RNA–Protein interactions for RNA: ENST00000462268.1

SYN3-207, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-207ENST00000462268 USP21Q9UK80 565 aa12.61□□□□□ -0.39
SYN3-207ENST00000462268 RBM6P78332 1123 aaKnown RBP12.6□□□□□ -0.39
SYN3-207ENST00000462268 QTRT2Q9H974 415 aaKnown RBP12.6□□□□□ -0.39
SYN3-207ENST00000462268 TRPC5Q9UL62 973 aaPredicted RBP12.6□□□□□ -0.39
SYN3-207ENST00000462268 CCDC61Q9Y6R9 512 aa12.6□□□□□ -0.39
SYN3-207ENST00000462268 SRPK2P78362 688 aaKnown RBP12.58□□□□□ -0.4
SYN3-207ENST00000462268 POLR3AO14802 1390 aaPredicted RBP12.57□□□□□ -0.4
SYN3-207ENST00000462268 TRPM1Q7Z4N2 1603 aa12.57□□□□□ -0.4
SYN3-207ENST00000462268 ATRNO75882 1429 aa12.56□□□□□ -0.4
SYN3-207ENST00000462268 PLEKHG3A1L390 1219 aa12.56□□□□□ -0.4
SYN3-207ENST00000462268 PAK3O75914 559 aaPredicted RBP12.56□□□□□ -0.4
SYN3-207ENST00000462268 NBPF8Q3BBV2 869 aa12.56□□□□□ -0.4
SYN3-207ENST00000462268 EVC2Q86UK5 1308 aa12.56□□□□□ -0.4
SYN3-207ENST00000462268 RGS12O14924 1447 aa12.55□□□□□ -0.4
SYN3-207ENST00000462268 BCL9LQ86UU0 1499 aa12.55□□□□□ -0.4
SYN3-207ENST00000462268 CHRDL2Q6WN34 429 aa12.55□□□□□ -0.4
SYN3-207ENST00000462268 CABLES1Q8TDN4 633 aa12.55□□□□□ -0.4
SYN3-207ENST00000462268 CARD11Q9BXL7 1154 aa12.55□□□□□ -0.4
SYN3-207ENST00000462268 SLIT2O94813 1529 aa12.55□□□□□ -0.4
SYN3-207ENST00000462268 ACEP12821 1306 aa12.55□□□□□ -0.4
SYN3-207ENST00000462268 PPIP5K1Q6PFW1 1433 aa12.54□□□□□ -0.4
SYN3-207ENST00000462268 ITSN1Q15811 1721 aa12.54□□□□□ -0.4
SYN3-207ENST00000462268 RALGAPBQ86X10 1494 aa12.54□□□□□ -0.4
SYN3-207ENST00000462268 PLEKHG5O94827 1062 aa12.54□□□□□ -0.4
SYN3-207ENST00000462268 UNC5CLQ8IV45 518 aa12.54□□□□□ -0.4
SYN3-207ENST00000462268 CABP2Q9NPB3 220 aa12.54□□□□□ -0.4
SYN3-207ENST00000462268 RGPD8O14715 1765 aaPredicted RBP12.53□□□□□ -0.4
SYN3-207ENST00000462268 POLA2Q14181 598 aa12.53□□□□□ -0.4
SYN3-207ENST00000462268 TRPM3Q9HCF6 1732 aaPredicted RBP12.53□□□□□ -0.4
SYN3-207ENST00000462268 BRD4O60885 1362 aaPredicted RBP12.53□□□□□ -0.4
SYN3-207ENST00000462268 SBNO2Q9Y2G9 1366 aa12.53□□□□□ -0.4
SYN3-207ENST00000462268 TOPAZ1Q8N9V7 1692 aa12.52□□□□□ -0.4
SYN3-207ENST00000462268 QRICH2Q9H0J4 1663 aa12.52□□□□□ -0.4
SYN3-207ENST00000462268 ATAD2Q6PL18 1390 aa12.52□□□□□ -0.41
SYN3-207ENST00000462268 GJD4Q96KN9 370 aaPredicted RBP12.51□□□□□ -0.41
SYN3-207ENST00000462268 CLSPNQ9HAW4 1339 aa12.51□□□□□ -0.41
SYN3-207ENST00000462268 ALS2Q96Q42 1657 aa12.51□□□□□ -0.41
SYN3-207ENST00000462268 FAM83GA6ND36 823 aa12.49□□□□□ -0.41
SYN3-207ENST00000462268 VPS72Q15906 364 aa12.49□□□□□ -0.41
SYN3-207ENST00000462268 ABTB2Q8N961 1025 aa12.49□□□□□ -0.41
SYN3-207ENST00000462268 PRDM11Q9NQV5 511 aa12.49□□□□□ -0.41
SYN3-207ENST00000462268 CABP1Q9NZU7 370 aa12.49□□□□□ -0.41
SYN3-207ENST00000462268 MARF1Q9Y4F3 1742 aaKnown RBP12.48□□□□□ -0.41
SYN3-207ENST00000462268 USP6P35125 1406 aa12.48□□□□□ -0.41
SYN3-207ENST00000462268 MYCNP04198 464 aaPredicted RBP12.48□□□□□ -0.41
SYN3-207ENST00000462268 UPF1Q92900 1129 aaKnown RBP eCLIP12.48□□□□□ -0.41
SYN3-207ENST00000462268 ABCA3Q99758 1704 aa12.48□□□□□ -0.41
SYN3-207ENST00000462268 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.48□□□□□ -0.41
SYN3-207ENST00000462268 NLRP13Q86W25 1043 aa12.47□□□□□ -0.41
SYN3-207ENST00000462268 BTG4Q9NY30 223 aa12.47□□□□□ -0.41
SYN3-207ENST00000462268 CCDC9Q9Y3X0 531 aaKnown RBP12.47□□□□□ -0.41
SYN3-207ENST00000462268 KIAA0232Q92628 1395 aa12.46□□□□□ -0.41
SYN3-207ENST00000462268 USP19O94966 1318 aa12.46□□□□□ -0.41
SYN3-207ENST00000462268 SLC24A1O60721 1099 aa12.46□□□□□ -0.41
SYN3-207ENST00000462268 NUTM2GQ5VZR2 741 aa12.46□□□□□ -0.41
SYN3-207ENST00000462268 ZNF692Q9BU19 519 aaPredicted RBP12.46□□□□□ -0.41
SYN3-207ENST00000462268 PCGF6Q9BYE7 350 aa12.46□□□□□ -0.41
SYN3-207ENST00000462268 TIMELESSQ9UNS1 1208 aa12.46□□□□□ -0.41
SYN3-207ENST00000462268 NWD2Q9ULI1 1742 aa12.45□□□□□ -0.42
SYN3-207ENST00000462268 COL14A1Q05707 1796 aaKnown RBP12.44□□□□□ -0.42
SYN3-207ENST00000462268 SSH2Q76I76 1423 aa12.44□□□□□ -0.42
SYN3-207ENST00000462268 CPDO75976 1380 aa12.43□□□□□ -0.42
SYN3-207ENST00000462268 GLI3P10071 1580 aa12.43□□□□□ -0.42
SYN3-207ENST00000462268 TTC21AQ8NDW8 1320 aa12.43□□□□□ -0.42
SYN3-207ENST00000462268 PLCH1Q4KWH8 1693 aa12.43□□□□□ -0.42
SYN3-207ENST00000462268 ZC3H6P61129 1189 aaKnown RBP12.43□□□□□ -0.42
SYN3-207ENST00000462268 PUS7Q96PZ0 661 aaKnown RBP12.43□□□□□ -0.42
SYN3-207ENST00000462268 CRYBG1Q9Y4K1 1723 aa12.42□□□□□ -0.42
SYN3-207ENST00000462268 GCP02774 474 aa12.42□□□□□ -0.42
SYN3-207ENST00000462268 NLRP6P59044 892 aa12.42□□□□□ -0.42
SYN3-207ENST00000462268 CHRNA2Q15822 529 aa12.42□□□□□ -0.42
SYN3-207ENST00000462268 SEPT12Q8IYM1 358 aa12.42□□□□□ -0.42
SYN3-207ENST00000462268 CPSF1Q10570 1443 aaKnown RBP12.42□□□□□ -0.42
SYN3-207ENST00000462268 NRKQ7Z2Y5 1582 aa12.42□□□□□ -0.42
SYN3-207ENST00000462268 KTN1Q86UP2 1357 aaKnown RBP12.42□□□□□ -0.42
SYN3-207ENST00000462268 NINLQ9Y2I6 1382 aa12.42□□□□□ -0.42
SYN3-207ENST00000462268 TTC21BQ7Z4L5 1316 aa12.41□□□□□ -0.42
SYN3-207ENST00000462268 PHRF1Q9P1Y6 1649 aaKnown RBP12.41□□□□□ -0.42
SYN3-207ENST00000462268 ST20-MTHFSA0A0A6YYL1 179 aa12.41□□□□□ -0.42
SYN3-207ENST00000462268 A0A0G2JS52 829 aa12.41□□□□□ -0.42
SYN3-207ENST00000462268 ONECUT3O60422 494 aaPredicted RBP12.41□□□□□ -0.42
SYN3-207ENST00000462268 MYT1Q01538 1121 aa12.41□□□□□ -0.42
SYN3-207ENST00000462268 HDGFL2Q7Z4V5 671 aaPredicted RBP12.41□□□□□ -0.42
SYN3-207ENST00000462268 USP47Q96K76 1375 aa12.41□□□□□ -0.42
SYN3-207ENST00000462268 SPATA31A5Q5VU36 1347 aa12.4□□□□□ -0.42
SYN3-207ENST00000462268 SPATA31A7Q8IWB4 1347 aa12.4□□□□□ -0.42
SYN3-207ENST00000462268 TMC1Q8TDI8 760 aa12.4□□□□□ -0.42
SYN3-207ENST00000462268 TESK2Q96S53 571 aa12.4□□□□□ -0.42
SYN3-207ENST00000462268 NRAPQ86VF7 1730 aa12.4□□□□□ -0.43
SYN3-207ENST00000462268 SLIT3O75094 1523 aa12.39□□□□□ -0.43
SYN3-207ENST00000462268 FAM98CQ17RN3 349 aaKnown RBP12.39□□□□□ -0.43
SYN3-207ENST00000462268 CCDC125Q86Z20 511 aa12.39□□□□□ -0.43
SYN3-207ENST00000462268 KCNH5Q8NCM2 988 aa12.39□□□□□ -0.43
SYN3-207ENST00000462268 STRN4Q9NRL3 753 aa12.39□□□□□ -0.43
SYN3-207ENST00000462268 TERF2IPQ9NYB0 399 aa12.39□□□□□ -0.43
SYN3-207ENST00000462268 EVA1CP58658 441 aa12.38□□□□□ -0.43
SYN3-207ENST00000462268 KRT27Q7Z3Y8 459 aa12.38□□□□□ -0.43
SYN3-207ENST00000462268 CCER1Q8TC90 406 aaPredicted RBP12.38□□□□□ -0.43
SYN3-207ENST00000462268 SPATA31A1Q5TZJ5 1347 aa12.37□□□□□ -0.43
SYN3-207ENST00000462268 TMF1P82094 1093 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms