RNA–Protein interactions for RNA: ENST00000463936.1

RTN4R-204, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-204ENST00000463936 CDK19Q9BWU1 502 aa21.01■□□□□ 0.95
RTN4R-204ENST00000463936 CCDC9Q9Y3X0 531 aaKnown RBP21■□□□□ 0.95
RTN4R-204ENST00000463936 BLMP54132 1417 aaPredicted RBP21■□□□□ 0.95
RTN4R-204ENST00000463936 COL14A1Q05707 1796 aaKnown RBP20.98■□□□□ 0.95
RTN4R-204ENST00000463936 PAK3O75914 559 aaPredicted RBP20.98■□□□□ 0.95
RTN4R-204ENST00000463936 FAM98CQ17RN3 349 aaKnown RBP20.98■□□□□ 0.95
RTN4R-204ENST00000463936 EIF3AQ14152 1382 aaKnown RBP20.97■□□□□ 0.95
RTN4R-204ENST00000463936 KRT27Q7Z3Y8 459 aa20.97■□□□□ 0.95
RTN4R-204ENST00000463936 ZRANB1Q9UGI0 708 aa20.97■□□□□ 0.95
RTN4R-204ENST00000463936 TOPAZ1Q8N9V7 1692 aa20.96■□□□□ 0.95
RTN4R-204ENST00000463936 KIAA1210Q9ULL0 1709 aa20.96■□□□□ 0.95
RTN4R-204ENST00000463936 FAM182BQ5T319 152 aa20.96■□□□□ 0.95
RTN4R-204ENST00000463936 NUTM2GQ5VZR2 741 aa20.96■□□□□ 0.95
RTN4R-204ENST00000463936 POLR3AO14802 1390 aaPredicted RBP20.95■□□□□ 0.94
RTN4R-204ENST00000463936 ITSN1Q15811 1721 aa20.95■□□□□ 0.94
RTN4R-204ENST00000463936 CHRNA2Q15822 529 aa20.94■□□□□ 0.94
RTN4R-204ENST00000463936 NBPF8Q3BBV2 869 aa20.94■□□□□ 0.94
RTN4R-204ENST00000463936 ACEP12821 1306 aa20.94■□□□□ 0.94
RTN4R-204ENST00000463936 SPATA31A5Q5VU36 1347 aa20.94■□□□□ 0.94
RTN4R-204ENST00000463936 SPATA31A7Q8IWB4 1347 aa20.94■□□□□ 0.94
RTN4R-204ENST00000463936 KIAA0232Q92628 1395 aa20.93■□□□□ 0.94
RTN4R-204ENST00000463936 PHRF1Q9P1Y6 1649 aaKnown RBP20.93■□□□□ 0.94
RTN4R-204ENST00000463936 PLEKHG3A1L390 1219 aa20.92■□□□□ 0.94
RTN4R-204ENST00000463936 CCDC61Q9Y6R9 512 aa20.91■□□□□ 0.94
RTN4R-204ENST00000463936 THSD7AQ9UPZ6 1657 aa20.9■□□□□ 0.94
RTN4R-204ENST00000463936 ZC3H6P61129 1189 aaKnown RBP20.9■□□□□ 0.94
RTN4R-204ENST00000463936 PRDM11Q9NQV5 511 aa20.9■□□□□ 0.94
RTN4R-204ENST00000463936 SIN3AQ96ST3 1273 aa20.88■□□□□ 0.93
RTN4R-204ENST00000463936 CABP2Q9NPB3 220 aa20.88■□□□□ 0.93
RTN4R-204ENST00000463936 SPATA31A1Q5TZJ5 1347 aa20.87■□□□□ 0.93
RTN4R-204ENST00000463936 A0A0G2JS52 829 aa20.87■□□□□ 0.93
RTN4R-204ENST00000463936 MYT1Q01538 1121 aa20.87■□□□□ 0.93
RTN4R-204ENST00000463936 L3MBTL2Q969R5 705 aa20.87■□□□□ 0.93
RTN4R-204ENST00000463936 CAMTA1Q9Y6Y1 1673 aa20.86■□□□□ 0.93
RTN4R-204ENST00000463936 NRKQ7Z2Y5 1582 aa20.85■□□□□ 0.93
RTN4R-204ENST00000463936 STRN4Q9NRL3 753 aa20.84■□□□□ 0.93
RTN4R-204ENST00000463936 CENPJQ9HC77 1338 aaPredicted RBP20.83■□□□□ 0.93
RTN4R-204ENST00000463936 PPIP5K1Q6PFW1 1433 aa20.83■□□□□ 0.93
RTN4R-204ENST00000463936 LMO7Q8WWI1 1683 aa20.83■□□□□ 0.92
RTN4R-204ENST00000463936 USP19O94966 1318 aa20.82■□□□□ 0.92
RTN4R-204ENST00000463936 EN1Q05925 392 aaPredicted RBP20.82■□□□□ 0.92
RTN4R-204ENST00000463936 SF3B2Q13435 895 aaKnown RBP20.82■□□□□ 0.92
RTN4R-204ENST00000463936 ABTB2Q8N961 1025 aa20.82■□□□□ 0.92
RTN4R-204ENST00000463936 QRICH2Q9H0J4 1663 aa20.82■□□□□ 0.92
RTN4R-204ENST00000463936 SRPK2P78362 688 aaKnown RBP20.81■□□□□ 0.92
RTN4R-204ENST00000463936 LARP1Q6PKG0 1096 aaKnown RBP20.81■□□□□ 0.92
RTN4R-204ENST00000463936 TNS1Q9HBL0 1735 aaKnown RBP20.81■□□□□ 0.92
RTN4R-204ENST00000463936 PSDA5PKW4 1024 aaPredicted RBP20.8■□□□□ 0.92
RTN4R-204ENST00000463936 CABP1Q9NZU7 370 aa20.8■□□□□ 0.92
RTN4R-204ENST00000463936 SSH2Q76I76 1423 aa20.79■□□□□ 0.92
RTN4R-204ENST00000463936 USP35Q9P2H5 1018 aa20.79■□□□□ 0.92
RTN4R-204ENST00000463936 CPDO75976 1380 aa20.78■□□□□ 0.92
RTN4R-204ENST00000463936 GCP02774 474 aa20.78■□□□□ 0.92
RTN4R-204ENST00000463936 RGPD1P0DJD0 1748 aa20.78■□□□□ 0.92
RTN4R-204ENST00000463936 TRPM1Q7Z4N2 1603 aa20.78■□□□□ 0.92
RTN4R-204ENST00000463936 BAG6P46379 1132 aa20.77■□□□□ 0.92
RTN4R-204ENST00000463936 TRIM26Q12899 539 aaPredicted RBP20.77■□□□□ 0.92
RTN4R-204ENST00000463936 TRIM37O94972 964 aa20.75■□□□□ 0.91
RTN4R-204ENST00000463936 EZH2Q15910 746 aaKnown RBP20.75■□□□□ 0.91
RTN4R-204ENST00000463936 DISP2A7MBM2 1401 aa20.74■□□□□ 0.91
RTN4R-204ENST00000463936 USP6P35125 1406 aa20.74■□□□□ 0.91
RTN4R-204ENST00000463936 NEUROD1Q13562 356 aa20.74■□□□□ 0.91
RTN4R-204ENST00000463936 BARGINQ6ZT62 677 aa20.74■□□□□ 0.91
RTN4R-204ENST00000463936 CAMKK2Q96RR4 588 aa20.74■□□□□ 0.91
RTN4R-204ENST00000463936 EVA1CP58658 441 aa20.73■□□□□ 0.91
RTN4R-204ENST00000463936 NLRP13Q86W25 1043 aa20.73■□□□□ 0.91
RTN4R-204ENST00000463936 COL5A2P05997 1499 aaPredicted RBP20.72■□□□□ 0.91
RTN4R-204ENST00000463936 PIK3C2AO00443 1686 aa20.72■□□□□ 0.91
RTN4R-204ENST00000463936 COL18A1P39060 1754 aa20.72■□□□□ 0.91
RTN4R-204ENST00000463936 SLIT3O75094 1523 aa20.71■□□□□ 0.91
RTN4R-204ENST00000463936 LRP5O75197 1615 aa20.71■□□□□ 0.91
RTN4R-204ENST00000463936 NLRP6P59044 892 aa20.7■□□□□ 0.9
RTN4R-204ENST00000463936 FAM196AQ6ZSG2 479 aa20.7■□□□□ 0.9
RTN4R-204ENST00000463936 TCP11L2Q8N4U5 519 aa20.7■□□□□ 0.9
RTN4R-204ENST00000463936 AXIN2Q9Y2T1 843 aa20.7■□□□□ 0.9
RTN4R-204ENST00000463936 R3HDM1Q15032 1099 aaKnown RBP20.69■□□□□ 0.9
RTN4R-204ENST00000463936 BRD4O60885 1362 aaPredicted RBP20.67■□□□□ 0.9
RTN4R-204ENST00000463936 ZBTB7CA1YPR0 619 aa20.66■□□□□ 0.9
RTN4R-204ENST00000463936 EVC2Q86UK5 1308 aa20.66■□□□□ 0.9
RTN4R-204ENST00000463936 AKAP12Q02952 1782 aa20.65■□□□□ 0.9
RTN4R-204ENST00000463936 ROCK2O75116 1388 aaKnown RBP20.65■□□□□ 0.9
RTN4R-204ENST00000463936 AATKQ6ZMQ8 1374 aa20.65■□□□□ 0.9
RTN4R-204ENST00000463936 TTC21BQ7Z4L5 1316 aa20.65■□□□□ 0.9
RTN4R-204ENST00000463936 APBA3O96018 575 aa20.65■□□□□ 0.9
RTN4R-204ENST00000463936 RGPD5Q99666 1765 aa20.64■□□□□ 0.9
RTN4R-204ENST00000463936 PARP4Q9UKK3 1724 aaKnown RBP20.64■□□□□ 0.9
RTN4R-204ENST00000463936 CPSF1Q10570 1443 aaKnown RBP20.64■□□□□ 0.89
RTN4R-204ENST00000463936 PDE3BQ13370 1112 aa20.64■□□□□ 0.89
RTN4R-204ENST00000463936 PTF1AQ7RTS3 328 aa20.64■□□□□ 0.89
RTN4R-204ENST00000463936 PEAK1Q9H792 1746 aa20.64■□□□□ 0.89
RTN4R-204ENST00000463936 CRB1P82279 1406 aa20.63■□□□□ 0.89
RTN4R-204ENST00000463936 THRAP3Q9Y2W1 955 aaKnown RBP20.63■□□□□ 0.89
RTN4R-204ENST00000463936 RREB1Q92766 1687 aa20.63■□□□□ 0.89
RTN4R-204ENST00000463936 ARHGEF25Q86VW2 580 aa20.62■□□□□ 0.89
RTN4R-204ENST00000463936 NUP188Q5SRE5 1749 aa20.61■□□□□ 0.89
RTN4R-204ENST00000463936 LRRC37A3O60309 1634 aa20.6■□□□□ 0.89
RTN4R-204ENST00000463936 CD163L1Q9NR16 1453 aa20.59■□□□□ 0.89
RTN4R-204ENST00000463936 NFAT5O94916 1531 aa20.58■□□□□ 0.89
RTN4R-204ENST00000463936 SBF2Q86WG5 1849 aa20.58■□□□□ 0.89
RTN4R-204ENST00000463936 SOX12O15370 315 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms