11.03□□□□□ -0.64
HPS4-208ENST00000464362 DDX54Q8TDD1 881 aaKnown RBP11.02□□□□□ -0.64
HPS4-208ENST00000464362 RABEP1Q15276 862 aa11.02□□□□□ -0.65
HPS4-208ENST00000464362 BECN2A8MW95 431 aa11.02□□□□□ -0.65
HPS4-208ENST00000464362 FBXO31Q5XUX0 539 aaPredicted RBP11.02□□□□□ -0.65
HPS4-208ENST00000464362 PARD3Q8TEW0 1356 aa11.02□□□□□ -0.65
HPS4-208ENST00000464362 ESPNB1AK53 854 aa11.01□□□□□ -0.65
HPS4-208ENST00000464362 HTATSF1O43719 755 aaKnown RBP11.01□□□□□ -0.65
HPS4-208ENST00000464362 PSME1Q06323 249 aa11.01□□□□□ -0.65
HPS4-208ENST00000464362 IDI1Q13907 227 aa11.01□□□□□ -0.65
HPS4-208ENST00000464362 ISY1Q9ULR0 285 aaKnown RBP11.01□□□□□ -0.65
HPS4-208ENST00000464362 ATP6V1DQ9Y5K8 247 aa11.01□□□□□ -0.65
HPS4-208ENST00000464362 KDM4AO75164 1064 aa11.01□□□□□ -0.65
HPS4-208ENST00000464362 CSPP1Q1MSJ5 1256 aa11.01□□□□□ -0.65
HPS4-208ENST00000464362 TSHZ3Q63HK5 1081 aa11.01□□□□□ -0.65
HPS4-208ENST00000464362 PANK2Q9BZ23 570 aa11.01□□□□□ -0.65
HPS4-208ENST00000464362 NUP153P49790 1475 aaKnown RBP11.01□□□□□ -0.65
HPS4-208ENST00000464362 SSFA2P28290 1259 aa11.01□□□□□ -0.65
HPS4-208ENST00000464362 G3BP1Q13283 466 aaKnown RBP eCLIP11.01□□□□□ -0.65
HPS4-208ENST00000464362 LARP6Q9BRS8 491 aaKnown RBP11.01□□□□□ -0.65
HPS4-208ENST00000464362 CARD14Q9BXL6 1004 aa11.01□□□□□ -0.65
HPS4-208ENST00000464362 ABTB2Q8N961 1025 aa11.01□□□□□ -0.65
HPS4-208ENST00000464362 FCHSD2O94868 740 aa11□□□□□ -0.65
HPS4-208ENST00000464362 NFE2L2Q16236 605 aa11□□□□□ -0.65
HPS4-208ENST00000464362 HDGFL1Q5TGJ6 251 aa11□□□□□ -0.65
HPS4-208ENST00000464362 RUFY2Q8WXA3 655 aa11□□□□□ -0.65
HPS4-208ENST00000464362 HDAC5Q9UQL6 1122 aa11□□□□□ -0.65
HPS4-208ENST00000464362 CTTNBP2Q8WZ74 1663 aa11□□□□□ -0.65
HPS4-208ENST00000464362 GOLGA6L19H0YKK7 550 aa11□□□□□ -0.65
HPS4-208ENST00000464362 NEXNQ0ZGT2 675 aa11□□□□□ -0.65
HPS4-208ENST00000464362 RBM42Q9BTD8 480 aaKnown RBP11□□□□□ -0.65
HPS4-208ENST00000464362 CHMP4AQ9BY43 222 aa11□□□□□ -0.65
HPS4-208ENST00000464362 GNAI2P04899 355 aa10.99□□□□□ -0.65
HPS4-208ENST00000464362 NEUROD6Q96NK8 337 aa10.99□□□□□ -0.65
HPS4-208ENST00000464362 SIL1Q9H173 461 aa10.99□□□□□ -0.65
HPS4-208ENST00000464362 TBC1D32Q96NH3 1257 aa10.99□□□□□ -0.65
HPS4-208ENST00000464362 ADAMTS12P58397 1594 aa10.99□□□□□ -0.65
HPS4-208ENST00000464362 CEBPZQ03701 1054 aaKnown RBP10.99□□□□□ -0.65
HPS4-208ENST00000464362 TNPO1Q92973 898 aaKnown RBP10.99□□□□□ -0.65
HPS4-208ENST00000464362 ERC2O15083 957 aa10.98□□□□□ -0.65
HPS4-208ENST00000464362 GNAI3P08754 354 aa10.98□□□□□ -0.65
HPS4-208ENST00000464362 CLASRPQ8N2M8 674 aaKnown RBP10.98□□□□□ -0.65
HPS4-208ENST00000464362 CT47B1P0C2W7 299 aaPredicted RBP10.98□□□□□ -0.65
HPS4-208ENST00000464362 SPC24Q8NBT2 197 aa10.98□□□□□ -0.65
HPS4-208ENST00000464362 NOS1P29475 1434 aa10.98□□□□□ -0.65
HPS4-208ENST00000464362 RIC3Q7Z5B4 369 aa10.98□□□□□ -0.65
HPS4-208ENST00000464362 NUTM1Q86Y26 1132 aa10.98□□□□□ -0.65
HPS4-208ENST00000464362 RBM33Q96EV2 1170 aaKnown RBP10.98□□□□□ -0.65
HPS4-208ENST00000464362 SLC52A1Q9NWF4 448 aa10.98□□□□□ -0.65
HPS4-208ENST00000464362 NINLQ9Y2I6 1382 aa10.97□□□□□ -0.65
HPS4-208ENST00000464362 PRAG1Q86YV5 1406 aa10.97□□□□□ -0.65
HPS4-208ENST00000464362 STK3Q13188 491 aa10.97□□□□□ -0.65
HPS4-208ENST00000464362 GDPD2Q9HCC8 539 aa10.97□□□□□ -0.65
HPS4-208ENST00000464362 NLRP2Q9NX02 1062 aa10.97□□□□□ -0.65
HPS4-208ENST00000464362 RALGAPBQ86X10 1494 aa10.97□□□□□ -0.65
HPS4-208ENST00000464362 CCDC30Q5VVM6 783 aa10.97□□□□□ -0.65
HPS4-208ENST00000464362 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.97□□□□□ -0.65
HPS4-208ENST00000464362 SYCE3A1L190 88 aa10.97□□□□□ -0.65
HPS4-208ENST00000464362 TTC5Q8N0Z6 440 aa10.97□□□□□ -0.65
HPS4-208ENST00000464362 NUDT16Q96DE0 195 aaKnown RBP10.97□□□□□ -0.65
HPS4-208ENST00000464362 FSD1Q9BTV5 496 aa10.97□□□□□ -0.65
HPS4-208ENST00000464362 RTEL1-TNFRSF6BF6WH68 1400 aa10.96□□□□□ -0.65
HPS4-208ENST00000464362 TBC1D9Q6ZT07 1266 aa10.96□□□□□ -0.65
HPS4-208ENST00000464362 LRRCC1Q9C099 1032 aa10.96□□□□□ -0.65
HPS4-208ENST00000464362 ATP10BO94823 1461 aa10.96□□□□□ -0.65
HPS4-208ENST00000464362 XPCQ01831 940 aaPredicted RBP10.96□□□□□ -0.65
HPS4-208ENST00000464362 SRGAP3O43295 1099 aa10.96□□□□□ -0.66
HPS4-208ENST00000464362 APPP05067 770 aa10.96□□□□□ -0.66
HPS4-208ENST00000464362 CWC27Q6UX04 472 aaKnown RBP10.96□□□□□ -0.66
HPS4-208ENST00000464362 CCAR2Q8N163 923 aaKnown RBP10.96□□□□□ -0.66
HPS4-208ENST00000464362 IFT57Q9NWB7 429 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms