RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 SLFN5Q08AF3 891 aa28.58■■■□□ 2.17
PDLIM2-216ENST00000464275 AMOTL2Q9Y2J4 779 aa28.58■■■□□ 2.17
PDLIM2-216ENST00000464275 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.57■■■□□ 2.16
PDLIM2-216ENST00000464275 ANP32EQ9BTT0 268 aa28.56■■■□□ 2.16
PDLIM2-216ENST00000464275 PRR36Q9H6K5 1346 aa28.56■■■□□ 2.16
PDLIM2-216ENST00000464275 TRMT2AQ8IZ69 625 aaKnown RBP28.55■■■□□ 2.16
PDLIM2-216ENST00000464275 ZNF692Q9BU19 519 aaPredicted RBP28.55■■■□□ 2.16
PDLIM2-216ENST00000464275 PIK3R4Q99570 1358 aa28.53■■■□□ 2.16
PDLIM2-216ENST00000464275 NRKQ7Z2Y5 1582 aa28.52■■■□□ 2.16
PDLIM2-216ENST00000464275 NCBP3Q53F19 620 aaKnown RBP28.52■■■□□ 2.16
PDLIM2-216ENST00000464275 PNPLA6Q8IY17 1366 aa28.52■■■□□ 2.16
PDLIM2-216ENST00000464275 E9PSI1 815 aa28.51■■■□□ 2.16
PDLIM2-216ENST00000464275 U2AF1L5P0DN76 240 aaPredicted RBP28.51■■■□□ 2.16
PDLIM2-216ENST00000464275 U2AF1Q01081 240 aaKnown RBP eCLIP28.51■■■□□ 2.16
PDLIM2-216ENST00000464275 NCKAP5LQ9HCH0 1330 aa28.51■■■□□ 2.16
PDLIM2-216ENST00000464275 CHD2O14647 1828 aaKnown RBP28.51■■■□□ 2.15
PDLIM2-216ENST00000464275 B4GALNT3Q6L9W6 998 aa28.51■■■□□ 2.15
PDLIM2-216ENST00000464275 TCP11L2Q8N4U5 519 aa28.5■■■□□ 2.15
PDLIM2-216ENST00000464275 RGPD8O14715 1765 aaPredicted RBP28.5■■■□□ 2.15
PDLIM2-216ENST00000464275 WWC1Q8IX03 1113 aa28.49■■■□□ 2.15
PDLIM2-216ENST00000464275 NKTRP30414 1462 aaKnown RBP28.48■■■□□ 2.15
PDLIM2-216ENST00000464275 FANCIQ9NVI1 1328 aa28.48■■■□□ 2.15
PDLIM2-216ENST00000464275 PLEKHG3A1L390 1219 aa28.48■■■□□ 2.15
PDLIM2-216ENST00000464275 CCDC27Q2M243 656 aa28.46■■■□□ 2.15
PDLIM2-216ENST00000464275 DIAPH1O60610 1272 aaKnown RBP28.46■■■□□ 2.15
PDLIM2-216ENST00000464275 NME9Q86XW9 330 aa28.46■■■□□ 2.15
PDLIM2-216ENST00000464275 PHF23Q9BUL5 403 aaPredicted RBP28.46■■■□□ 2.15
PDLIM2-216ENST00000464275 ANKLE2Q86XL3 938 aa28.45■■■□□ 2.14
PDLIM2-216ENST00000464275 AATKQ6ZMQ8 1374 aa28.45■■■□□ 2.14
PDLIM2-216ENST00000464275 SPINK5Q9NQ38 1064 aaPredicted RBP28.44■■■□□ 2.14
PDLIM2-216ENST00000464275 U2SURPO15042 1029 aaKnown RBP28.44■■■□□ 2.14
PDLIM2-216ENST00000464275 POLKQ9UBT6 870 aa28.44■■■□□ 2.14
PDLIM2-216ENST00000464275 COG3Q96JB2 828 aa28.42■■■□□ 2.14
PDLIM2-216ENST00000464275 WDR63Q8IWG1 891 aa28.42■■■□□ 2.14
PDLIM2-216ENST00000464275 ACEP12821 1306 aa28.41■■■□□ 2.14
PDLIM2-216ENST00000464275 CCDC136Q96JN2 1154 aa28.41■■■□□ 2.14
PDLIM2-216ENST00000464275 FMN2Q9NZ56 1722 aa28.41■■■□□ 2.14
PDLIM2-216ENST00000464275 NEUROD2Q15784 382 aa28.41■■■□□ 2.14
PDLIM2-216ENST00000464275 PNNQ9H307 717 aaKnown RBP28.41■■■□□ 2.14
PDLIM2-216ENST00000464275 RRP7AQ9Y3A4 280 aaKnown RBP28.41■■■□□ 2.14
PDLIM2-216ENST00000464275 DMRT2Q9Y5R5 561 aa28.41■■■□□ 2.14
PDLIM2-216ENST00000464275 CDK12Q9NYV4 1490 aaPredicted RBP28.4■■■□□ 2.14
PDLIM2-216ENST00000464275 PLEKHF1Q96S99 279 aa28.4■■■□□ 2.14
PDLIM2-216ENST00000464275 NALCNQ8IZF0 1738 aa28.39■■■□□ 2.14
PDLIM2-216ENST00000464275 USP6P35125 1406 aa28.39■■■□□ 2.14
PDLIM2-216ENST00000464275 EXOC6Q8TAG9 804 aa28.39■■■□□ 2.13
PDLIM2-216ENST00000464275 TTC21BQ7Z4L5 1316 aa28.38■■■□□ 2.13
PDLIM2-216ENST00000464275 ZRANB1Q9UGI0 708 aa28.38■■■□□ 2.13
PDLIM2-216ENST00000464275 NUTM2FA1L443 756 aa28.37■■■□□ 2.13
PDLIM2-216ENST00000464275 KCNA6P17658 529 aa28.37■■■□□ 2.13
PDLIM2-216ENST00000464275 PLIN1O60240 522 aa28.36■■■□□ 2.13
PDLIM2-216ENST00000464275 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.36■■■□□ 2.13
PDLIM2-216ENST00000464275 ANKARQ7Z5J8 1434 aa28.36■■■□□ 2.13
PDLIM2-216ENST00000464275 MAPK8IP3Q9UPT6 1336 aa28.35■■■□□ 2.13
PDLIM2-216ENST00000464275 FBLN1P23142 703 aa28.34■■■□□ 2.13
PDLIM2-216ENST00000464275 PPM1GO15355 546 aaPredicted RBP28.33■■■□□ 2.13
PDLIM2-216ENST00000464275 LRRC7Q96NW7 1537 aa28.33■■■□□ 2.13
PDLIM2-216ENST00000464275 SSH2Q76I76 1423 aa28.33■■■□□ 2.13
PDLIM2-216ENST00000464275 FCHSD2O94868 740 aa28.32■■■□□ 2.12
PDLIM2-216ENST00000464275 EMILIN1Q9Y6C2 1016 aa28.32■■■□□ 2.12
PDLIM2-216ENST00000464275 OVOS2A0A0J9YW53 1432 aa28.32■■■□□ 2.12
PDLIM2-216ENST00000464275 OVOS2Q6IE36 1432 aa28.32■■■□□ 2.12
PDLIM2-216ENST00000464275 TMPOP42166 694 aaKnown RBP28.31■■■□□ 2.12
PDLIM2-216ENST00000464275 TTC21AQ8NDW8 1320 aa28.3■■■□□ 2.12
PDLIM2-216ENST00000464275 CRBNQ96SW2 442 aa28.28■■■□□ 2.12
PDLIM2-216ENST00000464275 NPHP4O75161 1426 aaPredicted RBP28.27■■■□□ 2.12
PDLIM2-216ENST00000464275 IL13P35225 146 aa28.26■■■□□ 2.11
PDLIM2-216ENST00000464275 MYH16Q9H6N6 1097 aa28.26■■■□□ 2.11
PDLIM2-216ENST00000464275 PMFBP1Q8TBY8 1022 aa28.26■■■□□ 2.11
PDLIM2-216ENST00000464275 RSPH6AQ9H0K4 717 aa28.26■■■□□ 2.11
PDLIM2-216ENST00000464275 NGDNQ8NEJ9 315 aaKnown RBP28.24■■■□□ 2.11
PDLIM2-216ENST00000464275 USP31Q70CQ4 1352 aa28.24■■■□□ 2.11
PDLIM2-216ENST00000464275 NEFMP07197 916 aa28.24■■■□□ 2.11
PDLIM2-216ENST00000464275 RRS1Q15050 365 aaKnown RBP28.24■■■□□ 2.11
PDLIM2-216ENST00000464275 TRIM35Q9UPQ4 493 aa28.23■■■□□ 2.11
PDLIM2-216ENST00000464275 PIK3C2AO00443 1686 aa28.23■■■□□ 2.11
PDLIM2-216ENST00000464275 C20orf194Q5TEA3 1177 aa28.22■■■□□ 2.11
PDLIM2-216ENST00000464275 USP54Q70EL1 1684 aa28.22■■■□□ 2.11
PDLIM2-216ENST00000464275 DLG5Q8TDM6 1919 aa28.22■■■□□ 2.11
PDLIM2-216ENST00000464275 PRKAR2BP31323 418 aa28.21■■■□□ 2.11
PDLIM2-216ENST00000464275 IL16Q14005 1332 aa28.21■■■□□ 2.11
PDLIM2-216ENST00000464275 RIPK4P57078 832 aa28.2■■■□□ 2.11
PDLIM2-216ENST00000464275 PEAK1Q9H792 1746 aa28.2■■■□□ 2.11
PDLIM2-216ENST00000464275 BCAR3O75815 825 aa28.2■■■□□ 2.1
PDLIM2-216ENST00000464275 NWD1Q149M9 1564 aa28.18■■■□□ 2.1
PDLIM2-216ENST00000464275 MARF1Q9Y4F3 1742 aaKnown RBP28.17■■■□□ 2.1
PDLIM2-216ENST00000464275 ADGRL3Q9HAR2 1447 aa28.16■■■□□ 2.1
PDLIM2-216ENST00000464275 HMOX1P09601 288 aa28.15■■■□□ 2.1
PDLIM2-216ENST00000464275 RGPD1P0DJD0 1748 aa28.14■■■□□ 2.1
PDLIM2-216ENST00000464275 CT47B1P0C2W7 299 aaPredicted RBP28.14■■■□□ 2.1
PDLIM2-216ENST00000464275 RARSP54136 660 aaKnown RBP28.13■■■□□ 2.09
PDLIM2-216ENST00000464275 NFE2L2Q16236 605 aa28.13■■■□□ 2.09
PDLIM2-216ENST00000464275 PDE3AQ14432 1141 aa28.11■■■□□ 2.09
PDLIM2-216ENST00000464275 MSH5O43196 834 aa28.1■■■□□ 2.09
PDLIM2-216ENST00000464275 PHACTR3Q96KR7 559 aa28.1■■■□□ 2.09
PDLIM2-216ENST00000464275 EIF4A2Q14240 407 aaKnown RBP28.1■■■□□ 2.09
PDLIM2-216ENST00000464275 PHF8Q9UPP1 1060 aa28.08■■■□□ 2.09
PDLIM2-216ENST00000464275 CANXP27824 592 aaKnown RBP28.07■■■□□ 2.08
PDLIM2-216ENST00000464275 TSR2Q969E8 191 aaKnown RBP28.07■■■□□ 2.08
PDLIM2-216ENST00000464275 SBNO1A3KN83 1393 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms