RNA–Protein interactions for RNA: ENST00000461762.5

C9orf78-204, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-204ENST00000461762 TRIM27P14373 513 aa19.21■□□□□ 0.67
C9orf78-204ENST00000461762 SSH1Q8WYL5 1049 aa19.21■□□□□ 0.67
C9orf78-204ENST00000461762 U2SURPO15042 1029 aaKnown RBP19.2■□□□□ 0.66
C9orf78-204ENST00000461762 SRPK2P78362 688 aaKnown RBP19.2■□□□□ 0.66
C9orf78-204ENST00000461762 RTN4Q9NQC3 1192 aaKnown RBP19.2■□□□□ 0.66
C9orf78-204ENST00000461762 SMC4Q9NTJ3 1288 aa19.2■□□□□ 0.66
C9orf78-204ENST00000461762 MED14O60244 1454 aa19.2■□□□□ 0.66
C9orf78-204ENST00000461762 STK26Q9P289 416 aa19.2■□□□□ 0.66
C9orf78-204ENST00000461762 ATAD2Q6PL18 1390 aa19.19■□□□□ 0.66
C9orf78-204ENST00000461762 TBC1D2Q9BYX2 928 aa19.19■□□□□ 0.66
C9orf78-204ENST00000461762 TERF2IPQ9NYB0 399 aa19.19■□□□□ 0.66
C9orf78-204ENST00000461762 CD163L1Q9NR16 1453 aa19.18■□□□□ 0.66
C9orf78-204ENST00000461762 ATF7IPQ6VMQ6 1270 aa19.18■□□□□ 0.66
C9orf78-204ENST00000461762 PTPRMP28827 1452 aa19.18■□□□□ 0.66
C9orf78-204ENST00000461762 DDX19BQ9UMR2 479 aa19.18■□□□□ 0.66
C9orf78-204ENST00000461762 PNPLA6Q8IY17 1366 aa19.18■□□□□ 0.66
C9orf78-204ENST00000461762 SLKQ9H2G2 1235 aaPredicted RBP19.17■□□□□ 0.66
C9orf78-204ENST00000461762 NOB1Q9ULX3 412 aaKnown RBP19.16■□□□□ 0.66
C9orf78-204ENST00000461762 RIPK4P57078 832 aa19.15■□□□□ 0.66
C9orf78-204ENST00000461762 SMC5Q8IY18 1101 aa19.15■□□□□ 0.66
C9orf78-204ENST00000461762 PRAM1Q96QH2 718 aa19.15■□□□□ 0.66
C9orf78-204ENST00000461762 MINK1Q8N4C8 1332 aaPredicted RBP19.14■□□□□ 0.65
C9orf78-204ENST00000461762 DIAPH1O60610 1272 aaKnown RBP19.14■□□□□ 0.65
C9orf78-204ENST00000461762 ZBTB40Q9NUA8 1239 aa19.14■□□□□ 0.65
C9orf78-204ENST00000461762 ITPRIPQ8IWB1 547 aa19.13■□□□□ 0.65
C9orf78-204ENST00000461762 PNNQ9H307 717 aaKnown RBP19.13■□□□□ 0.65
C9orf78-204ENST00000461762 YTHDC2Q9H6S0 1430 aaKnown RBP19.13■□□□□ 0.65
C9orf78-204ENST00000461762 POGKQ9P215 609 aa19.13■□□□□ 0.65
C9orf78-204ENST00000461762 TMEM57Q8N5G2 664 aa19.12■□□□□ 0.65
C9orf78-204ENST00000461762 TMEM131LA2VDJ0 1609 aa19.11■□□□□ 0.65
C9orf78-204ENST00000461762 FCHSD2O94868 740 aa19.11■□□□□ 0.65
C9orf78-204ENST00000461762 ALDH1L2Q3SY69 923 aa19.11■□□□□ 0.65
C9orf78-204ENST00000461762 HDGFL2Q7Z4V5 671 aaPredicted RBP19.11■□□□□ 0.65
C9orf78-204ENST00000461762 C22orf23Q9BZE7 217 aa19.11■□□□□ 0.65
C9orf78-204ENST00000461762 CLTCQ00610 1675 aaKnown RBP19.1■□□□□ 0.65
C9orf78-204ENST00000461762 IPO8O15397 1037 aaKnown RBP19.1■□□□□ 0.65
C9orf78-204ENST00000461762 KIF16BQ96L93 1317 aa19.1■□□□□ 0.65
C9orf78-204ENST00000461762 CDK19Q9BWU1 502 aa19.1■□□□□ 0.65
C9orf78-204ENST00000461762 ANKRD26Q9UPS8 1709 aa19.09■□□□□ 0.65
C9orf78-204ENST00000461762 YEATS2Q9ULM3 1422 aa19.09■□□□□ 0.65
C9orf78-204ENST00000461762 BRPF1P55201 1214 aaPredicted RBP19.09■□□□□ 0.65
C9orf78-204ENST00000461762 ARHGEF40Q8TER5 1519 aa19.09■□□□□ 0.65
C9orf78-204ENST00000461762 PREX1Q8TCU6 1659 aa19.09■□□□□ 0.65
C9orf78-204ENST00000461762 SENP3Q9H4L4 574 aaPredicted RBP19.08■□□□□ 0.65
C9orf78-204ENST00000461762 CABP1Q9NZU7 370 aa19.08■□□□□ 0.64
C9orf78-204ENST00000461762 MFAP1P55081 439 aaKnown RBP19.06■□□□□ 0.64
C9orf78-204ENST00000461762 NUCB1Q02818 461 aa19.06■□□□□ 0.64
C9orf78-204ENST00000461762 ZNF428Q96B54 188 aa19.06■□□□□ 0.64
C9orf78-204ENST00000461762 RSPH6AQ9H0K4 717 aa19.06■□□□□ 0.64
C9orf78-204ENST00000461762 CDC42BPGQ6DT37 1551 aa19.06■□□□□ 0.64
C9orf78-204ENST00000461762 ANO8Q9HCE9 1232 aaPredicted RBP19.05■□□□□ 0.64
C9orf78-204ENST00000461762 REREQ9P2R6 1566 aa19.05■□□□□ 0.64
C9orf78-204ENST00000461762 POLKQ9UBT6 870 aa19.05■□□□□ 0.64
C9orf78-204ENST00000461762 ALKQ9UM73 1620 aa19.04■□□□□ 0.64
C9orf78-204ENST00000461762 PPIP5K1Q6PFW1 1433 aa19.04■□□□□ 0.64
C9orf78-204ENST00000461762 MYO5BQ9ULV0 1848 aa19.04■□□□□ 0.64
C9orf78-204ENST00000461762 FAM135BQ49AJ0 1406 aa19.04■□□□□ 0.64
C9orf78-204ENST00000461762 FBXO31Q5XUX0 539 aaPredicted RBP19.03■□□□□ 0.64
C9orf78-204ENST00000461762 PRKAR2BP31323 418 aa19.03■□□□□ 0.64
C9orf78-204ENST00000461762 MCM4P33991 863 aa19.02■□□□□ 0.64
C9orf78-204ENST00000461762 CHMP5Q9NZZ3 219 aa19.02■□□□□ 0.64
C9orf78-204ENST00000461762 PPP6R1Q9UPN7 881 aa19.01■□□□□ 0.63
C9orf78-204ENST00000461762 RBM25P49756 843 aaKnown RBP19.01■□□□□ 0.63
C9orf78-204ENST00000461762 AGLP35573 1532 aa19.01■□□□□ 0.63
C9orf78-204ENST00000461762 LRRC7Q96NW7 1537 aa19.01■□□□□ 0.63
C9orf78-204ENST00000461762 ZBTB7BO15156 539 aaPredicted RBP19■□□□□ 0.63
C9orf78-204ENST00000461762 VAMP4O75379 141 aa19■□□□□ 0.63
C9orf78-204ENST00000461762 CHD1LQ86WJ1 897 aa19■□□□□ 0.63
C9orf78-204ENST00000461762 SPRYD3Q8NCJ5 442 aa19■□□□□ 0.63
C9orf78-204ENST00000461762 ARHGAP45Q92619 1136 aa19■□□□□ 0.63
C9orf78-204ENST00000461762 FBLN1P23142 703 aa19■□□□□ 0.63
C9orf78-204ENST00000461762 NFE2L2Q16236 605 aa19■□□□□ 0.63
C9orf78-204ENST00000461762 PHACTR3Q96KR7 559 aa19■□□□□ 0.63
C9orf78-204ENST00000461762 L1TD1Q5T7N2 865 aaKnown RBP18.99■□□□□ 0.63
C9orf78-204ENST00000461762 FAM43AQ8N2R8 423 aa18.99■□□□□ 0.63
C9orf78-204ENST00000461762 MRPL50Q8N5N7 158 aaKnown RBP18.99■□□□□ 0.63
C9orf78-204ENST00000461762 PIK3R4Q99570 1358 aa18.99■□□□□ 0.63
C9orf78-204ENST00000461762 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.98■□□□□ 0.63
C9orf78-204ENST00000461762 ZNF692Q9BU19 519 aaPredicted RBP18.98■□□□□ 0.63
C9orf78-204ENST00000461762 LNPKQ9C0E8 428 aa18.98■□□□□ 0.63
C9orf78-204ENST00000461762 ATP7BP35670 1465 aa18.98■□□□□ 0.63
C9orf78-204ENST00000461762 DIP2BQ9P265 1576 aa18.97■□□□□ 0.63
C9orf78-204ENST00000461762 DLC1Q96QB1 1528 aa18.97■□□□□ 0.63
C9orf78-204ENST00000461762 ZNF853P0CG23 659 aa18.97■□□□□ 0.63
C9orf78-204ENST00000461762 SNX21Q969T3 373 aa18.97■□□□□ 0.63
C9orf78-204ENST00000461762 DDIT3P35638 169 aa18.97■□□□□ 0.63
C9orf78-204ENST00000461762 CALD1Q05682 793 aaKnown RBP18.97■□□□□ 0.63
C9orf78-204ENST00000461762 KIF20BQ96Q89 1820 aa18.97■□□□□ 0.63
C9orf78-204ENST00000461762 IL13P35225 146 aa18.96■□□□□ 0.63
C9orf78-204ENST00000461762 BMP2KLQ5H9B9 411 aa18.96■□□□□ 0.63
C9orf78-204ENST00000461762 WAPLQ7Z5K2 1190 aa18.96■□□□□ 0.63
C9orf78-204ENST00000461762 CHMP4BQ9H444 224 aaKnown RBP18.96■□□□□ 0.63
C9orf78-204ENST00000461762 HSCBQ8IWL3 235 aa18.96■□□□□ 0.63
C9orf78-204ENST00000461762 GCC1Q96CN9 775 aa18.96■□□□□ 0.63
C9orf78-204ENST00000461762 IFT57Q9NWB7 429 aa18.96■□□□□ 0.63
C9orf78-204ENST00000461762 PTCH1Q13635 1447 aa18.95■□□□□ 0.62
C9orf78-204ENST00000461762 NCOA3Q9Y6Q9 1424 aa18.95■□□□□ 0.62
C9orf78-204ENST00000461762 FSD2A1L4K1 749 aa18.95■□□□□ 0.62
C9orf78-204ENST00000461762 TSPYL6Q8N831 410 aa18.95■□□□□ 0.62
C9orf78-204ENST00000461762 GNAI1P63096 354 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms