RNA–Protein interactions for RNA: ENST00000464256.1

PAXBP1-206, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-206ENST00000464256 NUTM2AQ8IVF1 878 aaPredicted RBP35.43■■■■□ 3.26
PAXBP1-206ENST00000464256 ABCA3Q99758 1704 aa35.42■■■■□ 3.26
PAXBP1-206ENST00000464256 SLC24A1O60721 1099 aa35.42■■■■□ 3.26
PAXBP1-206ENST00000464256 POLR3GLQ9BT43 218 aa35.41■■■■□ 3.26
PAXBP1-206ENST00000464256 A0A1W2PP64 1363 aa35.39■■■■□ 3.26
PAXBP1-206ENST00000464256 CRYBG1Q9Y4K1 1723 aa35.39■■■■□ 3.26
PAXBP1-206ENST00000464256 SSH2Q76I76 1423 aa35.39■■■■□ 3.26
PAXBP1-206ENST00000464256 CABLES1Q8TDN4 633 aa35.39■■■■□ 3.26
PAXBP1-206ENST00000464256 NUTM2GQ5VZR2 741 aa35.38■■■■□ 3.25
PAXBP1-206ENST00000464256 SPATA31A6Q5VVP1 1343 aa35.38■■■■□ 3.25
PAXBP1-206ENST00000464256 PIK3C2AO00443 1686 aa35.37■■■■□ 3.25
PAXBP1-206ENST00000464256 KTN1Q86UP2 1357 aaKnown RBP35.36■■■■□ 3.25
PAXBP1-206ENST00000464256 ARHGEF10O15013 1369 aa35.33■■■■□ 3.25
PAXBP1-206ENST00000464256 CDCA8Q53HL2 280 aa35.33■■■■□ 3.25
PAXBP1-206ENST00000464256 MARF1Q9Y4F3 1742 aaKnown RBP35.32■■■■□ 3.24
PAXBP1-206ENST00000464256 NINLQ9Y2I6 1382 aa35.3■■■■□ 3.24
PAXBP1-206ENST00000464256 ZNF692Q9BU19 519 aaPredicted RBP35.3■■■■□ 3.24
PAXBP1-206ENST00000464256 PHRF1Q9P1Y6 1649 aaKnown RBP35.29■■■■□ 3.24
PAXBP1-206ENST00000464256 TTC21BQ7Z4L5 1316 aa35.29■■■■□ 3.24
PAXBP1-206ENST00000464256 ADAMTS2O95450 1211 aa35.29■■■■□ 3.24
PAXBP1-206ENST00000464256 KIF7Q2M1P5 1343 aa35.28■■■■□ 3.24
PAXBP1-206ENST00000464256 ABTB2Q8N961 1025 aa35.28■■■■□ 3.24
PAXBP1-206ENST00000464256 HDGFL2Q7Z4V5 671 aaPredicted RBP35.27■■■■□ 3.24
PAXBP1-206ENST00000464256 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.27■■■■□ 3.24
PAXBP1-206ENST00000464256 TERF2IPQ9NYB0 399 aa35.27■■■■□ 3.24
PAXBP1-206ENST00000464256 ANKRD36BQ8N2N9 1353 aa35.26■■■■□ 3.24
PAXBP1-206ENST00000464256 ZEB1P37275 1124 aaPredicted RBP35.25■■■■□ 3.23
PAXBP1-206ENST00000464256 ZRANB1Q9UGI0 708 aa35.24■■■■□ 3.23
PAXBP1-206ENST00000464256 BRD4O60885 1362 aaPredicted RBP35.23■■■■□ 3.23
PAXBP1-206ENST00000464256 EDC4Q6P2E9 1401 aaKnown RBP35.22■■■■□ 3.23
PAXBP1-206ENST00000464256 MEX3CQ5U5Q3 659 aaKnown RBP35.22■■■■□ 3.23
PAXBP1-206ENST00000464256 NME9Q86XW9 330 aa35.21■■■■□ 3.23
PAXBP1-206ENST00000464256 WASHC2AQ641Q2 1341 aa35.2■■■■□ 3.22
PAXBP1-206ENST00000464256 CARD14Q9BXL6 1004 aa35.19■■■■□ 3.22
PAXBP1-206ENST00000464256 C8orf37Q96NL8 207 aa35.18■■■■□ 3.22
PAXBP1-206ENST00000464256 NLRP6P59044 892 aa35.17■■■■□ 3.22
PAXBP1-206ENST00000464256 HAP1P54257 671 aaPredicted RBP35.17■■■■□ 3.22
PAXBP1-206ENST00000464256 RGS17Q9UGC6 210 aaPredicted RBP35.17■■■■□ 3.22
PAXBP1-206ENST00000464256 TTC21AQ8NDW8 1320 aa35.17■■■■□ 3.22
PAXBP1-206ENST00000464256 CCDC7Q96M83 1385 aa35.16■■■■□ 3.22
PAXBP1-206ENST00000464256 USP19O94966 1318 aa35.16■■■■□ 3.22
PAXBP1-206ENST00000464256 USP54Q70EL1 1684 aa35.14■■■■□ 3.22
PAXBP1-206ENST00000464256 KIF20BQ96Q89 1820 aa35.14■■■■□ 3.22
PAXBP1-206ENST00000464256 NSD3Q9BZ95 1437 aa35.13■■■■□ 3.21
PAXBP1-206ENST00000464256 SLIT3O75094 1523 aa35.12■■■■□ 3.21
PAXBP1-206ENST00000464256 NLRP13Q86W25 1043 aa35.12■■■■□ 3.21
PAXBP1-206ENST00000464256 PHF23Q9BUL5 403 aaPredicted RBP35.11■■■■□ 3.21
PAXBP1-206ENST00000464256 PLCH1Q4KWH8 1693 aa35.11■■■■□ 3.21
PAXBP1-206ENST00000464256 PANK3Q9H999 370 aa35.1■■■■□ 3.21
PAXBP1-206ENST00000464256 AFF2P51816 1311 aa35.09■■■■□ 3.21
PAXBP1-206ENST00000464256 NGLY1Q96IV0 654 aa35.08■■■■□ 3.21
PAXBP1-206ENST00000464256 SOX12O15370 315 aa35.08■■■■□ 3.21
PAXBP1-206ENST00000464256 ZC3H6P61129 1189 aaKnown RBP35.08■■■■□ 3.21
PAXBP1-206ENST00000464256 OVOS2A0A0J9YW53 1432 aa35.06■■■■□ 3.2
PAXBP1-206ENST00000464256 OVOS2Q6IE36 1432 aa35.06■■■■□ 3.2
PAXBP1-206ENST00000464256 USP31Q70CQ4 1352 aa35.06■■■■□ 3.2
PAXBP1-206ENST00000464256 KIAA0232Q92628 1395 aa35.06■■■■□ 3.2
PAXBP1-206ENST00000464256 FAM83GA6ND36 823 aa35.05■■■■□ 3.2
PAXBP1-206ENST00000464256 GCP02774 474 aa35.05■■■■□ 3.2
PAXBP1-206ENST00000464256 GGNBP2Q9H3C7 697 aa35.04■■■■□ 3.2
PAXBP1-206ENST00000464256 NFAT5O94916 1531 aa35.03■■■■□ 3.2
PAXBP1-206ENST00000464256 FYB1O15117 783 aa35.03■■■■□ 3.2
PAXBP1-206ENST00000464256 CHRNA2Q15822 529 aa35.03■■■■□ 3.2
PAXBP1-206ENST00000464256 COL14A1Q05707 1796 aaKnown RBP35.02■■■■□ 3.2
PAXBP1-206ENST00000464256 SLIT2O94813 1529 aa35■■■■□ 3.19
PAXBP1-206ENST00000464256 POTEAQ6S8J7 498 aa35■■■■□ 3.19
PAXBP1-206ENST00000464256 BCL9LQ86UU0 1499 aa34.99■■■■□ 3.19
PAXBP1-206ENST00000464256 NRAPQ86VF7 1730 aa34.99■■■■□ 3.19
PAXBP1-206ENST00000464256 LTN1O94822 1766 aa34.99■■■■□ 3.19
PAXBP1-206ENST00000464256 FBLN1P23142 703 aa34.98■■■■□ 3.19
PAXBP1-206ENST00000464256 FNBP4Q8N3X1 1017 aaPredicted RBP34.98■■■■□ 3.19
PAXBP1-206ENST00000464256 NWD2Q9ULI1 1742 aa34.98■■■■□ 3.19
PAXBP1-206ENST00000464256 RGPD5Q99666 1765 aa34.98■■■■□ 3.19
PAXBP1-206ENST00000464256 PRDM11Q9NQV5 511 aa34.98■■■■□ 3.19
PAXBP1-206ENST00000464256 ZBTB7CA1YPR0 619 aa34.97■■■■□ 3.19
PAXBP1-206ENST00000464256 LMO7Q8WWI1 1683 aa34.96■■■■□ 3.19
PAXBP1-206ENST00000464256 COL18A1P39060 1754 aa34.96■■■■□ 3.19
PAXBP1-206ENST00000464256 USP21Q9UK80 565 aa34.95■■■■□ 3.19
PAXBP1-206ENST00000464256 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.94■■■■□ 3.18
PAXBP1-206ENST00000464256 ANKRD26Q9UPS8 1709 aa34.94■■■■□ 3.18
PAXBP1-206ENST00000464256 CPDO75976 1380 aa34.94■■■■□ 3.18
PAXBP1-206ENST00000464256 COG3Q96JB2 828 aa34.93■■■■□ 3.18
PAXBP1-206ENST00000464256 BTG4Q9NY30 223 aa34.92■■■■□ 3.18
PAXBP1-206ENST00000464256 CAMTA1Q9Y6Y1 1673 aa34.92■■■■□ 3.18
PAXBP1-206ENST00000464256 CGNL1Q0VF96 1302 aa34.89■■■■□ 3.18
PAXBP1-206ENST00000464256 KCNH5Q8NCM2 988 aa34.89■■■■□ 3.18
PAXBP1-206ENST00000464256 ZNF772Q68DY9 489 aaPredicted RBP34.89■■■■□ 3.18
PAXBP1-206ENST00000464256 ARHGEF25Q86VW2 580 aa34.89■■■■□ 3.18
PAXBP1-206ENST00000464256 PER1O15534 1290 aaPredicted RBP34.87■■■■□ 3.17
PAXBP1-206ENST00000464256 UNC5CLQ8IV45 518 aa34.86■■■■□ 3.17
PAXBP1-206ENST00000464256 QTRT2Q9H974 415 aaKnown RBP34.86■■■■□ 3.17
PAXBP1-206ENST00000464256 ATRNO75882 1429 aa34.85■■■■□ 3.17
PAXBP1-206ENST00000464256 AXIN2Q9Y2T1 843 aa34.85■■■■□ 3.17
PAXBP1-206ENST00000464256 ILDR2Q71H61 639 aa34.84■■■■□ 3.17
PAXBP1-206ENST00000464256 KNSTRNQ9Y448 316 aa34.82■■■■□ 3.17
PAXBP1-206ENST00000464256 MAP2P11137 1827 aaKnown RBP34.82■■■■□ 3.16
PAXBP1-206ENST00000464256 AMER1Q5JTC6 1135 aaPredicted RBP34.82■■■■□ 3.16
PAXBP1-206ENST00000464256 AATKQ6ZMQ8 1374 aa34.8■■■■□ 3.16
PAXBP1-206ENST00000464256 GLI3P10071 1580 aa34.8■■■■□ 3.16
PAXBP1-206ENST00000464256 RRS1Q15050 365 aaKnown RBP34.8■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 943.5 ms