RNA–Protein interactions for RNA: ENST00000462539.1

SREBF2-204, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-204ENST00000462539 DLG5Q8TDM6 1919 aa9.46□□□□□ -0.89
SREBF2-204ENST00000462539 DLC1Q96QB1 1528 aa9.46□□□□□ -0.89
SREBF2-204ENST00000462539 ALKQ9UM73 1620 aa9.46□□□□□ -0.89
SREBF2-204ENST00000462539 KNDC1Q76NI1 1749 aa9.46□□□□□ -0.89
SREBF2-204ENST00000462539 FRAT2O75474 233 aaPredicted RBP9.46□□□□□ -0.9
SREBF2-204ENST00000462539 BECN1Q14457 450 aa9.46□□□□□ -0.9
SREBF2-204ENST00000462539 MVPQ14764 893 aaKnown RBP9.46□□□□□ -0.9
SREBF2-204ENST00000462539 NEUROD2Q15784 382 aa9.46□□□□□ -0.9
SREBF2-204ENST00000462539 MON2Q7Z3U7 1717 aa9.45□□□□□ -0.9
SREBF2-204ENST00000462539 AKAP12Q02952 1782 aa9.45□□□□□ -0.9
SREBF2-204ENST00000462539 MAP2P11137 1827 aaKnown RBP9.45□□□□□ -0.9
SREBF2-204ENST00000462539 TBC1D32Q96NH3 1257 aa9.45□□□□□ -0.9
SREBF2-204ENST00000462539 RWDD1Q9H446 243 aaPredicted RBP9.45□□□□□ -0.9
SREBF2-204ENST00000462539 ATAD2Q6PL18 1390 aa9.45□□□□□ -0.9
SREBF2-204ENST00000462539 ITSN1Q15811 1721 aa9.45□□□□□ -0.9
SREBF2-204ENST00000462539 VGFO15240 615 aaPredicted RBP9.44□□□□□ -0.9
SREBF2-204ENST00000462539 ZKSCAN2Q63HK3 967 aa9.44□□□□□ -0.9
SREBF2-204ENST00000462539 GGT6Q6P531 493 aa9.44□□□□□ -0.9
SREBF2-204ENST00000462539 BCL2L13Q9BXK5 485 aa9.44□□□□□ -0.9
SREBF2-204ENST00000462539 BRPF3Q9ULD4 1205 aa9.44□□□□□ -0.9
SREBF2-204ENST00000462539 IL16Q14005 1332 aa9.44□□□□□ -0.9
SREBF2-204ENST00000462539 YTHDC2Q9H6S0 1430 aaKnown RBP9.44□□□□□ -0.9
SREBF2-204ENST00000462539 ARHGEF40Q8TER5 1519 aa9.44□□□□□ -0.9
SREBF2-204ENST00000462539 REREQ9P2R6 1566 aa9.44□□□□□ -0.9
SREBF2-204ENST00000462539 NRKQ7Z2Y5 1582 aa9.43□□□□□ -0.9
SREBF2-204ENST00000462539 FAM135BQ49AJ0 1406 aa9.43□□□□□ -0.9
SREBF2-204ENST00000462539 U2AF1L5P0DN76 240 aaPredicted RBP9.43□□□□□ -0.9
SREBF2-204ENST00000462539 U2AF1Q01081 240 aaKnown RBP eCLIP9.43□□□□□ -0.9
SREBF2-204ENST00000462539 PLEKHF1Q96S99 279 aa9.43□□□□□ -0.9
SREBF2-204ENST00000462539 CABP2Q9NPB3 220 aa9.43□□□□□ -0.9
SREBF2-204ENST00000462539 ATP7BP35670 1465 aa9.42□□□□□ -0.9
SREBF2-204ENST00000462539 YEATS2Q9ULM3 1422 aa9.42□□□□□ -0.9
SREBF2-204ENST00000462539 DZIP1LQ8IYY4 767 aaKnown RBP9.42□□□□□ -0.9
SREBF2-204ENST00000462539 ANTXR1Q9H6X2 564 aa9.42□□□□□ -0.9
SREBF2-204ENST00000462539 NRXN3Q9Y4C0 1643 aa9.42□□□□□ -0.9
SREBF2-204ENST00000462539 PPIP5K1Q6PFW1 1433 aa9.41□□□□□ -0.9
SREBF2-204ENST00000462539 PNPLA6Q8IY17 1366 aa9.41□□□□□ -0.9
SREBF2-204ENST00000462539 TMPOP42166 694 aaKnown RBP9.41□□□□□ -0.9
SREBF2-204ENST00000462539 EXOSC9Q06265 439 aaKnown RBP9.41□□□□□ -0.9
SREBF2-204ENST00000462539 TSR2Q969E8 191 aaKnown RBP9.41□□□□□ -0.9
SREBF2-204ENST00000462539 UPF2Q9HAU5 1272 aaKnown RBP9.41□□□□□ -0.9
SREBF2-204ENST00000462539 TRIM35Q9UPQ4 493 aa9.41□□□□□ -0.9
SREBF2-204ENST00000462539 C3P01024 1663 aa9.4□□□□□ -0.9
SREBF2-204ENST00000462539 NPM1P06748 294 aaKnown RBP eCLIP9.4□□□□□ -0.9
SREBF2-204ENST00000462539 HDAC1Q13547 482 aaPredicted RBP9.4□□□□□ -0.9
SREBF2-204ENST00000462539 NUTM2DQ5VT03 806 aaPredicted RBP9.4□□□□□ -0.9
SREBF2-204ENST00000462539 FTSJ3Q8IY81 847 aaKnown RBP9.4□□□□□ -0.9
SREBF2-204ENST00000462539 SMC4Q9NTJ3 1288 aa9.4□□□□□ -0.9
SREBF2-204ENST00000462539 SPATA31D1Q6ZQQ2 1576 aa9.4□□□□□ -0.9
SREBF2-204ENST00000462539 PTCH1Q13635 1447 aa9.39□□□□□ -0.91
SREBF2-204ENST00000462539 TRIM27P14373 513 aa9.39□□□□□ -0.91
SREBF2-204ENST00000462539 TBC1D2Q9BYX2 928 aa9.39□□□□□ -0.91
SREBF2-204ENST00000462539 GGNBP2Q9H3C7 697 aa9.39□□□□□ -0.91
SREBF2-204ENST00000462539 DDX19BQ9UMR2 479 aa9.39□□□□□ -0.91
SREBF2-204ENST00000462539 CDK12Q9NYV4 1490 aaPredicted RBP9.39□□□□□ -0.91
SREBF2-204ENST00000462539 NCOA3Q9Y6Q9 1424 aa9.39□□□□□ -0.91
SREBF2-204ENST00000462539 KIF16BQ96L93 1317 aa9.38□□□□□ -0.91
SREBF2-204ENST00000462539 AGLP35573 1532 aa9.38□□□□□ -0.91
SREBF2-204ENST00000462539 U2SURPO15042 1029 aaKnown RBP9.38□□□□□ -0.91
SREBF2-204ENST00000462539 SRPK2P78362 688 aaKnown RBP9.38□□□□□ -0.91
SREBF2-204ENST00000462539 IDI1Q13907 227 aa9.38□□□□□ -0.91
SREBF2-204ENST00000462539 ATF7IPQ6VMQ6 1270 aa9.38□□□□□ -0.91
SREBF2-204ENST00000462539 SMC5Q8IY18 1101 aa9.38□□□□□ -0.91
SREBF2-204ENST00000462539 SSH1Q8WYL5 1049 aa9.38□□□□□ -0.91
SREBF2-204ENST00000462539 SLKQ9H2G2 1235 aaPredicted RBP9.38□□□□□ -0.91
SREBF2-204ENST00000462539 SLC52A1Q9NWF4 448 aa9.38□□□□□ -0.91
SREBF2-204ENST00000462539 TERF2IPQ9NYB0 399 aa9.38□□□□□ -0.91
SREBF2-204ENST00000462539 POGKQ9P215 609 aa9.38□□□□□ -0.91
SREBF2-204ENST00000462539 TOPAZ1Q8N9V7 1692 aa9.38□□□□□ -0.91
SREBF2-204ENST00000462539 PIK3R4Q99570 1358 aa9.37□□□□□ -0.91
SREBF2-204ENST00000462539 MINK1Q8N4C8 1332 aaPredicted RBP9.37□□□□□ -0.91
SREBF2-204ENST00000462539 FYB1O15117 783 aa9.37□□□□□ -0.91
SREBF2-204ENST00000462539 SAFB2Q14151 953 aaKnown RBP eCLIP9.37□□□□□ -0.91
SREBF2-204ENST00000462539 NALCNQ8IZF0 1738 aa9.36□□□□□ -0.91
SREBF2-204ENST00000462539 CPS1P31327 1500 aa9.36□□□□□ -0.91
SREBF2-204ENST00000462539 DIAPH1O60610 1272 aaKnown RBP9.36□□□□□ -0.91
SREBF2-204ENST00000462539 RAPGEF3O95398 923 aa9.36□□□□□ -0.91
SREBF2-204ENST00000462539 ALDH1L2Q3SY69 923 aa9.36□□□□□ -0.91
SREBF2-204ENST00000462539 HDGFL2Q7Z4V5 671 aaPredicted RBP9.36□□□□□ -0.91
SREBF2-204ENST00000462539 ITPRIPQ8IWB1 547 aa9.36□□□□□ -0.91
SREBF2-204ENST00000462539 TMEM57Q8N5G2 664 aa9.36□□□□□ -0.91
SREBF2-204ENST00000462539 PRAM1Q96QH2 718 aa9.36□□□□□ -0.91
SREBF2-204ENST00000462539 STK26Q9P289 416 aa9.36□□□□□ -0.91
SREBF2-204ENST00000462539 DIP2BQ9P265 1576 aa9.36□□□□□ -0.91
SREBF2-204ENST00000462539 FMN2Q9NZ56 1722 aa9.36□□□□□ -0.91
SREBF2-204ENST00000462539 A2ML1A8K2U0 1454 aa9.35□□□□□ -0.91
SREBF2-204ENST00000462539 C22orf23Q9BZE7 217 aa9.35□□□□□ -0.91
SREBF2-204ENST00000462539 PNNQ9H307 717 aaKnown RBP9.35□□□□□ -0.91
SREBF2-204ENST00000462539 NOB1Q9ULX3 412 aaKnown RBP9.35□□□□□ -0.91
SREBF2-204ENST00000462539 RGPD1P0DJD0 1748 aa9.34□□□□□ -0.91
SREBF2-204ENST00000462539 EDC4Q6P2E9 1401 aaKnown RBP9.34□□□□□ -0.91
SREBF2-204ENST00000462539 MFAP1P55081 439 aaKnown RBP9.34□□□□□ -0.91
SREBF2-204ENST00000462539 BRPF1P55201 1214 aaPredicted RBP9.34□□□□□ -0.91
SREBF2-204ENST00000462539 RIPK4P57078 832 aa9.34□□□□□ -0.91
SREBF2-204ENST00000462539 L1TD1Q5T7N2 865 aaKnown RBP9.34□□□□□ -0.91
SREBF2-204ENST00000462539 FAM43AQ8N2R8 423 aa9.34□□□□□ -0.91
SREBF2-204ENST00000462539 RSPH6AQ9H0K4 717 aa9.34□□□□□ -0.91
SREBF2-204ENST00000462539 ZBTB40Q9NUA8 1239 aa9.34□□□□□ -0.91
SREBF2-204ENST00000462539 TSPOAP1O95153 1857 aa9.34□□□□□ -0.91
SREBF2-204ENST00000462539 CPSF1Q10570 1443 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms