RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 USP6P35125 1406 aa24.49■■□□□ 1.51
ATPAF2-202ENST00000462733 CNGB1Q14028 1251 aaPredicted RBP24.49■■□□□ 1.51
ATPAF2-202ENST00000462733 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.48■■□□□ 1.51
ATPAF2-202ENST00000462733 NPHP3Q7Z494 1330 aa24.46■■□□□ 1.51
ATPAF2-202ENST00000462733 KRT28Q7Z3Y7 464 aa24.46■■□□□ 1.51
ATPAF2-202ENST00000462733 EDC4Q6P2E9 1401 aaKnown RBP24.46■■□□□ 1.51
ATPAF2-202ENST00000462733 PAK3O75914 559 aaPredicted RBP24.44■■□□□ 1.5
ATPAF2-202ENST00000462733 MYT1Q01538 1121 aa24.44■■□□□ 1.5
ATPAF2-202ENST00000462733 TTC21BQ7Z4L5 1316 aa24.43■■□□□ 1.5
ATPAF2-202ENST00000462733 NRKQ7Z2Y5 1582 aa24.43■■□□□ 1.5
ATPAF2-202ENST00000462733 CGNL1Q0VF96 1302 aa24.42■■□□□ 1.5
ATPAF2-202ENST00000462733 SSH2Q76I76 1423 aa24.42■■□□□ 1.5
ATPAF2-202ENST00000462733 CC2D1BQ5T0F9 858 aaKnown RBP24.41■■□□□ 1.5
ATPAF2-202ENST00000462733 NHSL1Q5SYE7 1610 aa24.41■■□□□ 1.5
ATPAF2-202ENST00000462733 AMER1Q5JTC6 1135 aaPredicted RBP24.41■■□□□ 1.5
ATPAF2-202ENST00000462733 NME9Q86XW9 330 aa24.4■■□□□ 1.5
ATPAF2-202ENST00000462733 PXDNQ92626 1479 aa24.39■■□□□ 1.5
ATPAF2-202ENST00000462733 GGNBP2Q9H3C7 697 aa24.38■■□□□ 1.49
ATPAF2-202ENST00000462733 KIF20BQ96Q89 1820 aa24.38■■□□□ 1.49
ATPAF2-202ENST00000462733 TRPM3Q9HCF6 1732 aaPredicted RBP24.38■■□□□ 1.49
ATPAF2-202ENST00000462733 FYB1O15117 783 aa24.38■■□□□ 1.49
ATPAF2-202ENST00000462733 TTC21AQ8NDW8 1320 aa24.37■■□□□ 1.49
ATPAF2-202ENST00000462733 BRD4O60885 1362 aaPredicted RBP24.37■■□□□ 1.49
ATPAF2-202ENST00000462733 LMOD2Q6P5Q4 547 aa24.37■■□□□ 1.49
ATPAF2-202ENST00000462733 ZRANB1Q9UGI0 708 aa24.37■■□□□ 1.49
ATPAF2-202ENST00000462733 SOS2Q07890 1332 aaPredicted RBP24.37■■□□□ 1.49
ATPAF2-202ENST00000462733 ABTB2Q8N961 1025 aa24.36■■□□□ 1.49
ATPAF2-202ENST00000462733 NUTM2GQ5VZR2 741 aa24.35■■□□□ 1.49
ATPAF2-202ENST00000462733 AHDC1Q5TGY3 1603 aaPredicted RBP24.35■■□□□ 1.49
ATPAF2-202ENST00000462733 NEFLP07196 543 aa24.34■■□□□ 1.49
ATPAF2-202ENST00000462733 PIK3C2AO00443 1686 aa24.34■■□□□ 1.49
ATPAF2-202ENST00000462733 SBNO1A3KN83 1393 aa24.34■■□□□ 1.49
ATPAF2-202ENST00000462733 PHLPP1O60346 1717 aa24.33■■□□□ 1.49
ATPAF2-202ENST00000462733 NPC1L1Q9UHC9 1359 aa24.32■■□□□ 1.48
ATPAF2-202ENST00000462733 PLEKHG5O94827 1062 aa24.32■■□□□ 1.48
ATPAF2-202ENST00000462733 NLRP6P59044 892 aa24.32■■□□□ 1.48
ATPAF2-202ENST00000462733 NSD2O96028 1365 aa24.32■■□□□ 1.48
ATPAF2-202ENST00000462733 TNS3Q68CZ2 1445 aa24.31■■□□□ 1.48
ATPAF2-202ENST00000462733 SPATA31A3Q5VYP0 1347 aa24.31■■□□□ 1.48
ATPAF2-202ENST00000462733 ALS2Q96Q42 1657 aa24.31■■□□□ 1.48
ATPAF2-202ENST00000462733 MORC1Q86VD1 984 aa24.3■■□□□ 1.48
ATPAF2-202ENST00000462733 COG3Q96JB2 828 aa24.3■■□□□ 1.48
ATPAF2-202ENST00000462733 ANKRD26Q9UPS8 1709 aa24.29■■□□□ 1.48
ATPAF2-202ENST00000462733 TNNT2P45379 298 aaPredicted RBP24.28■■□□□ 1.48
ATPAF2-202ENST00000462733 PRKRIP1Q9H875 184 aaPredicted RBP24.28■■□□□ 1.48
ATPAF2-202ENST00000462733 LRRC59Q96AG4 307 aaKnown RBP24.27■■□□□ 1.48
ATPAF2-202ENST00000462733 COL16A1Q07092 1604 aaPredicted RBP24.26■■□□□ 1.47
ATPAF2-202ENST00000462733 OVOS2A0A0J9YW53 1432 aa24.26■■□□□ 1.47
ATPAF2-202ENST00000462733 OVOS2Q6IE36 1432 aa24.26■■□□□ 1.47
ATPAF2-202ENST00000462733 USP31Q70CQ4 1352 aa24.26■■□□□ 1.47
ATPAF2-202ENST00000462733 NLRP13Q86W25 1043 aa24.26■■□□□ 1.47
ATPAF2-202ENST00000462733 ARHGEF10O15013 1369 aa24.26■■□□□ 1.47
ATPAF2-202ENST00000462733 SOX12O15370 315 aa24.25■■□□□ 1.47
ATPAF2-202ENST00000462733 PARD3Q8TEW0 1356 aa24.25■■□□□ 1.47
ATPAF2-202ENST00000462733 MARF1Q9Y4F3 1742 aaKnown RBP24.25■■□□□ 1.47
ATPAF2-202ENST00000462733 FKBP8Q14318 412 aa24.24■■□□□ 1.47
ATPAF2-202ENST00000462733 RALBP1Q15311 655 aa24.24■■□□□ 1.47
ATPAF2-202ENST00000462733 FBLN1P23142 703 aa24.22■■□□□ 1.47
ATPAF2-202ENST00000462733 USP54Q70EL1 1684 aa24.22■■□□□ 1.47
ATPAF2-202ENST00000462733 HSPA1LP34931 641 aa24.21■■□□□ 1.47
ATPAF2-202ENST00000462733 CABLES1Q8TDN4 633 aa24.21■■□□□ 1.47
ATPAF2-202ENST00000462733 HNRNPUQ00839 825 aaKnown RBP eCLIP24.2■■□□□ 1.46
ATPAF2-202ENST00000462733 MED1Q15648 1581 aaPredicted RBP24.19■■□□□ 1.46
ATPAF2-202ENST00000462733 USP19O94966 1318 aa24.18■■□□□ 1.46
ATPAF2-202ENST00000462733 PPP2R1AP30153 589 aa24.17■■□□□ 1.46
ATPAF2-202ENST00000462733 MAP2P11137 1827 aaKnown RBP24.17■■□□□ 1.46
ATPAF2-202ENST00000462733 PNPLA6Q8IY17 1366 aa24.17■■□□□ 1.46
ATPAF2-202ENST00000462733 MYBBP1AQ9BQG0 1328 aaKnown RBP24.16■■□□□ 1.46
ATPAF2-202ENST00000462733 GCP02774 474 aa24.15■■□□□ 1.46
ATPAF2-202ENST00000462733 SLIT3O75094 1523 aa24.15■■□□□ 1.46
ATPAF2-202ENST00000462733 PHRF1Q9P1Y6 1649 aaKnown RBP24.15■■□□□ 1.46
ATPAF2-202ENST00000462733 HAP1P54257 671 aaPredicted RBP24.15■■□□□ 1.46
ATPAF2-202ENST00000462733 RRS1Q15050 365 aaKnown RBP24.15■■□□□ 1.46
ATPAF2-202ENST00000462733 KCNH5Q8NCM2 988 aa24.15■■□□□ 1.46
ATPAF2-202ENST00000462733 CRYBG1Q9Y4K1 1723 aa24.14■■□□□ 1.46
ATPAF2-202ENST00000462733 FBXO41Q8TF61 875 aa24.13■■□□□ 1.45
ATPAF2-202ENST00000462733 AATKQ6ZMQ8 1374 aa24.13■■□□□ 1.45
ATPAF2-202ENST00000462733 COL22A1Q8NFW1 1626 aaPredicted RBP24.12■■□□□ 1.45
ATPAF2-202ENST00000462733 ZBTB7CA1YPR0 619 aa24.12■■□□□ 1.45
ATPAF2-202ENST00000462733 PPM1GO15355 546 aaPredicted RBP24.12■■□□□ 1.45
ATPAF2-202ENST00000462733 TSHZ2Q9NRE2 1034 aa24.12■■□□□ 1.45
ATPAF2-202ENST00000462733 ABCA3Q99758 1704 aa24.11■■□□□ 1.45
ATPAF2-202ENST00000462733 NFAT5O94916 1531 aa24.11■■□□□ 1.45
ATPAF2-202ENST00000462733 JCADQ9P266 1359 aa24.11■■□□□ 1.45
ATPAF2-202ENST00000462733 ZC3H6P61129 1189 aaKnown RBP24.11■■□□□ 1.45
ATPAF2-202ENST00000462733 POLKQ9UBT6 870 aa24.11■■□□□ 1.45
ATPAF2-202ENST00000462733 EMILIN1Q9Y6C2 1016 aa24.11■■□□□ 1.45
ATPAF2-202ENST00000462733 MTHFSP49914 203 aa24.1■■□□□ 1.45
ATPAF2-202ENST00000462733 SHPRHQ149N8 1683 aa24.1■■□□□ 1.45
ATPAF2-202ENST00000462733 ERICH6BQ5W0A0 696 aa24.1■■□□□ 1.45
ATPAF2-202ENST00000462733 MAP3K19Q56UN5 1328 aa24.09■■□□□ 1.45
ATPAF2-202ENST00000462733 MRS2Q9HD23 443 aa24.09■■□□□ 1.45
ATPAF2-202ENST00000462733 LTN1O94822 1766 aa24.09■■□□□ 1.45
ATPAF2-202ENST00000462733 ZBED9Q6R2W3 1325 aa24.08■■□□□ 1.45
ATPAF2-202ENST00000462733 NUTM2BA6NNL0 878 aaPredicted RBP24.07■■□□□ 1.44
ATPAF2-202ENST00000462733 NUTM2EB1AL46 878 aaPredicted RBP24.07■■□□□ 1.44
ATPAF2-202ENST00000462733 NUTM2AQ8IVF1 878 aaPredicted RBP24.07■■□□□ 1.44
ATPAF2-202ENST00000462733 AMPHP49418 695 aa24.06■■□□□ 1.44
ATPAF2-202ENST00000462733 CCDC184Q52MB2 194 aa24.06■■□□□ 1.44
ATPAF2-202ENST00000462733 ARHGEF25Q86VW2 580 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms