RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 TRPM1Q7Z4N2 1603 aa17.1■□□□□ 0.33
RTCB-202ENST00000463455 NWD2Q9ULI1 1742 aa17.1■□□□□ 0.33
RTCB-202ENST00000463455 HAP1P54257 671 aaPredicted RBP17.1■□□□□ 0.33
RTCB-202ENST00000463455 UNC5CLQ8IV45 518 aa17.1■□□□□ 0.33
RTCB-202ENST00000463455 NGDNQ8NEJ9 315 aaKnown RBP17.1■□□□□ 0.33
RTCB-202ENST00000463455 CDK19Q9BWU1 502 aa17.1■□□□□ 0.33
RTCB-202ENST00000463455 CCDC61Q9Y6R9 512 aa17.1■□□□□ 0.33
RTCB-202ENST00000463455 POLR3AO14802 1390 aaPredicted RBP17.1■□□□□ 0.33
RTCB-202ENST00000463455 UPF1Q92900 1129 aaKnown RBP eCLIP17.09■□□□□ 0.33
RTCB-202ENST00000463455 SIN3AQ96ST3 1273 aa17.08■□□□□ 0.32
RTCB-202ENST00000463455 PLEKHG3A1L390 1219 aa17.07■□□□□ 0.32
RTCB-202ENST00000463455 TRIM26Q12899 539 aaPredicted RBP17.07■□□□□ 0.32
RTCB-202ENST00000463455 LMOD2Q6P5Q4 547 aa17.07■□□□□ 0.32
RTCB-202ENST00000463455 GJD4Q96KN9 370 aaPredicted RBP17.07■□□□□ 0.32
RTCB-202ENST00000463455 ATF5Q9Y2D1 282 aaPredicted RBP17.07■□□□□ 0.32
RTCB-202ENST00000463455 BRD4O60885 1362 aaPredicted RBP17.06■□□□□ 0.32
RTCB-202ENST00000463455 PLCH1Q4KWH8 1693 aa17.06■□□□□ 0.32
RTCB-202ENST00000463455 QRICH2Q9H0J4 1663 aa17.06■□□□□ 0.32
RTCB-202ENST00000463455 ROCK2O75116 1388 aaKnown RBP17.05■□□□□ 0.32
RTCB-202ENST00000463455 ATAD2Q6PL18 1390 aa17.05■□□□□ 0.32
RTCB-202ENST00000463455 NEUROD1Q13562 356 aa17.05■□□□□ 0.32
RTCB-202ENST00000463455 CRYBG1Q9Y4K1 1723 aa17.04■□□□□ 0.32
RTCB-202ENST00000463455 CABLES1Q8TDN4 633 aa17.04■□□□□ 0.32
RTCB-202ENST00000463455 RALGAPBQ86X10 1494 aa17.04■□□□□ 0.32
RTCB-202ENST00000463455 COL14A1Q05707 1796 aaKnown RBP17.03■□□□□ 0.32
RTCB-202ENST00000463455 VPS72Q15906 364 aa17.03■□□□□ 0.32
RTCB-202ENST00000463455 SAMD1Q6SPF0 538 aaPredicted RBP17.03■□□□□ 0.32
RTCB-202ENST00000463455 GLI3P10071 1580 aa17.02■□□□□ 0.32
RTCB-202ENST00000463455 ACEP12821 1306 aa17.02■□□□□ 0.32
RTCB-202ENST00000463455 SRPK2P78362 688 aaKnown RBP17.02■□□□□ 0.32
RTCB-202ENST00000463455 NBPF8Q3BBV2 869 aa17.02■□□□□ 0.32
RTCB-202ENST00000463455 PAK3O75914 559 aaPredicted RBP17.01■□□□□ 0.31
RTCB-202ENST00000463455 PPIP5K1Q6PFW1 1433 aa17.01■□□□□ 0.31
RTCB-202ENST00000463455 SBNO2Q9Y2G9 1366 aa17.01■□□□□ 0.31
RTCB-202ENST00000463455 EVC2Q86UK5 1308 aa17■□□□□ 0.31
RTCB-202ENST00000463455 FAM83GA6ND36 823 aa17■□□□□ 0.31
RTCB-202ENST00000463455 TONSLQ96HA7 1378 aa17■□□□□ 0.31
RTCB-202ENST00000463455 NRAPQ86VF7 1730 aa16.99■□□□□ 0.31
RTCB-202ENST00000463455 ONECUT3O60422 494 aaPredicted RBP16.98■□□□□ 0.31
RTCB-202ENST00000463455 PHRF1Q9P1Y6 1649 aaKnown RBP16.98■□□□□ 0.31
RTCB-202ENST00000463455 CCDC125Q86Z20 511 aa16.97■□□□□ 0.31
RTCB-202ENST00000463455 RNF39Q9H2S5 420 aa16.97■□□□□ 0.31
RTCB-202ENST00000463455 CABP2Q9NPB3 220 aa16.96■□□□□ 0.31
RTCB-202ENST00000463455 PRDM11Q9NQV5 511 aa16.96■□□□□ 0.31
RTCB-202ENST00000463455 USP19O94966 1318 aa16.96■□□□□ 0.3
RTCB-202ENST00000463455 BTG4Q9NY30 223 aa16.95■□□□□ 0.3
RTCB-202ENST00000463455 USP6P35125 1406 aa16.95■□□□□ 0.3
RTCB-202ENST00000463455 CPDO75976 1380 aa16.94■□□□□ 0.3
RTCB-202ENST00000463455 PLEKHG5O94827 1062 aa16.94■□□□□ 0.3
RTCB-202ENST00000463455 ABTB2Q8N961 1025 aa16.94■□□□□ 0.3
RTCB-202ENST00000463455 NRKQ7Z2Y5 1582 aa16.94■□□□□ 0.3
RTCB-202ENST00000463455 KIAA0232Q92628 1395 aa16.93■□□□□ 0.3
RTCB-202ENST00000463455 NLRP13Q86W25 1043 aa16.93■□□□□ 0.3
RTCB-202ENST00000463455 CABP1Q9NZU7 370 aa16.93■□□□□ 0.3
RTCB-202ENST00000463455 SEPT12Q8IYM1 358 aa16.92■□□□□ 0.3
RTCB-202ENST00000463455 ZNF692Q9BU19 519 aaPredicted RBP16.92■□□□□ 0.3
RTCB-202ENST00000463455 CARD11Q9BXL7 1154 aa16.92■□□□□ 0.3
RTCB-202ENST00000463455 CCDC9Q9Y3X0 531 aaKnown RBP16.92■□□□□ 0.3
RTCB-202ENST00000463455 SSH2Q76I76 1423 aa16.91■□□□□ 0.3
RTCB-202ENST00000463455 SPATA31A5Q5VU36 1347 aa16.91■□□□□ 0.3
RTCB-202ENST00000463455 SPATA31A7Q8IWB4 1347 aa16.91■□□□□ 0.3
RTCB-202ENST00000463455 BRWD3Q6RI45 1802 aa16.89■□□□□ 0.29
RTCB-202ENST00000463455 SLC24A1O60721 1099 aa16.89■□□□□ 0.29
RTCB-202ENST00000463455 PUS7Q96PZ0 661 aaKnown RBP16.89■□□□□ 0.29
RTCB-202ENST00000463455 BLMP54132 1417 aaPredicted RBP16.88■□□□□ 0.29
RTCB-202ENST00000463455 CPSF1Q10570 1443 aaKnown RBP16.88■□□□□ 0.29
RTCB-202ENST00000463455 EP400Q96L91 3159 aa16.88■□□□□ 0.29
RTCB-202ENST00000463455 AKAP12Q02952 1782 aa16.88■□□□□ 0.29
RTCB-202ENST00000463455 SLIT3O75094 1523 aa16.88■□□□□ 0.29
RTCB-202ENST00000463455 LMO7Q8WWI1 1683 aa16.88■□□□□ 0.29
RTCB-202ENST00000463455 GCP02774 474 aa16.87■□□□□ 0.29
RTCB-202ENST00000463455 ZC3H6P61129 1189 aaKnown RBP16.87■□□□□ 0.29
RTCB-202ENST00000463455 NUTM2GQ5VZR2 741 aa16.87■□□□□ 0.29
RTCB-202ENST00000463455 KRT27Q7Z3Y8 459 aa16.87■□□□□ 0.29
RTCB-202ENST00000463455 TTC21AQ8NDW8 1320 aa16.87■□□□□ 0.29
RTCB-202ENST00000463455 CLSPNQ9HAW4 1339 aa16.87■□□□□ 0.29
RTCB-202ENST00000463455 THSD7AQ9UPZ6 1657 aa16.87■□□□□ 0.29
RTCB-202ENST00000463455 SPATA31A1Q5TZJ5 1347 aa16.86■□□□□ 0.29
RTCB-202ENST00000463455 PIK3C2AO00443 1686 aa16.85■□□□□ 0.29
RTCB-202ENST00000463455 NLRP6P59044 892 aa16.85■□□□□ 0.29
RTCB-202ENST00000463455 CHRNA2Q15822 529 aa16.85■□□□□ 0.29
RTCB-202ENST00000463455 FAM98CQ17RN3 349 aaKnown RBP16.85■□□□□ 0.29
RTCB-202ENST00000463455 CAMTA1Q9Y6Y1 1673 aa16.84■□□□□ 0.29
RTCB-202ENST00000463455 AATKQ6ZMQ8 1374 aa16.83■□□□□ 0.28
RTCB-202ENST00000463455 BARGINQ6ZT62 677 aa16.83■□□□□ 0.28
RTCB-202ENST00000463455 MON2Q7Z3U7 1717 aa16.83■□□□□ 0.28
RTCB-202ENST00000463455 TTC21BQ7Z4L5 1316 aa16.83■□□□□ 0.28
RTCB-202ENST00000463455 TIMELESSQ9UNS1 1208 aa16.83■□□□□ 0.28
RTCB-202ENST00000463455 KTN1Q86UP2 1357 aaKnown RBP16.82■□□□□ 0.28
RTCB-202ENST00000463455 NINLQ9Y2I6 1382 aa16.82■□□□□ 0.28
RTCB-202ENST00000463455 A0A0G2JS52 829 aa16.82■□□□□ 0.28
RTCB-202ENST00000463455 MYT1Q01538 1121 aa16.82■□□□□ 0.28
RTCB-202ENST00000463455 KCNH5Q8NCM2 988 aa16.82■□□□□ 0.28
RTCB-202ENST00000463455 THRAP3Q9Y2W1 955 aaKnown RBP16.82■□□□□ 0.28
RTCB-202ENST00000463455 EVA1CP58658 441 aa16.81■□□□□ 0.28
RTCB-202ENST00000463455 SF3B2Q13435 895 aaKnown RBP16.81■□□□□ 0.28
RTCB-202ENST00000463455 STRN4Q9NRL3 753 aa16.81■□□□□ 0.28
RTCB-202ENST00000463455 USP54Q70EL1 1684 aa16.81■□□□□ 0.28
RTCB-202ENST00000463455 ABCC6O95255 1503 aa16.8■□□□□ 0.28
RTCB-202ENST00000463455 COL5A2P05997 1499 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms