RNA–Protein interactions for RNA: ENST00000462297.1

AUP1-203, Transcript of AUP1, lipid droplet regulating VLDL assembly factor, humanhuman

TSL 3

Gene AUP1, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AUP1-203ENST00000462297 C11orf95C9JLR9 678 aaPredicted RBP13.84□□□□□ -0.19
AUP1-203ENST00000462297 CDCA8Q53HL2 280 aa13.84□□□□□ -0.19
AUP1-203ENST00000462297 ARHGEF10O15013 1369 aa13.83□□□□□ -0.19
AUP1-203ENST00000462297 KTN1Q86UP2 1357 aaKnown RBP13.83□□□□□ -0.19
AUP1-203ENST00000462297 CPSF1Q10570 1443 aaKnown RBP13.83□□□□□ -0.2
AUP1-203ENST00000462297 ALS2Q96Q42 1657 aa13.83□□□□□ -0.2
AUP1-203ENST00000462297 ADAMTS2O95450 1211 aa13.83□□□□□ -0.2
AUP1-203ENST00000462297 MEX3CQ5U5Q3 659 aaKnown RBP13.83□□□□□ -0.2
AUP1-203ENST00000462297 A0A1W2PP64 1363 aa13.83□□□□□ -0.2
AUP1-203ENST00000462297 AKAP12Q02952 1782 aa13.82□□□□□ -0.2
AUP1-203ENST00000462297 HDGFL2Q7Z4V5 671 aaPredicted RBP13.82□□□□□ -0.2
AUP1-203ENST00000462297 ZNF692Q9BU19 519 aaPredicted RBP13.82□□□□□ -0.2
AUP1-203ENST00000462297 SSH2Q76I76 1423 aa13.81□□□□□ -0.2
AUP1-203ENST00000462297 ABTB2Q8N961 1025 aa13.81□□□□□ -0.2
AUP1-203ENST00000462297 TERF2IPQ9NYB0 399 aa13.81□□□□□ -0.2
AUP1-203ENST00000462297 TTC21BQ7Z4L5 1316 aa13.81□□□□□ -0.2
AUP1-203ENST00000462297 NINLQ9Y2I6 1382 aa13.81□□□□□ -0.2
AUP1-203ENST00000462297 HAP1P54257 671 aaPredicted RBP13.8□□□□□ -0.2
AUP1-203ENST00000462297 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.8□□□□□ -0.2
AUP1-203ENST00000462297 NRKQ7Z2Y5 1582 aa13.79□□□□□ -0.2
AUP1-203ENST00000462297 MYOM1P52179 1685 aa13.79□□□□□ -0.2
AUP1-203ENST00000462297 MON2Q7Z3U7 1717 aa13.79□□□□□ -0.2
AUP1-203ENST00000462297 C8orf37Q96NL8 207 aa13.79□□□□□ -0.2
AUP1-203ENST00000462297 BRD4O60885 1362 aaPredicted RBP13.79□□□□□ -0.2
AUP1-203ENST00000462297 ZEB1P37275 1124 aaPredicted RBP13.78□□□□□ -0.2
AUP1-203ENST00000462297 ZRANB1Q9UGI0 708 aa13.78□□□□□ -0.2
AUP1-203ENST00000462297 KIF7Q2M1P5 1343 aa13.78□□□□□ -0.2
AUP1-203ENST00000462297 ANKRD36BQ8N2N9 1353 aa13.78□□□□□ -0.2
AUP1-203ENST00000462297 ABCA3Q99758 1704 aa13.78□□□□□ -0.2
AUP1-203ENST00000462297 PIK3C2AO00443 1686 aa13.77□□□□□ -0.21
AUP1-203ENST00000462297 NLRP6P59044 892 aa13.77□□□□□ -0.21
AUP1-203ENST00000462297 ZNF772Q68DY9 489 aaPredicted RBP13.77□□□□□ -0.21
AUP1-203ENST00000462297 EDC4Q6P2E9 1401 aaKnown RBP13.77□□□□□ -0.21
AUP1-203ENST00000462297 NME9Q86XW9 330 aa13.77□□□□□ -0.21
AUP1-203ENST00000462297 RGS17Q9UGC6 210 aaPredicted RBP13.77□□□□□ -0.21
AUP1-203ENST00000462297 TTC21AQ8NDW8 1320 aa13.76□□□□□ -0.21
AUP1-203ENST00000462297 CRYBG1Q9Y4K1 1723 aa13.76□□□□□ -0.21
AUP1-203ENST00000462297 USP19O94966 1318 aa13.75□□□□□ -0.21
AUP1-203ENST00000462297 AFF2P51816 1311 aa13.75□□□□□ -0.21
AUP1-203ENST00000462297 ILDR2Q71H61 639 aa13.75□□□□□ -0.21
AUP1-203ENST00000462297 NLRP13Q86W25 1043 aa13.75□□□□□ -0.21
AUP1-203ENST00000462297 NGLY1Q96IV0 654 aa13.75□□□□□ -0.21
AUP1-203ENST00000462297 CARD14Q9BXL6 1004 aa13.75□□□□□ -0.21
AUP1-203ENST00000462297 SOX12O15370 315 aa13.74□□□□□ -0.21
AUP1-203ENST00000462297 PHRF1Q9P1Y6 1649 aaKnown RBP13.74□□□□□ -0.21
AUP1-203ENST00000462297 NSD3Q9BZ95 1437 aa13.73□□□□□ -0.21
AUP1-203ENST00000462297 MARF1Q9Y4F3 1742 aaKnown RBP13.73□□□□□ -0.21
AUP1-203ENST00000462297 CCDC7Q96M83 1385 aa13.73□□□□□ -0.21
AUP1-203ENST00000462297 WASHC2AQ641Q2 1341 aa13.73□□□□□ -0.21
AUP1-203ENST00000462297 ZC3H6P61129 1189 aaKnown RBP13.73□□□□□ -0.21
AUP1-203ENST00000462297 FAM83GA6ND36 823 aa13.72□□□□□ -0.21
AUP1-203ENST00000462297 GCP02774 474 aa13.72□□□□□ -0.21
AUP1-203ENST00000462297 POTEAQ6S8J7 498 aa13.72□□□□□ -0.21
AUP1-203ENST00000462297 PANK3Q9H999 370 aa13.72□□□□□ -0.21
AUP1-203ENST00000462297 KIAA0232Q92628 1395 aa13.71□□□□□ -0.21
AUP1-203ENST00000462297 SLIT3O75094 1523 aa13.71□□□□□ -0.21
AUP1-203ENST00000462297 ZBTB7CA1YPR0 619 aa13.71□□□□□ -0.21
AUP1-203ENST00000462297 CHRNA2Q15822 529 aa13.71□□□□□ -0.21
AUP1-203ENST00000462297 PRDM11Q9NQV5 511 aa13.71□□□□□ -0.21
AUP1-203ENST00000462297 USP31Q70CQ4 1352 aa13.71□□□□□ -0.22
AUP1-203ENST00000462297 FNBP4Q8N3X1 1017 aaPredicted RBP13.7□□□□□ -0.22
AUP1-203ENST00000462297 GGNBP2Q9H3C7 697 aa13.7□□□□□ -0.22
AUP1-203ENST00000462297 SLIT2O94813 1529 aa13.69□□□□□ -0.22
AUP1-203ENST00000462297 FYB1O15117 783 aa13.69□□□□□ -0.22
AUP1-203ENST00000462297 USP21Q9UK80 565 aa13.69□□□□□ -0.22
AUP1-203ENST00000462297 OVOS2A0A0J9YW53 1432 aa13.69□□□□□ -0.22
AUP1-203ENST00000462297 OVOS2Q6IE36 1432 aa13.69□□□□□ -0.22
AUP1-203ENST00000462297 CDK12Q9NYV4 1490 aaPredicted RBP13.68□□□□□ -0.22
AUP1-203ENST00000462297 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.68□□□□□ -0.22
AUP1-203ENST00000462297 COG3Q96JB2 828 aa13.68□□□□□ -0.22
AUP1-203ENST00000462297 BCL9LQ86UU0 1499 aa13.67□□□□□ -0.22
AUP1-203ENST00000462297 ATRNO75882 1429 aa13.67□□□□□ -0.22
AUP1-203ENST00000462297 PLCH1Q4KWH8 1693 aa13.67□□□□□ -0.22
AUP1-203ENST00000462297 USP54Q70EL1 1684 aa13.67□□□□□ -0.22
AUP1-203ENST00000462297 BTG4Q9NY30 223 aa13.67□□□□□ -0.22
AUP1-203ENST00000462297 NFAT5O94916 1531 aa13.67□□□□□ -0.22
AUP1-203ENST00000462297 CPDO75976 1380 aa13.67□□□□□ -0.22
AUP1-203ENST00000462297 NWD2Q9ULI1 1742 aa13.67□□□□□ -0.22
AUP1-203ENST00000462297 COL14A1Q05707 1796 aaKnown RBP13.66□□□□□ -0.22
AUP1-203ENST00000462297 FBLN1P23142 703 aa13.66□□□□□ -0.22
AUP1-203ENST00000462297 KCNH5Q8NCM2 988 aa13.66□□□□□ -0.22
AUP1-203ENST00000462297 QTRT2Q9H974 415 aaKnown RBP13.66□□□□□ -0.22
AUP1-203ENST00000462297 TRPC5Q9UL62 973 aaPredicted RBP13.66□□□□□ -0.22
AUP1-203ENST00000462297 KIF20BQ96Q89 1820 aa13.66□□□□□ -0.22
AUP1-203ENST00000462297 CGNL1Q0VF96 1302 aa13.65□□□□□ -0.22
AUP1-203ENST00000462297 SOCS7O14512 581 aa13.65□□□□□ -0.22
AUP1-203ENST00000462297 RXRBP28702 533 aa13.65□□□□□ -0.22
AUP1-203ENST00000462297 UNC5CLQ8IV45 518 aa13.65□□□□□ -0.22
AUP1-203ENST00000462297 RBM6P78332 1123 aaKnown RBP13.64□□□□□ -0.23
AUP1-203ENST00000462297 ARHGEF25Q86VW2 580 aa13.64□□□□□ -0.23
AUP1-203ENST00000462297 STRN4Q9NRL3 753 aa13.63□□□□□ -0.23
AUP1-203ENST00000462297 KNSTRNQ9Y448 316 aa13.63□□□□□ -0.23
AUP1-203ENST00000462297 CAMTA1Q9Y6Y1 1673 aa13.63□□□□□ -0.23
AUP1-203ENST00000462297 NRAPQ86VF7 1730 aa13.62□□□□□ -0.23
AUP1-203ENST00000462297 AATKQ6ZMQ8 1374 aa13.62□□□□□ -0.23
AUP1-203ENST00000462297 AXIN2Q9Y2T1 843 aa13.62□□□□□ -0.23
AUP1-203ENST00000462297 CCDC9Q9Y3X0 531 aaKnown RBP13.62□□□□□ -0.23
AUP1-203ENST00000462297 RGS12O14924 1447 aa13.62□□□□□ -0.23
AUP1-203ENST00000462297 LMO7Q8WWI1 1683 aa13.62□□□□□ -0.23
AUP1-203ENST00000462297 TNNT2P45379 298 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms