RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 USP32Q8NFA0 1604 aa15.05■□□□□ 0
TRAPPC3-205ENST00000462715 NUDT16Q96DE0 195 aaKnown RBP15.05■□□□□ 0
TRAPPC3-205ENST00000462715 ATP7BP35670 1465 aa15.05■□□□□ 0
TRAPPC3-205ENST00000462715 ITSN1Q15811 1721 aa15.05■□□□□ -0
TRAPPC3-205ENST00000462715 CABP2Q9NPB3 220 aa15.05■□□□□ -0
TRAPPC3-205ENST00000462715 KIF1AQ12756 1690 aa15.04■□□□□ -0
TRAPPC3-205ENST00000462715 ORAI2Q96SN7 254 aa15.04■□□□□ -0
TRAPPC3-205ENST00000462715 CDCA8Q53HL2 280 aa15.04■□□□□ -0
TRAPPC3-205ENST00000462715 PRR36Q9H6K5 1346 aa15.04■□□□□ -0
TRAPPC3-205ENST00000462715 ATAD2Q6PL18 1390 aa15.04■□□□□ -0
TRAPPC3-205ENST00000462715 PUS7Q96PZ0 661 aaKnown RBP15.03■□□□□ -0
TRAPPC3-205ENST00000462715 CCDC61Q9Y6R9 512 aa15.03■□□□□ -0
TRAPPC3-205ENST00000462715 RGPD8O14715 1765 aaPredicted RBP15.03■□□□□ -0
TRAPPC3-205ENST00000462715 PHF8Q9UPP1 1060 aa15.03■□□□□ -0
TRAPPC3-205ENST00000462715 TOPAZ1Q8N9V7 1692 aa15.02□□□□□ -0.01
TRAPPC3-205ENST00000462715 DISP3Q9P2K9 1392 aa15.01□□□□□ -0.01
TRAPPC3-205ENST00000462715 RRP9O43818 475 aaKnown RBP15.01□□□□□ -0.01
TRAPPC3-205ENST00000462715 AHDC1Q5TGY3 1603 aaPredicted RBP15.01□□□□□ -0.01
TRAPPC3-205ENST00000462715 NPHP3Q7Z494 1330 aa15.01□□□□□ -0.01
TRAPPC3-205ENST00000462715 ZMYND15Q9H091 742 aa15.01□□□□□ -0.01
TRAPPC3-205ENST00000462715 NUDCQ9Y266 331 aa15.01□□□□□ -0.01
TRAPPC3-205ENST00000462715 PPIP5K1Q6PFW1 1433 aa15□□□□□ -0.01
TRAPPC3-205ENST00000462715 NHSL1Q5SYE7 1610 aa15□□□□□ -0.01
TRAPPC3-205ENST00000462715 BACH2Q9BYV9 841 aa15□□□□□ -0.01
TRAPPC3-205ENST00000462715 PMFBP1Q8TBY8 1022 aa14.99□□□□□ -0.01
TRAPPC3-205ENST00000462715 NGDNQ8NEJ9 315 aaKnown RBP14.98□□□□□ -0.01
TRAPPC3-205ENST00000462715 PHLPP1O60346 1717 aa14.98□□□□□ -0.01
TRAPPC3-205ENST00000462715 PLEKHG3A1L390 1219 aa14.98□□□□□ -0.01
TRAPPC3-205ENST00000462715 FOXO3O43524 673 aa14.98□□□□□ -0.01
TRAPPC3-205ENST00000462715 PODXL2Q9NZ53 605 aa14.98□□□□□ -0.01
TRAPPC3-205ENST00000462715 NINLQ9Y2I6 1382 aa14.98□□□□□ -0.01
TRAPPC3-205ENST00000462715 CABP1Q9NZU7 370 aa14.97□□□□□ -0.01
TRAPPC3-205ENST00000462715 PDE4AP27815 886 aa14.96□□□□□ -0.01
TRAPPC3-205ENST00000462715 HSPA1LP34931 641 aa14.96□□□□□ -0.01
TRAPPC3-205ENST00000462715 PSME1Q06323 249 aa14.96□□□□□ -0.01
TRAPPC3-205ENST00000462715 LAS1LQ9Y4W2 734 aaKnown RBP14.96□□□□□ -0.01
TRAPPC3-205ENST00000462715 NFKBIBQ15653 356 aa14.96□□□□□ -0.01
TRAPPC3-205ENST00000462715 TMC1Q8TDI8 760 aa14.96□□□□□ -0.01
TRAPPC3-205ENST00000462715 PRKRIP1Q9H875 184 aaPredicted RBP14.96□□□□□ -0.01
TRAPPC3-205ENST00000462715 POLR3AO14802 1390 aaPredicted RBP14.96□□□□□ -0.01
TRAPPC3-205ENST00000462715 FRAT1Q92837 279 aaPredicted RBP14.95□□□□□ -0.02
TRAPPC3-205ENST00000462715 DDX17Q92841 729 aaKnown RBP14.95□□□□□ -0.02
TRAPPC3-205ENST00000462715 ACEP12821 1306 aa14.95□□□□□ -0.02
TRAPPC3-205ENST00000462715 COL16A1Q07092 1604 aaPredicted RBP14.95□□□□□ -0.02
TRAPPC3-205ENST00000462715 SOS2Q07890 1332 aaPredicted RBP14.95□□□□□ -0.02
TRAPPC3-205ENST00000462715 PXDNQ92626 1479 aa14.94□□□□□ -0.02
TRAPPC3-205ENST00000462715 ILDR1Q86SU0 546 aaPredicted RBP14.94□□□□□ -0.02
TRAPPC3-205ENST00000462715 KRT28Q7Z3Y7 464 aa14.94□□□□□ -0.02
TRAPPC3-205ENST00000462715 POLR3GLQ9BT43 218 aa14.93□□□□□ -0.02
TRAPPC3-205ENST00000462715 LRRC59Q96AG4 307 aaKnown RBP14.93□□□□□ -0.02
TRAPPC3-205ENST00000462715 ZNF692Q9BU19 519 aaPredicted RBP14.93□□□□□ -0.02
TRAPPC3-205ENST00000462715 TERF2IPQ9NYB0 399 aa14.93□□□□□ -0.02
TRAPPC3-205ENST00000462715 XPCQ01831 940 aaPredicted RBP14.92□□□□□ -0.02
TRAPPC3-205ENST00000462715 HDGFL2Q7Z4V5 671 aaPredicted RBP14.92□□□□□ -0.02
TRAPPC3-205ENST00000462715 VSIG10Q8N0Z9 540 aa14.92□□□□□ -0.02
TRAPPC3-205ENST00000462715 SLC12A5Q9H2X9 1139 aa14.92□□□□□ -0.02
TRAPPC3-205ENST00000462715 SBNO1A3KN83 1393 aa14.91□□□□□ -0.02
TRAPPC3-205ENST00000462715 BRD4O60885 1362 aaPredicted RBP14.91□□□□□ -0.02
TRAPPC3-205ENST00000462715 CPSF1Q10570 1443 aaKnown RBP14.9□□□□□ -0.02
TRAPPC3-205ENST00000462715 MRS2Q9HD23 443 aa14.9□□□□□ -0.02
TRAPPC3-205ENST00000462715 AKAP12Q02952 1782 aa14.9□□□□□ -0.02
TRAPPC3-205ENST00000462715 USP6P35125 1406 aa14.9□□□□□ -0.02
TRAPPC3-205ENST00000462715 KIF7Q2M1P5 1343 aa14.89□□□□□ -0.03
TRAPPC3-205ENST00000462715 KTN1Q86UP2 1357 aaKnown RBP14.89□□□□□ -0.03
TRAPPC3-205ENST00000462715 JCADQ9P266 1359 aa14.89□□□□□ -0.03
TRAPPC3-205ENST00000462715 TNS3Q68CZ2 1445 aa14.89□□□□□ -0.03
TRAPPC3-205ENST00000462715 ANKRD36BQ8N2N9 1353 aa14.89□□□□□ -0.03
TRAPPC3-205ENST00000462715 MYOM1P52179 1685 aa14.89□□□□□ -0.03
TRAPPC3-205ENST00000462715 SPATA31A3Q5VYP0 1347 aa14.88□□□□□ -0.03
TRAPPC3-205ENST00000462715 CD163L1Q9NR16 1453 aa14.88□□□□□ -0.03
TRAPPC3-205ENST00000462715 TRPM3Q9HCF6 1732 aaPredicted RBP14.88□□□□□ -0.03
TRAPPC3-205ENST00000462715 A0A1W2PP64 1363 aa14.88□□□□□ -0.03
TRAPPC3-205ENST00000462715 ARHGEF10O15013 1369 aa14.88□□□□□ -0.03
TRAPPC3-205ENST00000462715 HSP90AA2PQ14568 343 aaPredicted RBP14.88□□□□□ -0.03
TRAPPC3-205ENST00000462715 L1TD1Q5T7N2 865 aaKnown RBP14.88□□□□□ -0.03
TRAPPC3-205ENST00000462715 CCDC7Q96M83 1385 aa14.87□□□□□ -0.03
TRAPPC3-205ENST00000462715 MON2Q7Z3U7 1717 aa14.87□□□□□ -0.03
TRAPPC3-205ENST00000462715 SHPRHQ149N8 1683 aa14.87□□□□□ -0.03
TRAPPC3-205ENST00000462715 LMOD2Q6P5Q4 547 aa14.86□□□□□ -0.03
TRAPPC3-205ENST00000462715 EDC4Q6P2E9 1401 aaKnown RBP14.86□□□□□ -0.03
TRAPPC3-205ENST00000462715 PNPLA6Q8IY17 1366 aa14.86□□□□□ -0.03
TRAPPC3-205ENST00000462715 FAM9BQ8IZU0 186 aa14.85□□□□□ -0.03
TRAPPC3-205ENST00000462715 TTC21AQ8NDW8 1320 aa14.85□□□□□ -0.03
TRAPPC3-205ENST00000462715 ALS2Q96Q42 1657 aa14.85□□□□□ -0.03
TRAPPC3-205ENST00000462715 HSP90AA1P07900 732 aaKnown RBP14.85□□□□□ -0.03
TRAPPC3-205ENST00000462715 NPM2Q86SE8 214 aaKnown RBP14.85□□□□□ -0.03
TRAPPC3-205ENST00000462715 SSH2Q76I76 1423 aa14.85□□□□□ -0.03
TRAPPC3-205ENST00000462715 NRKQ7Z2Y5 1582 aa14.85□□□□□ -0.03
TRAPPC3-205ENST00000462715 SPATA31A6Q5VVP1 1343 aa14.84□□□□□ -0.03
TRAPPC3-205ENST00000462715 TTC21BQ7Z4L5 1316 aa14.84□□□□□ -0.03
TRAPPC3-205ENST00000462715 COL22A1Q8NFW1 1626 aaPredicted RBP14.83□□□□□ -0.03
TRAPPC3-205ENST00000462715 CCDC184Q52MB2 194 aa14.83□□□□□ -0.04
TRAPPC3-205ENST00000462715 ABTB2Q8N961 1025 aa14.83□□□□□ -0.04
TRAPPC3-205ENST00000462715 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.82□□□□□ -0.04
TRAPPC3-205ENST00000462715 CLCN1P35523 988 aa14.81□□□□□ -0.04
TRAPPC3-205ENST00000462715 PANK3Q9H999 370 aa14.81□□□□□ -0.04
TRAPPC3-205ENST00000462715 MED1Q15648 1581 aaPredicted RBP14.8□□□□□ -0.04
TRAPPC3-205ENST00000462715 NLRP13Q86W25 1043 aa14.8□□□□□ -0.04
TRAPPC3-205ENST00000462715 NSD3Q9BZ95 1437 aa14.8□□□□□ -0.04
TRAPPC3-205ENST00000462715 PIK3C2AO00443 1686 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 223.4 ms