RNA–Protein interactions for RNA: ENST00000462616.1

PMPCA-205, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 3,341 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-205ENST00000462616 ATP10AO60312 1499 aa16.54■□□□□ 0.24
PMPCA-205ENST00000462616 ARHGEF40Q8TER5 1519 aa16.54■□□□□ 0.24
PMPCA-205ENST00000462616 STAC3Q96MF2 364 aa16.53■□□□□ 0.24
PMPCA-205ENST00000462616 CD2BP2O95400 341 aaKnown RBP16.53■□□□□ 0.24
PMPCA-205ENST00000462616 STK26Q9P289 416 aa16.53■□□□□ 0.24
PMPCA-205ENST00000462616 RIPK4P57078 832 aa16.53■□□□□ 0.24
PMPCA-205ENST00000462616 ANP32BQ92688 251 aaKnown RBP16.53■□□□□ 0.24
PMPCA-205ENST00000462616 VIRMAQ69YN4 1812 aaKnown RBP16.52■□□□□ 0.24
PMPCA-205ENST00000462616 VWDEQ8N2E2 1590 aa16.52■□□□□ 0.24
PMPCA-205ENST00000462616 ZNF692Q9BU19 519 aaPredicted RBP16.52■□□□□ 0.24
PMPCA-205ENST00000462616 DDX49Q9Y6V7 483 aaKnown RBP16.52■□□□□ 0.24
PMPCA-205ENST00000462616 KDM5AP29375 1690 aaKnown RBP16.52■□□□□ 0.23
PMPCA-205ENST00000462616 SSFA2P28290 1259 aa16.52■□□□□ 0.23
PMPCA-205ENST00000462616 ARID3AQ99856 593 aa16.52■□□□□ 0.23
PMPCA-205ENST00000462616 IQGAP1P46940 1657 aa16.51■□□□□ 0.23
PMPCA-205ENST00000462616 TMPOP42166 694 aaKnown RBP16.51■□□□□ 0.23
PMPCA-205ENST00000462616 UGGT1Q9NYU2 1555 aa16.51■□□□□ 0.23
PMPCA-205ENST00000462616 HDAC1Q13547 482 aaPredicted RBP16.51■□□□□ 0.23
PMPCA-205ENST00000462616 AGLP35573 1532 aa16.5■□□□□ 0.23
PMPCA-205ENST00000462616 CHD1LQ86WJ1 897 aa16.5■□□□□ 0.23
PMPCA-205ENST00000462616 PHF23Q9BUL5 403 aaPredicted RBP16.5■□□□□ 0.23
PMPCA-205ENST00000462616 MROH1Q8NDA8 1641 aa16.5■□□□□ 0.23
PMPCA-205ENST00000462616 GGT6Q6P531 493 aa16.5■□□□□ 0.23
PMPCA-205ENST00000462616 GOLGA6L22H0YM25 854 aa16.49■□□□□ 0.23
PMPCA-205ENST00000462616 RRP9O43818 475 aaKnown RBP16.49■□□□□ 0.23
PMPCA-205ENST00000462616 SRPK2P78362 688 aaKnown RBP16.49■□□□□ 0.23
PMPCA-205ENST00000462616 SMC5Q8IY18 1101 aa16.49■□□□□ 0.23
PMPCA-205ENST00000462616 MYOM1P52179 1685 aa16.49■□□□□ 0.23
PMPCA-205ENST00000462616 ZBTB7CA1YPR0 619 aa16.49■□□□□ 0.23
PMPCA-205ENST00000462616 IPO8O15397 1037 aaKnown RBP16.48■□□□□ 0.23
PMPCA-205ENST00000462616 NASPP49321 788 aaPredicted RBP16.48■□□□□ 0.23
PMPCA-205ENST00000462616 APBB1O00213 710 aa16.48■□□□□ 0.23
PMPCA-205ENST00000462616 CCDC27Q2M243 656 aa16.48■□□□□ 0.23
PMPCA-205ENST00000462616 ZBTB40Q9NUA8 1239 aa16.48■□□□□ 0.23
PMPCA-205ENST00000462616 PTPRTO14522 1441 aa16.48■□□□□ 0.23
PMPCA-205ENST00000462616 RBM10P98175 930 aaKnown RBP16.47■□□□□ 0.23
PMPCA-205ENST00000462616 FBLN1P23142 703 aa16.47■□□□□ 0.23
PMPCA-205ENST00000462616 KIAA1211Q6ZU35 1233 aa16.47■□□□□ 0.23
PMPCA-205ENST00000462616 NUCB1Q02818 461 aa16.47■□□□□ 0.23
PMPCA-205ENST00000462616 GAS2L2Q8NHY3 880 aa16.47■□□□□ 0.23
PMPCA-205ENST00000462616 THUMPD2Q9BTF0 503 aaKnown RBP16.47■□□□□ 0.23
PMPCA-205ENST00000462616 TRIM35Q9UPQ4 493 aa16.47■□□□□ 0.23
PMPCA-205ENST00000462616 CLTCL1P53675 1640 aa16.46■□□□□ 0.23
PMPCA-205ENST00000462616 FOXD4L5Q5VV16 416 aaPredicted RBP16.46■□□□□ 0.23
PMPCA-205ENST00000462616 MCTP1Q6DN14 999 aa16.46■□□□□ 0.23
PMPCA-205ENST00000462616 FOXD4L4Q8WXT5 416 aaPredicted RBP16.46■□□□□ 0.23
PMPCA-205ENST00000462616 ZC3H13Q5T200 1668 aaKnown RBP16.46■□□□□ 0.23
PMPCA-205ENST00000462616 NOS1P29475 1434 aa16.46■□□□□ 0.23
PMPCA-205ENST00000462616 MSNP26038 577 aaKnown RBP16.46■□□□□ 0.23
PMPCA-205ENST00000462616 RAB3GAP1Q15042 981 aa16.46■□□□□ 0.23
PMPCA-205ENST00000462616 LMTK2Q8IWU2 1503 aa16.46■□□□□ 0.22
PMPCA-205ENST00000462616 RBM25P49756 843 aaKnown RBP16.45■□□□□ 0.22
PMPCA-205ENST00000462616 K7ELQ4 463 aaPredicted RBP16.45■□□□□ 0.22
PMPCA-205ENST00000462616 SKOR2Q2VWA4 1001 aaPredicted RBP16.45■□□□□ 0.22
PMPCA-205ENST00000462616 TBC1D9Q6ZT07 1266 aa16.45■□□□□ 0.22
PMPCA-205ENST00000462616 CAVIN1Q6NZI2 390 aaKnown RBP16.44■□□□□ 0.22
PMPCA-205ENST00000462616 SNX21Q969T3 373 aa16.43■□□□□ 0.22
PMPCA-205ENST00000462616 CEP152O94986 1710 aa16.42■□□□□ 0.22
PMPCA-205ENST00000462616 TRPM2O94759 1503 aa16.42■□□□□ 0.22
PMPCA-205ENST00000462616 TET3O43151 1660 aa16.42■□□□□ 0.22
PMPCA-205ENST00000462616 PODXL2Q9NZ53 605 aa16.42■□□□□ 0.22
PMPCA-205ENST00000462616 YEATS2Q9ULM3 1422 aa16.42■□□□□ 0.22
PMPCA-205ENST00000462616 ZMYM3Q14202 1370 aa16.42■□□□□ 0.22
PMPCA-205ENST00000462616 EVC2Q86UK5 1308 aa16.42■□□□□ 0.22
PMPCA-205ENST00000462616 KIF16BQ96L93 1317 aa16.42■□□□□ 0.22
PMPCA-205ENST00000462616 HMOX1P09601 288 aa16.42■□□□□ 0.22
PMPCA-205ENST00000462616 TPRNQ4KMQ1 711 aa16.42■□□□□ 0.22
PMPCA-205ENST00000462616 CFAP65Q6ZU64 1925 aaKnown RBP16.41■□□□□ 0.22
PMPCA-205ENST00000462616 KIF2CQ99661 725 aa16.41■□□□□ 0.22
PMPCA-205ENST00000462616 CIZ1Q9ULV3 898 aaPredicted RBP16.41■□□□□ 0.22
PMPCA-205ENST00000462616 RAPGEF3O95398 923 aa16.41■□□□□ 0.22
PMPCA-205ENST00000462616 FAM13BQ9NYF5 915 aa16.41■□□□□ 0.22
PMPCA-205ENST00000462616 ISY1Q9ULR0 285 aaKnown RBP16.41■□□□□ 0.22
PMPCA-205ENST00000462616 DDIT3P35638 169 aa16.4■□□□□ 0.22
PMPCA-205ENST00000462616 CALD1Q05682 793 aaKnown RBP16.4■□□□□ 0.22
PMPCA-205ENST00000462616 R3HCC1Q9Y3T6 440 aaKnown RBP16.4■□□□□ 0.22
PMPCA-205ENST00000462616 SIGLEC1Q9BZZ2 1709 aa16.4■□□□□ 0.22
PMPCA-205ENST00000462616 CT47B1P0C2W7 299 aaPredicted RBP16.4■□□□□ 0.22
PMPCA-205ENST00000462616 BMP2KLQ5H9B9 411 aa16.4■□□□□ 0.22
PMPCA-205ENST00000462616 SPHKAPQ2M3C7 1700 aa16.4■□□□□ 0.22
PMPCA-205ENST00000462616 BAG4O95429 457 aaKnown RBP16.4■□□□□ 0.22
PMPCA-205ENST00000462616 CHAMP1Q96JM3 812 aa16.4■□□□□ 0.22
PMPCA-205ENST00000462616 MINK1Q8N4C8 1332 aaPredicted RBP16.39■□□□□ 0.21
PMPCA-205ENST00000462616 IQSEC2Q5JU85 1478 aa16.39■□□□□ 0.21
PMPCA-205ENST00000462616 CCDC173Q0VFZ6 552 aa16.39■□□□□ 0.21
PMPCA-205ENST00000462616 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.39■□□□□ 0.21
PMPCA-205ENST00000462616 DIAPH1O60610 1272 aaKnown RBP16.39■□□□□ 0.21
PMPCA-205ENST00000462616 PKP1Q13835 747 aa16.38■□□□□ 0.21
PMPCA-205ENST00000462616 PLEKHF1Q96S99 279 aa16.38■□□□□ 0.21
PMPCA-205ENST00000462616 ZSCAN30Q86W11 494 aa16.38■□□□□ 0.21
PMPCA-205ENST00000462616 TSPYL6Q8N831 410 aa16.38■□□□□ 0.21
PMPCA-205ENST00000462616 C14orf93Q9H972 538 aaKnown RBP16.38■□□□□ 0.21
PMPCA-205ENST00000462616 PRKAR2BP31323 418 aa16.37■□□□□ 0.21
PMPCA-205ENST00000462616 PRPF40AO75400 957 aaKnown RBP16.37■□□□□ 0.21
PMPCA-205ENST00000462616 RBM27Q9P2N5 1060 aaKnown RBP16.37■□□□□ 0.21
PMPCA-205ENST00000462616 ATAD2Q6PL18 1390 aa16.36■□□□□ 0.21
PMPCA-205ENST00000462616 XPCQ01831 940 aaPredicted RBP16.36■□□□□ 0.21
PMPCA-205ENST00000462616 FOXD4L6Q3SYB3 417 aaPredicted RBP16.36■□□□□ 0.21
PMPCA-205ENST00000462616 FOXD4L3Q6VB84 417 aaPredicted RBP16.36■□□□□ 0.21
PMPCA-205ENST00000462616 C16orf71Q8IYS4 520 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms