RNA–Protein interactions for RNA: ENST00000462163.1

RPN2-207, Transcript of ribophorin II, humanhuman

TSL 3

Gene RPN2, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN2-207ENST00000462163 USP54Q70EL1 1684 aa13.25□□□□□ -0.29
RPN2-207ENST00000462163 SSH2Q76I76 1423 aa13.25□□□□□ -0.29
RPN2-207ENST00000462163 SBNO1A3KN83 1393 aa13.25□□□□□ -0.29
RPN2-207ENST00000462163 PNPLA6Q8IY17 1366 aa13.25□□□□□ -0.29
RPN2-207ENST00000462163 ANKRD36BQ8N2N9 1353 aa13.25□□□□□ -0.29
RPN2-207ENST00000462163 KRT28Q7Z3Y7 464 aa13.25□□□□□ -0.29
RPN2-207ENST00000462163 SLC12A5Q9H2X9 1139 aa13.25□□□□□ -0.29
RPN2-207ENST00000462163 KTN1Q86UP2 1357 aaKnown RBP13.24□□□□□ -0.29
RPN2-207ENST00000462163 JCADQ9P266 1359 aa13.24□□□□□ -0.29
RPN2-207ENST00000462163 WASHC2AQ641Q2 1341 aa13.24□□□□□ -0.29
RPN2-207ENST00000462163 SOCS7O14512 581 aa13.24□□□□□ -0.29
RPN2-207ENST00000462163 PSME1Q06323 249 aa13.24□□□□□ -0.29
RPN2-207ENST00000462163 SPATA31A3Q5VYP0 1347 aa13.23□□□□□ -0.29
RPN2-207ENST00000462163 EDC4Q6P2E9 1401 aaKnown RBP13.22□□□□□ -0.29
RPN2-207ENST00000462163 BRD4O60885 1362 aaPredicted RBP13.22□□□□□ -0.29
RPN2-207ENST00000462163 ARHGEF10O15013 1369 aa13.21□□□□□ -0.29
RPN2-207ENST00000462163 LRP6O75581 1613 aa13.21□□□□□ -0.29
RPN2-207ENST00000462163 HDGFL2Q7Z4V5 671 aaPredicted RBP13.21□□□□□ -0.29
RPN2-207ENST00000462163 LRRC59Q96AG4 307 aaKnown RBP13.21□□□□□ -0.29
RPN2-207ENST00000462163 TERF2IPQ9NYB0 399 aa13.21□□□□□ -0.29
RPN2-207ENST00000462163 ANKRD26Q9UPS8 1709 aa13.21□□□□□ -0.3
RPN2-207ENST00000462163 NSD3Q9BZ95 1437 aa13.21□□□□□ -0.3
RPN2-207ENST00000462163 SLIT3O75094 1523 aa13.19□□□□□ -0.3
RPN2-207ENST00000462163 PAK3O75914 559 aaPredicted RBP13.19□□□□□ -0.3
RPN2-207ENST00000462163 ZNF692Q9BU19 519 aaPredicted RBP13.19□□□□□ -0.3
RPN2-207ENST00000462163 TTC21BQ7Z4L5 1316 aa13.18□□□□□ -0.3
RPN2-207ENST00000462163 LMOD2Q6P5Q4 547 aa13.18□□□□□ -0.3
RPN2-207ENST00000462163 ILDR2Q71H61 639 aa13.18□□□□□ -0.3
RPN2-207ENST00000462163 TTC21AQ8NDW8 1320 aa13.17□□□□□ -0.3
RPN2-207ENST00000462163 OVOS2A0A0J9YW53 1432 aa13.17□□□□□ -0.3
RPN2-207ENST00000462163 OVOS2Q6IE36 1432 aa13.17□□□□□ -0.3
RPN2-207ENST00000462163 PLCH1Q4KWH8 1693 aa13.16□□□□□ -0.3
RPN2-207ENST00000462163 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.16□□□□□ -0.3
RPN2-207ENST00000462163 USP19O94966 1318 aa13.15□□□□□ -0.3
RPN2-207ENST00000462163 SPATA31A6Q5VVP1 1343 aa13.15□□□□□ -0.3
RPN2-207ENST00000462163 NFAT5O94916 1531 aa13.15□□□□□ -0.3
RPN2-207ENST00000462163 PLEKHG5O94827 1062 aa13.15□□□□□ -0.3
RPN2-207ENST00000462163 NUTM2GQ5VZR2 741 aa13.15□□□□□ -0.3
RPN2-207ENST00000462163 NME9Q86XW9 330 aa13.15□□□□□ -0.3
RPN2-207ENST00000462163 ABTB2Q8N961 1025 aa13.15□□□□□ -0.3
RPN2-207ENST00000462163 CARD14Q9BXL6 1004 aa13.15□□□□□ -0.3
RPN2-207ENST00000462163 LTN1O94822 1766 aa13.15□□□□□ -0.31
RPN2-207ENST00000462163 PANK3Q9H999 370 aa13.14□□□□□ -0.31
RPN2-207ENST00000462163 USP31Q70CQ4 1352 aa13.14□□□□□ -0.31
RPN2-207ENST00000462163 CABLES1Q8TDN4 633 aa13.13□□□□□ -0.31
RPN2-207ENST00000462163 ZRANB1Q9UGI0 708 aa13.13□□□□□ -0.31
RPN2-207ENST00000462163 COL14A1Q05707 1796 aaKnown RBP13.12□□□□□ -0.31
RPN2-207ENST00000462163 NUTM2BA6NNL0 878 aaPredicted RBP13.12□□□□□ -0.31
RPN2-207ENST00000462163 NUTM2EB1AL46 878 aaPredicted RBP13.12□□□□□ -0.31
RPN2-207ENST00000462163 NUTM2AQ8IVF1 878 aaPredicted RBP13.12□□□□□ -0.31
RPN2-207ENST00000462163 NRAPQ86VF7 1730 aa13.11□□□□□ -0.31
RPN2-207ENST00000462163 NLRP6P59044 892 aa13.11□□□□□ -0.31
RPN2-207ENST00000462163 NLRP13Q86W25 1043 aa13.11□□□□□ -0.31
RPN2-207ENST00000462163 LMO7Q8WWI1 1683 aa13.11□□□□□ -0.31
RPN2-207ENST00000462163 NWD2Q9ULI1 1742 aa13.1□□□□□ -0.31
RPN2-207ENST00000462163 HAP1P54257 671 aaPredicted RBP13.1□□□□□ -0.31
RPN2-207ENST00000462163 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.1□□□□□ -0.31
RPN2-207ENST00000462163 CGNL1Q0VF96 1302 aa13.1□□□□□ -0.31
RPN2-207ENST00000462163 NSD2O96028 1365 aa13.09□□□□□ -0.31
RPN2-207ENST00000462163 ZNF316A6NFI3 1004 aaPredicted RBP13.09□□□□□ -0.31
RPN2-207ENST00000462163 FYB1O15117 783 aa13.09□□□□□ -0.31
RPN2-207ENST00000462163 ADAMTS2O95450 1211 aa13.09□□□□□ -0.31
RPN2-207ENST00000462163 GGNBP2Q9H3C7 697 aa13.09□□□□□ -0.31
RPN2-207ENST00000462163 COL18A1P39060 1754 aa13.09□□□□□ -0.31
RPN2-207ENST00000462163 ABCC6O95255 1503 aa13.08□□□□□ -0.32
RPN2-207ENST00000462163 KIAA0232Q92628 1395 aa13.07□□□□□ -0.32
RPN2-207ENST00000462163 RGPD5Q99666 1765 aa13.07□□□□□ -0.32
RPN2-207ENST00000462163 SOX12O15370 315 aa13.07□□□□□ -0.32
RPN2-207ENST00000462163 PER1O15534 1290 aaPredicted RBP13.07□□□□□ -0.32
RPN2-207ENST00000462163 MEX3CQ5U5Q3 659 aaKnown RBP13.07□□□□□ -0.32
RPN2-207ENST00000462163 COG3Q96JB2 828 aa13.07□□□□□ -0.32
RPN2-207ENST00000462163 KNSTRNQ9Y448 316 aa13.07□□□□□ -0.32
RPN2-207ENST00000462163 PEAK1Q9H792 1746 aa13.07□□□□□ -0.32
RPN2-207ENST00000462163 CPDO75976 1380 aa13.07□□□□□ -0.32
RPN2-207ENST00000462163 GCP02774 474 aa13.06□□□□□ -0.32
RPN2-207ENST00000462163 AMER1Q5JTC6 1135 aaPredicted RBP13.06□□□□□ -0.32
RPN2-207ENST00000462163 SLIT2O94813 1529 aa13.05□□□□□ -0.32
RPN2-207ENST00000462163 DDX10Q13206 875 aaKnown RBP13.05□□□□□ -0.32
RPN2-207ENST00000462163 KCNH5Q8NCM2 988 aa13.05□□□□□ -0.32
RPN2-207ENST00000462163 C8orf37Q96NL8 207 aa13.05□□□□□ -0.32
RPN2-207ENST00000462163 MAP2P11137 1827 aaKnown RBP13.04□□□□□ -0.32
RPN2-207ENST00000462163 ZC3H6P61129 1189 aaKnown RBP13.04□□□□□ -0.32
RPN2-207ENST00000462163 NPC1L1Q9UHC9 1359 aa13.04□□□□□ -0.32
RPN2-207ENST00000462163 CAMTA1Q9Y6Y1 1673 aa13.03□□□□□ -0.32
RPN2-207ENST00000462163 PRDM11Q9NQV5 511 aa13.03□□□□□ -0.32
RPN2-207ENST00000462163 ZBTB7CA1YPR0 619 aa13.02□□□□□ -0.33
RPN2-207ENST00000462163 CHRNA2Q15822 529 aa13.02□□□□□ -0.33
RPN2-207ENST00000462163 AFF2P51816 1311 aa13.02□□□□□ -0.33
RPN2-207ENST00000462163 SMG6Q86US8 1419 aaKnown RBP13.02□□□□□ -0.33
RPN2-207ENST00000462163 COL5A2P05997 1499 aaPredicted RBP13.02□□□□□ -0.33
RPN2-207ENST00000462163 FAM208AQ9UK61 1670 aaKnown RBP13.02□□□□□ -0.33
RPN2-207ENST00000462163 FBLN1P23142 703 aa13.01□□□□□ -0.33
RPN2-207ENST00000462163 CC2D1BQ5T0F9 858 aaKnown RBP13.01□□□□□ -0.33
RPN2-207ENST00000462163 ARHGEF25Q86VW2 580 aa13.01□□□□□ -0.33
RPN2-207ENST00000462163 NGLY1Q96IV0 654 aa13.01□□□□□ -0.33
RPN2-207ENST00000462163 AATKQ6ZMQ8 1374 aa13.01□□□□□ -0.33
RPN2-207ENST00000462163 BCL9LQ86UU0 1499 aa13.01□□□□□ -0.33
RPN2-207ENST00000462163 WNK3Q9BYP7 1800 aa13.01□□□□□ -0.33
RPN2-207ENST00000462163 RTL1A6NKG5 1358 aa13□□□□□ -0.33
RPN2-207ENST00000462163 MAP3K19Q56UN5 1328 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms