RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 PLEKHG5O94827 1062 aa18.88■□□□□ 0.61
C9orf3-210ENST00000462125 ITSN1Q15811 1721 aa18.88■□□□□ 0.61
C9orf3-210ENST00000462125 TONSLQ96HA7 1378 aa18.87■□□□□ 0.61
C9orf3-210ENST00000462125 EVC2Q86UK5 1308 aa18.86■□□□□ 0.61
C9orf3-210ENST00000462125 VPS72Q15906 364 aa18.86■□□□□ 0.61
C9orf3-210ENST00000462125 CABP1Q9NZU7 370 aa18.85■□□□□ 0.61
C9orf3-210ENST00000462125 TOPAZ1Q8N9V7 1692 aa18.85■□□□□ 0.61
C9orf3-210ENST00000462125 PPIP5K1Q6PFW1 1433 aa18.84■□□□□ 0.61
C9orf3-210ENST00000462125 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.84■□□□□ 0.61
C9orf3-210ENST00000462125 ONECUT3O60422 494 aaPredicted RBP18.84■□□□□ 0.61
C9orf3-210ENST00000462125 BRD4O60885 1362 aaPredicted RBP18.83■□□□□ 0.61
C9orf3-210ENST00000462125 QRICH2Q9H0J4 1663 aa18.83■□□□□ 0.61
C9orf3-210ENST00000462125 CARD11Q9BXL7 1154 aa18.83■□□□□ 0.6
C9orf3-210ENST00000462125 ABCA3Q99758 1704 aa18.83■□□□□ 0.6
C9orf3-210ENST00000462125 ABTB2Q8N961 1025 aa18.82■□□□□ 0.6
C9orf3-210ENST00000462125 RALGAPBQ86X10 1494 aa18.82■□□□□ 0.6
C9orf3-210ENST00000462125 BTG4Q9NY30 223 aa18.81■□□□□ 0.6
C9orf3-210ENST00000462125 SBNO2Q9Y2G9 1366 aa18.81■□□□□ 0.6
C9orf3-210ENST00000462125 NWD2Q9ULI1 1742 aa18.8■□□□□ 0.6
C9orf3-210ENST00000462125 NUTM2GQ5VZR2 741 aa18.79■□□□□ 0.6
C9orf3-210ENST00000462125 ZNF692Q9BU19 519 aaPredicted RBP18.79■□□□□ 0.6
C9orf3-210ENST00000462125 GLI3P10071 1580 aa18.79■□□□□ 0.6
C9orf3-210ENST00000462125 ATAD2Q6PL18 1390 aa18.79■□□□□ 0.6
C9orf3-210ENST00000462125 CRYBG1Q9Y4K1 1723 aa18.78■□□□□ 0.6
C9orf3-210ENST00000462125 NLRP13Q86W25 1043 aa18.78■□□□□ 0.6
C9orf3-210ENST00000462125 PRDM11Q9NQV5 511 aa18.78■□□□□ 0.6
C9orf3-210ENST00000462125 SSH2Q76I76 1423 aa18.77■□□□□ 0.6
C9orf3-210ENST00000462125 KIAA0232Q92628 1395 aa18.77■□□□□ 0.6
C9orf3-210ENST00000462125 USP19O94966 1318 aa18.76■□□□□ 0.59
C9orf3-210ENST00000462125 PLCH1Q4KWH8 1693 aa18.76■□□□□ 0.59
C9orf3-210ENST00000462125 USP6P35125 1406 aa18.76■□□□□ 0.59
C9orf3-210ENST00000462125 SEPT12Q8IYM1 358 aa18.76■□□□□ 0.59
C9orf3-210ENST00000462125 CCDC9Q9Y3X0 531 aaKnown RBP18.76■□□□□ 0.59
C9orf3-210ENST00000462125 COL14A1Q05707 1796 aaKnown RBP18.76■□□□□ 0.59
C9orf3-210ENST00000462125 GCP02774 474 aa18.75■□□□□ 0.59
C9orf3-210ENST00000462125 ZC3H6P61129 1189 aaKnown RBP18.75■□□□□ 0.59
C9orf3-210ENST00000462125 CCDC125Q86Z20 511 aa18.74■□□□□ 0.59
C9orf3-210ENST00000462125 PUS7Q96PZ0 661 aaKnown RBP18.74■□□□□ 0.59
C9orf3-210ENST00000462125 CPDO75976 1380 aa18.73■□□□□ 0.59
C9orf3-210ENST00000462125 CHRNA2Q15822 529 aa18.73■□□□□ 0.59
C9orf3-210ENST00000462125 TIMELESSQ9UNS1 1208 aa18.73■□□□□ 0.59
C9orf3-210ENST00000462125 SPATA31A5Q5VU36 1347 aa18.73■□□□□ 0.59
C9orf3-210ENST00000462125 SPATA31A7Q8IWB4 1347 aa18.73■□□□□ 0.59
C9orf3-210ENST00000462125 NLRP6P59044 892 aa18.72■□□□□ 0.59
C9orf3-210ENST00000462125 CPSF1Q10570 1443 aaKnown RBP18.72■□□□□ 0.59
C9orf3-210ENST00000462125 CLSPNQ9HAW4 1339 aa18.72■□□□□ 0.59
C9orf3-210ENST00000462125 NRAPQ86VF7 1730 aa18.71■□□□□ 0.59
C9orf3-210ENST00000462125 TTC21BQ7Z4L5 1316 aa18.71■□□□□ 0.59
C9orf3-210ENST00000462125 PHRF1Q9P1Y6 1649 aaKnown RBP18.71■□□□□ 0.58
C9orf3-210ENST00000462125 SLC24A1O60721 1099 aa18.7■□□□□ 0.58
C9orf3-210ENST00000462125 TESK2Q96S53 571 aa18.7■□□□□ 0.58
C9orf3-210ENST00000462125 ST20-MTHFSA0A0A6YYL1 179 aa18.69■□□□□ 0.58
C9orf3-210ENST00000462125 FAM98CQ17RN3 349 aaKnown RBP18.69■□□□□ 0.58
C9orf3-210ENST00000462125 EP400Q96L91 3159 aa18.69■□□□□ 0.58
C9orf3-210ENST00000462125 KRT27Q7Z3Y8 459 aa18.68■□□□□ 0.58
C9orf3-210ENST00000462125 SPATA31A1Q5TZJ5 1347 aa18.68■□□□□ 0.58
C9orf3-210ENST00000462125 TTC21AQ8NDW8 1320 aa18.68■□□□□ 0.58
C9orf3-210ENST00000462125 EVA1CP58658 441 aa18.67■□□□□ 0.58
C9orf3-210ENST00000462125 PCGF6Q9BYE7 350 aa18.67■□□□□ 0.58
C9orf3-210ENST00000462125 NRKQ7Z2Y5 1582 aa18.67■□□□□ 0.58
C9orf3-210ENST00000462125 SLC12A5Q9H2X9 1139 aa18.66■□□□□ 0.58
C9orf3-210ENST00000462125 STRN4Q9NRL3 753 aa18.66■□□□□ 0.58
C9orf3-210ENST00000462125 CAMTA1Q9Y6Y1 1673 aa18.66■□□□□ 0.58
C9orf3-210ENST00000462125 KTN1Q86UP2 1357 aaKnown RBP18.66■□□□□ 0.58
C9orf3-210ENST00000462125 SLIT3O75094 1523 aa18.64■□□□□ 0.58
C9orf3-210ENST00000462125 KCNH5Q8NCM2 988 aa18.64■□□□□ 0.57
C9orf3-210ENST00000462125 AATKQ6ZMQ8 1374 aa18.64■□□□□ 0.57
C9orf3-210ENST00000462125 CD163L1Q9NR16 1453 aa18.64■□□□□ 0.57
C9orf3-210ENST00000462125 BRWD3Q6RI45 1802 aa18.63■□□□□ 0.57
C9orf3-210ENST00000462125 LARP1Q6PKG0 1096 aaKnown RBP18.63■□□□□ 0.57
C9orf3-210ENST00000462125 BARGINQ6ZT62 677 aa18.63■□□□□ 0.57
C9orf3-210ENST00000462125 TMC1Q8TDI8 760 aa18.63■□□□□ 0.57
C9orf3-210ENST00000462125 A0A0G2JS52 829 aa18.62■□□□□ 0.57
C9orf3-210ENST00000462125 MYT1Q01538 1121 aa18.62■□□□□ 0.57
C9orf3-210ENST00000462125 HDGFL2Q7Z4V5 671 aaPredicted RBP18.62■□□□□ 0.57
C9orf3-210ENST00000462125 ARHGEF25Q86VW2 580 aa18.62■□□□□ 0.57
C9orf3-210ENST00000462125 BLMP54132 1417 aaPredicted RBP18.62■□□□□ 0.57
C9orf3-210ENST00000462125 LMO7Q8WWI1 1683 aa18.62■□□□□ 0.57
C9orf3-210ENST00000462125 AKAP12Q02952 1782 aa18.62■□□□□ 0.57
C9orf3-210ENST00000462125 PIK3C2AO00443 1686 aa18.61■□□□□ 0.57
C9orf3-210ENST00000462125 USP31Q70CQ4 1352 aa18.61■□□□□ 0.57
C9orf3-210ENST00000462125 TERF2IPQ9NYB0 399 aa18.61■□□□□ 0.57
C9orf3-210ENST00000462125 THRAP3Q9Y2W1 955 aaKnown RBP18.6■□□□□ 0.57
C9orf3-210ENST00000462125 TCP11L2Q8N4U5 519 aa18.59■□□□□ 0.57
C9orf3-210ENST00000462125 USP35Q9P2H5 1018 aa18.59■□□□□ 0.57
C9orf3-210ENST00000462125 AXIN2Q9Y2T1 843 aa18.59■□□□□ 0.57
C9orf3-210ENST00000462125 COL5A2P05997 1499 aaPredicted RBP18.58■□□□□ 0.57
C9orf3-210ENST00000462125 NINLQ9Y2I6 1382 aa18.58■□□□□ 0.57
C9orf3-210ENST00000462125 THSD7AQ9UPZ6 1657 aa18.58■□□□□ 0.57
C9orf3-210ENST00000462125 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.58■□□□□ 0.562e-6■□□□□ 9.3
C9orf3-210ENST00000462125 ZRANB1Q9UGI0 708 aa18.58■□□□□ 0.56
C9orf3-210ENST00000462125 USP47Q96K76 1375 aa18.57■□□□□ 0.56
C9orf3-210ENST00000462125 TMF1P82094 1093 aa18.56■□□□□ 0.56
C9orf3-210ENST00000462125 NME9Q86XW9 330 aa18.56■□□□□ 0.56
C9orf3-210ENST00000462125 MON2Q7Z3U7 1717 aa18.56■□□□□ 0.56
C9orf3-210ENST00000462125 EDC4Q6P2E9 1401 aaKnown RBP18.56■□□□□ 0.56
C9orf3-210ENST00000462125 A0A1W2PP64 1363 aa18.55■□□□□ 0.56
C9orf3-210ENST00000462125 ZBTB7CA1YPR0 619 aa18.55■□□□□ 0.56
C9orf3-210ENST00000462125 SF3B2Q13435 895 aaKnown RBP18.55■□□□□ 0.56
C9orf3-210ENST00000462125 FAM182BQ5T319 152 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms