RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 U2AF1L5P0DN76 240 aaPredicted RBP13.36□□□□□ -0.27
MSH5-211ENST00000463144 FBLN1P23142 703 aa13.36□□□□□ -0.27
MSH5-211ENST00000463144 U2AF1Q01081 240 aaKnown RBP eCLIP13.36□□□□□ -0.272e-10■■■□□ 16.7
MSH5-211ENST00000463144 NEUROD2Q15784 382 aa13.36□□□□□ -0.27
MSH5-211ENST00000463144 THEMISQ8N1K5 641 aaPredicted RBP13.36□□□□□ -0.27
MSH5-211ENST00000463144 MON2Q7Z3U7 1717 aa13.36□□□□□ -0.27
MSH5-211ENST00000463144 EDC4Q6P2E9 1401 aaKnown RBP13.35□□□□□ -0.27
MSH5-211ENST00000463144 PNPLA6Q8IY17 1366 aa13.35□□□□□ -0.27
MSH5-211ENST00000463144 TBX22Q9Y458 520 aa13.35□□□□□ -0.27
MSH5-211ENST00000463144 NKTRP30414 1462 aaKnown RBP13.34□□□□□ -0.27
MSH5-211ENST00000463144 RIMS1Q86UR5 1692 aaKnown RBP13.34□□□□□ -0.27
MSH5-211ENST00000463144 C20orf194Q5TEA3 1177 aa13.34□□□□□ -0.27
MSH5-211ENST00000463144 ZRANB1Q9UGI0 708 aa13.34□□□□□ -0.27
MSH5-211ENST00000463144 MAP2P11137 1827 aaKnown RBP13.34□□□□□ -0.27
MSH5-211ENST00000463144 NME9Q86XW9 330 aa13.33□□□□□ -0.28
MSH5-211ENST00000463144 PLEKHF1Q96S99 279 aa13.33□□□□□ -0.28
MSH5-211ENST00000463144 AMOTL2Q9Y2J4 779 aa13.33□□□□□ -0.28
MSH5-211ENST00000463144 RBM19Q9Y4C8 960 aaKnown RBP13.33□□□□□ -0.28
MSH5-211ENST00000463144 ITSN1Q15811 1721 aa13.33□□□□□ -0.28
MSH5-211ENST00000463144 POLKQ9UBT6 870 aa13.33□□□□□ -0.28
MSH5-211ENST00000463144 CRBNQ96SW2 442 aa13.32□□□□□ -0.28
MSH5-211ENST00000463144 TOPAZ1Q8N9V7 1692 aa13.32□□□□□ -0.28
MSH5-211ENST00000463144 U2SURPO15042 1029 aaKnown RBP13.32□□□□□ -0.28
MSH5-211ENST00000463144 CCDC27Q2M243 656 aa13.32□□□□□ -0.28
MSH5-211ENST00000463144 CEP170BQ9Y4F5 1589 aaPredicted RBP13.32□□□□□ -0.28
MSH5-211ENST00000463144 DIAPH1O60610 1272 aaKnown RBP13.3□□□□□ -0.28
MSH5-211ENST00000463144 NCBP3Q53F19 620 aaKnown RBP13.3□□□□□ -0.28
MSH5-211ENST00000463144 DIP2AQ14689 1571 aa13.3□□□□□ -0.28
MSH5-211ENST00000463144 WDR63Q8IWG1 891 aa13.3□□□□□ -0.28
MSH5-211ENST00000463144 ZNF692Q9BU19 519 aaPredicted RBP13.3□□□□□ -0.28
MSH5-211ENST00000463144 NUTM2FA1L443 756 aa13.29□□□□□ -0.28
MSH5-211ENST00000463144 XRN1Q8IZH2 1706 aaKnown RBP13.29□□□□□ -0.28
MSH5-211ENST00000463144 PTCH1Q13635 1447 aa13.29□□□□□ -0.28
MSH5-211ENST00000463144 PLEKHG3A1L390 1219 aa13.29□□□□□ -0.28
MSH5-211ENST00000463144 BCAR3O75815 825 aa13.29□□□□□ -0.28
MSH5-211ENST00000463144 NRKQ7Z2Y5 1582 aa13.28□□□□□ -0.28
MSH5-211ENST00000463144 ACEP12821 1306 aa13.28□□□□□ -0.28
MSH5-211ENST00000463144 EMILIN1Q9Y6C2 1016 aa13.28□□□□□ -0.28
MSH5-211ENST00000463144 PPM1GO15355 546 aaPredicted RBP13.28□□□□□ -0.28
MSH5-211ENST00000463144 TMPOP42166 694 aaKnown RBP13.27□□□□□ -0.28
MSH5-211ENST00000463144 AATKQ6ZMQ8 1374 aa13.27□□□□□ -0.29
MSH5-211ENST00000463144 TRIM35Q9UPQ4 493 aa13.27□□□□□ -0.29
MSH5-211ENST00000463144 RGPD8O14715 1765 aaPredicted RBP13.26□□□□□ -0.29
MSH5-211ENST00000463144 TTC21BQ7Z4L5 1316 aa13.26□□□□□ -0.29
MSH5-211ENST00000463144 COG3Q96JB2 828 aa13.26□□□□□ -0.29
MSH5-211ENST00000463144 KDM4FA0A1W2PPD8 638 aa13.25□□□□□ -0.29
MSH5-211ENST00000463144 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.25□□□□□ -0.29
MSH5-211ENST00000463144 LRRC7Q96NW7 1537 aa13.25□□□□□ -0.29
MSH5-211ENST00000463144 ZNF142P52746 1687 aaPredicted RBP13.25□□□□□ -0.29
MSH5-211ENST00000463144 CDK12Q9NYV4 1490 aaPredicted RBP13.24□□□□□ -0.29
MSH5-211ENST00000463144 KCNA6P17658 529 aa13.24□□□□□ -0.29
MSH5-211ENST00000463144 USP6P35125 1406 aa13.24□□□□□ -0.29
MSH5-211ENST00000463144 RRS1Q15050 365 aaKnown RBP13.24□□□□□ -0.29
MSH5-211ENST00000463144 RSPH6AQ9H0K4 717 aa13.24□□□□□ -0.29
MSH5-211ENST00000463144 SSH2Q76I76 1423 aa13.24□□□□□ -0.29
MSH5-211ENST00000463144 FCHSD2O94868 740 aa13.24□□□□□ -0.29
MSH5-211ENST00000463144 IL13P35225 146 aa13.24□□□□□ -0.29
MSH5-211ENST00000463144 MAPK8IP3Q9UPT6 1336 aa13.23□□□□□ -0.29
MSH5-211ENST00000463144 PIK3R4Q99570 1358 aa13.23□□□□□ -0.29
MSH5-211ENST00000463144 OVOS2A0A0J9YW53 1432 aa13.22□□□□□ -0.29
MSH5-211ENST00000463144 OVOS2Q6IE36 1432 aa13.22□□□□□ -0.29
MSH5-211ENST00000463144 PRKAR2BP31323 418 aa13.22□□□□□ -0.29
MSH5-211ENST00000463144 RARSP54136 660 aaKnown RBP13.22□□□□□ -0.29
MSH5-211ENST00000463144 RIPK4P57078 832 aa13.22□□□□□ -0.29
MSH5-211ENST00000463144 PMFBP1Q8TBY8 1022 aa13.22□□□□□ -0.29
MSH5-211ENST00000463144 CHD2O14647 1828 aaKnown RBP13.22□□□□□ -0.29
MSH5-211ENST00000463144 ANKLE2Q86XL3 938 aa13.22□□□□□ -0.29
MSH5-211ENST00000463144 PNNQ9H307 717 aaKnown RBP13.22□□□□□ -0.29
MSH5-211ENST00000463144 NALCNQ8IZF0 1738 aa13.21□□□□□ -0.29
MSH5-211ENST00000463144 HMOX1P09601 288 aa13.21□□□□□ -0.29
MSH5-211ENST00000463144 PHACTR3Q96KR7 559 aa13.21□□□□□ -0.29
MSH5-211ENST00000463144 MYH16Q9H6N6 1097 aa13.21□□□□□ -0.29
MSH5-211ENST00000463144 SETD1BQ9UPS6 1966 aaKnown RBP13.21□□□□□ -0.3
MSH5-211ENST00000463144 TSR2Q969E8 191 aaKnown RBP13.2□□□□□ -0.3
MSH5-211ENST00000463144 FANCIQ9NVI1 1328 aa13.2□□□□□ -0.3
MSH5-211ENST00000463144 FMN2Q9NZ56 1722 aa13.19□□□□□ -0.3
MSH5-211ENST00000463144 IL16Q14005 1332 aa13.19□□□□□ -0.3
MSH5-211ENST00000463144 PEAK1Q9H792 1746 aa13.19□□□□□ -0.3
MSH5-211ENST00000463144 USP31Q70CQ4 1352 aa13.18□□□□□ -0.3
MSH5-211ENST00000463144 PDE3AQ14432 1141 aa13.18□□□□□ -0.3
MSH5-211ENST00000463144 KDM2BQ8NHM5 1336 aa13.18□□□□□ -0.3
MSH5-211ENST00000463144 EXOSC9Q06265 439 aaKnown RBP13.17□□□□□ -0.3
MSH5-211ENST00000463144 NGDNQ8NEJ9 315 aaKnown RBP13.17□□□□□ -0.3
MSH5-211ENST00000463144 ANKARQ7Z5J8 1434 aa13.17□□□□□ -0.3
MSH5-211ENST00000463144 NFE2L2Q16236 605 aa13.16□□□□□ -0.3
MSH5-211ENST00000463144 PANK1Q8TE04 598 aa13.16□□□□□ -0.3
MSH5-211ENST00000463144 BCL2L13Q9BXK5 485 aa13.16□□□□□ -0.3
MSH5-211ENST00000463144 TNNQ9UQP3 1299 aa13.16□□□□□ -0.3
MSH5-211ENST00000463144 TTC21AQ8NDW8 1320 aa13.16□□□□□ -0.3
MSH5-211ENST00000463144 EIF4A2Q14240 407 aaKnown RBP13.16□□□□□ -0.3
MSH5-211ENST00000463144 SKAP1Q86WV1 359 aa13.16□□□□□ -0.3
MSH5-211ENST00000463144 FRAT1Q92837 279 aaPredicted RBP13.16□□□□□ -0.3
MSH5-211ENST00000463144 PIK3C2AO00443 1686 aa13.16□□□□□ -0.3
MSH5-211ENST00000463144 RBM33Q96EV2 1170 aaKnown RBP13.15□□□□□ -0.3
MSH5-211ENST00000463144 DLG5Q8TDM6 1919 aa13.15□□□□□ -0.3
MSH5-211ENST00000463144 HSP90AB2PQ58FF8 381 aa13.14□□□□□ -0.31
MSH5-211ENST00000463144 CT47B1P0C2W7 299 aaPredicted RBP13.14□□□□□ -0.31
MSH5-211ENST00000463144 RLBP1P12271 317 aa13.14□□□□□ -0.31
MSH5-211ENST00000463144 CANXP27824 592 aaKnown RBP13.14□□□□□ -0.31
MSH5-211ENST00000463144 COG6Q9Y2V7 657 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms