RNA–Protein interactions for RNA: ENST00000463143.5

DUBR-201, DPPA2 upstream binding RNA, humanhuman

TSL 3

Gene DUBR, Length 801 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-201ENST00000463143 PAK3O75914 559 aaPredicted RBP12.36□□□□□ -0.43
DUBR-201ENST00000463143 PPP2R1AP30153 589 aa12.36□□□□□ -0.43
DUBR-201ENST00000463143 C1orf167Q5SNV9 1468 aa12.35□□□□□ -0.43
DUBR-201ENST00000463143 FOXO3O43524 673 aa12.35□□□□□ -0.43
DUBR-201ENST00000463143 CCDC184Q52MB2 194 aa12.35□□□□□ -0.43
DUBR-201ENST00000463143 NME9Q86XW9 330 aa12.35□□□□□ -0.43
DUBR-201ENST00000463143 COG3Q96JB2 828 aa12.35□□□□□ -0.43
DUBR-201ENST00000463143 SLAIN2Q9P270 581 aa12.35□□□□□ -0.43
DUBR-201ENST00000463143 NALCNQ8IZF0 1738 aa12.34□□□□□ -0.43
DUBR-201ENST00000463143 STRCP1A6NGW2 1772 aa12.34□□□□□ -0.43
DUBR-201ENST00000463143 TTC21AQ8NDW8 1320 aa12.34□□□□□ -0.43
DUBR-201ENST00000463143 BRD4O60885 1362 aaPredicted RBP12.33□□□□□ -0.44
DUBR-201ENST00000463143 KRT28Q7Z3Y7 464 aa12.33□□□□□ -0.44
DUBR-201ENST00000463143 USP6P35125 1406 aa12.33□□□□□ -0.44
DUBR-201ENST00000463143 FMN2Q9NZ56 1722 aa12.33□□□□□ -0.44
DUBR-201ENST00000463143 USP32Q8NFA0 1604 aa12.33□□□□□ -0.44
DUBR-201ENST00000463143 MST1RQ04912 1400 aa12.32□□□□□ -0.44
DUBR-201ENST00000463143 ABTB2Q8N961 1025 aa12.32□□□□□ -0.44
DUBR-201ENST00000463143 YTHDC1Q96MU7 727 aaKnown RBP12.32□□□□□ -0.44
DUBR-201ENST00000463143 ZRANB1Q9UGI0 708 aa12.32□□□□□ -0.44
DUBR-201ENST00000463143 NLRP6P59044 892 aa12.31□□□□□ -0.44
DUBR-201ENST00000463143 FAM9BQ8IZU0 186 aa12.31□□□□□ -0.44
DUBR-201ENST00000463143 XPCQ01831 940 aaPredicted RBP12.3□□□□□ -0.44
DUBR-201ENST00000463143 RNF216Q9NWF9 866 aaPredicted RBP12.3□□□□□ -0.44
DUBR-201ENST00000463143 SSH2Q76I76 1423 aa12.29□□□□□ -0.44
DUBR-201ENST00000463143 TOPAZ1Q8N9V7 1692 aa12.29□□□□□ -0.44
DUBR-201ENST00000463143 MTHFSP49914 203 aa12.29□□□□□ -0.44
DUBR-201ENST00000463143 LMOD2Q6P5Q4 547 aa12.29□□□□□ -0.44
DUBR-201ENST00000463143 BRINP3Q76B58 766 aa12.29□□□□□ -0.44
DUBR-201ENST00000463143 PNISRQ8TF01 805 aaKnown RBP12.29□□□□□ -0.44
DUBR-201ENST00000463143 CFAP53Q96M91 514 aa12.29□□□□□ -0.44
DUBR-201ENST00000463143 NPHP3Q7Z494 1330 aa12.29□□□□□ -0.44
DUBR-201ENST00000463143 ITSN1Q15811 1721 aa12.28□□□□□ -0.44
DUBR-201ENST00000463143 NUTM2GQ5VZR2 741 aa12.28□□□□□ -0.44
DUBR-201ENST00000463143 PPM1GO15355 546 aaPredicted RBP12.27□□□□□ -0.45
DUBR-201ENST00000463143 DDX17Q92841 729 aaKnown RBP12.27□□□□□ -0.45
DUBR-201ENST00000463143 LTBP4Q8N2S1 1624 aa12.26□□□□□ -0.45
DUBR-201ENST00000463143 SOX12O15370 315 aa12.26□□□□□ -0.45
DUBR-201ENST00000463143 FBLN1P23142 703 aa12.26□□□□□ -0.45
DUBR-201ENST00000463143 WDR43Q15061 677 aaKnown RBP eCLIP12.26□□□□□ -0.45
DUBR-201ENST00000463143 USP31Q70CQ4 1352 aa12.26□□□□□ -0.45
DUBR-201ENST00000463143 TOM1O60784 492 aa12.25□□□□□ -0.45
DUBR-201ENST00000463143 POLKQ9UBT6 870 aa12.25□□□□□ -0.45
DUBR-201ENST00000463143 RGPD8O14715 1765 aaPredicted RBP12.24□□□□□ -0.45
DUBR-201ENST00000463143 CACNB1Q02641 598 aaPredicted RBP12.24□□□□□ -0.45
DUBR-201ENST00000463143 AKAP12Q02952 1782 aa12.24□□□□□ -0.45
DUBR-201ENST00000463143 MON2Q7Z3U7 1717 aa12.23□□□□□ -0.45
DUBR-201ENST00000463143 AATKQ6ZMQ8 1374 aa12.23□□□□□ -0.45
DUBR-201ENST00000463143 PLEKHG5O94827 1062 aa12.23□□□□□ -0.45
DUBR-201ENST00000463143 RRS1Q15050 365 aaKnown RBP12.23□□□□□ -0.45
DUBR-201ENST00000463143 KCNH5Q8NCM2 988 aa12.23□□□□□ -0.45
DUBR-201ENST00000463143 NUDCQ9Y266 331 aa12.23□□□□□ -0.45
DUBR-201ENST00000463143 OVOS2A0A0J9YW53 1432 aa12.22□□□□□ -0.45
DUBR-201ENST00000463143 OVOS2Q6IE36 1432 aa12.22□□□□□ -0.45
DUBR-201ENST00000463143 SBNO1A3KN83 1393 aa12.22□□□□□ -0.45
DUBR-201ENST00000463143 UBAP1LF5GYI3 381 aa12.22□□□□□ -0.45
DUBR-201ENST00000463143 DIAPH1O60610 1272 aaKnown RBP12.22□□□□□ -0.45
DUBR-201ENST00000463143 ADAMTS8Q9UP79 889 aa12.22□□□□□ -0.45
DUBR-201ENST00000463143 EMILIN1Q9Y6C2 1016 aa12.22□□□□□ -0.45
DUBR-201ENST00000463143 XIRP1Q702N8 1843 aaKnown RBP12.22□□□□□ -0.45
DUBR-201ENST00000463143 KIF1AQ12756 1690 aa12.22□□□□□ -0.45
DUBR-201ENST00000463143 SPATA31A3Q5VYP0 1347 aa12.21□□□□□ -0.45
DUBR-201ENST00000463143 AMPHP49418 695 aa12.21□□□□□ -0.45
DUBR-201ENST00000463143 PIP4K2BP78356 416 aa12.21□□□□□ -0.45
DUBR-201ENST00000463143 CERKQ8TCT0 537 aa12.21□□□□□ -0.45
DUBR-201ENST00000463143 SOS2Q07890 1332 aaPredicted RBP12.2□□□□□ -0.46
DUBR-201ENST00000463143 GCP02774 474 aa12.2□□□□□ -0.46
DUBR-201ENST00000463143 HNRNPUQ00839 825 aaKnown RBP eCLIP12.2□□□□□ -0.46
DUBR-201ENST00000463143 NRKQ7Z2Y5 1582 aa12.2□□□□□ -0.46
DUBR-201ENST00000463143 ZBTB7CA1YPR0 619 aa12.19□□□□□ -0.46
DUBR-201ENST00000463143 U2SURPO15042 1029 aaKnown RBP12.19□□□□□ -0.46
DUBR-201ENST00000463143 ARHGEF10O15013 1369 aa12.18□□□□□ -0.46
DUBR-201ENST00000463143 KIF20BQ96Q89 1820 aa12.18□□□□□ -0.46
DUBR-201ENST00000463143 MAP3K19Q56UN5 1328 aa12.18□□□□□ -0.46
DUBR-201ENST00000463143 U2AF1L5P0DN76 240 aaPredicted RBP12.18□□□□□ -0.46
DUBR-201ENST00000463143 U2AF1Q01081 240 aaKnown RBP eCLIP12.18□□□□□ -0.46
DUBR-201ENST00000463143 LRRC59Q96AG4 307 aaKnown RBP12.18□□□□□ -0.46
DUBR-201ENST00000463143 TNS3Q68CZ2 1445 aa12.18□□□□□ -0.46
DUBR-201ENST00000463143 INSRP06213 1382 aa12.18□□□□□ -0.46
DUBR-201ENST00000463143 PNPLA6Q8IY17 1366 aa12.18□□□□□ -0.46
DUBR-201ENST00000463143 PXDNQ92626 1479 aa12.17□□□□□ -0.46
DUBR-201ENST00000463143 HOXD11P31277 338 aaPredicted RBP12.17□□□□□ -0.46
DUBR-201ENST00000463143 HAP1P54257 671 aaPredicted RBP12.17□□□□□ -0.46
DUBR-201ENST00000463143 HSP90AB2PQ58FF8 381 aa12.17□□□□□ -0.46
DUBR-201ENST00000463143 USP19O94966 1318 aa12.16□□□□□ -0.46
DUBR-201ENST00000463143 CENPBP07199 599 aaPredicted RBP12.16□□□□□ -0.46
DUBR-201ENST00000463143 CABLES1Q8TDN4 633 aa12.16□□□□□ -0.46
DUBR-201ENST00000463143 PNNQ9H307 717 aaKnown RBP12.16□□□□□ -0.46
DUBR-201ENST00000463143 PIK3C2AO00443 1686 aa12.16□□□□□ -0.46
DUBR-201ENST00000463143 ANKRD26Q9UPS8 1709 aa12.15□□□□□ -0.46
DUBR-201ENST00000463143 HOXC9P31274 260 aa12.15□□□□□ -0.46
DUBR-201ENST00000463143 IL13P35225 146 aa12.15□□□□□ -0.46
DUBR-201ENST00000463143 ZC3H6P61129 1189 aaKnown RBP12.15□□□□□ -0.46
DUBR-201ENST00000463143 ARHGEF25Q86VW2 580 aa12.15□□□□□ -0.46
DUBR-201ENST00000463143 IP6K1Q92551 441 aa12.15□□□□□ -0.46
DUBR-201ENST00000463143 SMG6Q86US8 1419 aaKnown RBP12.14□□□□□ -0.47
DUBR-201ENST00000463143 EIF4A2Q14240 407 aaKnown RBP12.14□□□□□ -0.47
DUBR-201ENST00000463143 CCDC146Q8IYE0 955 aa12.14□□□□□ -0.47
DUBR-201ENST00000463143 FLT4P35916 1363 aa12.14□□□□□ -0.47
DUBR-201ENST00000463143 KIF24Q5T7B8 1368 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms