RNA–Protein interactions for RNA: ENST00000461739.1

ARHGAP4-215, Transcript of Rho GTPase activating protein 4, human

TSL 3

Gene ARHGAP4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP4-215	ENST00000461739	TMC1	Q8TDI8	760 aa		29.12	■■■□□ 2.25
ARHGAP4-215	ENST00000461739	ABCA3	Q99758	1704 aa		29.11	■■■□□ 2.25
ARHGAP4-215	ENST00000461739	CD163L1	Q9NR16	1453 aa		29.11	■■■□□ 2.25
ARHGAP4-215	ENST00000461739	LMOD2	Q6P5Q4	547 aa		29.11	■■■□□ 2.25
ARHGAP4-215	ENST00000461739	NRK	Q7Z2Y5	1582 aa		29.1	■■■□□ 2.25
ARHGAP4-215	ENST00000461739	SLC12A5	Q9H2X9	1139 aa		29.1	■■■□□ 2.25
ARHGAP4-215	ENST00000461739	SSH2	Q76I76	1423 aa		29.1	■■■□□ 2.25
ARHGAP4-215	ENST00000461739	MARF1	Q9Y4F3	1742 aa	Known RBP	29.09	■■■□□ 2.25
ARHGAP4-215	ENST00000461739	CRYBG1	Q9Y4K1	1723 aa		29.08	■■■□□ 2.25
ARHGAP4-215	ENST00000461739	KTN1	Q86UP2	1357 aa	Known RBP	29.07	■■■□□ 2.24
ARHGAP4-215	ENST00000461739	TERF2IP	Q9NYB0	399 aa		29.07	■■■□□ 2.24
ARHGAP4-215	ENST00000461739	MYOM1	P52179	1685 aa		29.06	■■■□□ 2.24
ARHGAP4-215	ENST00000461739	MEX3C	Q5U5Q3	659 aa	Known RBP	29.06	■■■□□ 2.24
ARHGAP4-215	ENST00000461739	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	29.06	■■■□□ 2.24
ARHGAP4-215	ENST00000461739		A0A1W2PP64	1363 aa		29.03	■■■□□ 2.24
ARHGAP4-215	ENST00000461739	PHF23	Q9BUL5	403 aa	Predicted RBP	29.03	■■■□□ 2.24
ARHGAP4-215	ENST00000461739	PIK3C2A	O00443	1686 aa		29.02	■■■□□ 2.24
ARHGAP4-215	ENST00000461739	TTC21B	Q7Z4L5	1316 aa		29.02	■■■□□ 2.24
ARHGAP4-215	ENST00000461739	TTC21A	Q8NDW8	1320 aa		29.02	■■■□□ 2.24
ARHGAP4-215	ENST00000461739	ABTB2	Q8N961	1025 aa		29.02	■■■□□ 2.24
ARHGAP4-215	ENST00000461739	PHRF1	Q9P1Y6	1649 aa	Known RBP	29.01	■■■□□ 2.23
ARHGAP4-215	ENST00000461739	ANKRD36B	Q8N2N9	1353 aa		29.01	■■■□□ 2.23
ARHGAP4-215	ENST00000461739	ADAMTS2	O95450	1211 aa		29	■■■□□ 2.23
ARHGAP4-215	ENST00000461739	CABLES1	Q8TDN4	633 aa		29	■■■□□ 2.23
ARHGAP4-215	ENST00000461739	EDC4	Q6P2E9	1401 aa	Known RBP	29	■■■□□ 2.23
ARHGAP4-215	ENST00000461739	HAP1	P54257	671 aa	Predicted RBP	28.99	■■■□□ 2.23
ARHGAP4-215	ENST00000461739	NLRP13	Q86W25	1043 aa		28.97	■■■□□ 2.23
ARHGAP4-215	ENST00000461739	ZEB1	P37275	1124 aa	Predicted RBP	28.96	■■■□□ 2.23
ARHGAP4-215	ENST00000461739	C8orf37	Q96NL8	207 aa		28.96	■■■□□ 2.23
ARHGAP4-215	ENST00000461739	USP19	O94966	1318 aa		28.95	■■■□□ 2.23
ARHGAP4-215	ENST00000461739	NUTM2G	Q5VZR2	741 aa		28.95	■■■□□ 2.22
ARHGAP4-215	ENST00000461739	USP54	Q70EL1	1684 aa		28.95	■■■□□ 2.22
ARHGAP4-215	ENST00000461739	PLEKHG5	O94827	1062 aa		28.94	■■■□□ 2.22
ARHGAP4-215	ENST00000461739	C11orf95	C9JLR9	678 aa	Predicted RBP	28.93	■■■□□ 2.22
ARHGAP4-215	ENST00000461739	NLRP6	P59044	892 aa		28.93	■■■□□ 2.22
ARHGAP4-215	ENST00000461739	RGS17	Q9UGC6	210 aa	Predicted RBP	28.93	■■■□□ 2.22
ARHGAP4-215	ENST00000461739	NGLY1	Q96IV0	654 aa		28.92	■■■□□ 2.22
ARHGAP4-215	ENST00000461739	SLIT3	O75094	1523 aa		28.92	■■■□□ 2.22
ARHGAP4-215	ENST00000461739	POLR3GL	Q9BT43	218 aa		28.91	■■■□□ 2.22
ARHGAP4-215	ENST00000461739	AFF2	P51816	1311 aa		28.91	■■■□□ 2.22
ARHGAP4-215	ENST00000461739	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	28.9	■■■□□ 2.22
ARHGAP4-215	ENST00000461739	USP31	Q70CQ4	1352 aa		28.89	■■■□□ 2.22
ARHGAP4-215	ENST00000461739	ZNF772	Q68DY9	489 aa	Predicted RBP	28.89	■■■□□ 2.22
ARHGAP4-215	ENST00000461739	FNBP4	Q8N3X1	1017 aa	Predicted RBP	28.89	■■■□□ 2.22
ARHGAP4-215	ENST00000461739	COL14A1	Q05707	1796 aa	Known RBP	28.88	■■■□□ 2.21
ARHGAP4-215	ENST00000461739	PLCH1	Q4KWH8	1693 aa		28.88	■■■□□ 2.21
ARHGAP4-215	ENST00000461739	NWD2	Q9ULI1	1742 aa		28.88	■■■□□ 2.21
ARHGAP4-215	ENST00000461739	KIF7	Q2M1P5	1343 aa		28.88	■■■□□ 2.21
ARHGAP4-215	ENST00000461739	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	28.86	■■■□□ 2.21
ARHGAP4-215	ENST00000461739	SLIT2	O94813	1529 aa		28.86	■■■□□ 2.21
ARHGAP4-215	ENST00000461739	GC	P02774	474 aa		28.85	■■■□□ 2.21
ARHGAP4-215	ENST00000461739	NME9	Q86XW9	330 aa		28.85	■■■□□ 2.21
ARHGAP4-215	ENST00000461739	KIF20B	Q96Q89	1820 aa		28.84	■■■□□ 2.21
ARHGAP4-215	ENST00000461739	CPD	O75976	1380 aa		28.83	■■■□□ 2.21
ARHGAP4-215	ENST00000461739	FAM83G	A6ND36	823 aa		28.82	■■■□□ 2.2
ARHGAP4-215	ENST00000461739	CARD14	Q9BXL6	1004 aa		28.82	■■■□□ 2.2
ARHGAP4-215	ENST00000461739	USP21	Q9UK80	565 aa		28.82	■■■□□ 2.2
ARHGAP4-215	ENST00000461739	KIAA0232	Q92628	1395 aa		28.82	■■■□□ 2.2
ARHGAP4-215	ENST00000461739	OVOS2	A0A0J9YW53	1432 aa		28.82	■■■□□ 2.2
ARHGAP4-215	ENST00000461739	OVOS2	Q6IE36	1432 aa		28.82	■■■□□ 2.2
ARHGAP4-215	ENST00000461739	BCL9L	Q86UU0	1499 aa		28.82	■■■□□ 2.2
ARHGAP4-215	ENST00000461739	NSD3	Q9BZ95	1437 aa		28.81	■■■□□ 2.2
ARHGAP4-215	ENST00000461739	POTEA	Q6S8J7	498 aa		28.81	■■■□□ 2.2
ARHGAP4-215	ENST00000461739	KCNH5	Q8NCM2	988 aa		28.81	■■■□□ 2.2
ARHGAP4-215	ENST00000461739	PRDM11	Q9NQV5	511 aa		28.81	■■■□□ 2.2
ARHGAP4-215	ENST00000461739	CCDC7	Q96M83	1385 aa		28.8	■■■□□ 2.2
ARHGAP4-215	ENST00000461739	ZRANB1	Q9UGI0	708 aa		28.8	■■■□□ 2.2
ARHGAP4-215	ENST00000461739	ZC3H6	P61129	1189 aa	Known RBP	28.79	■■■□□ 2.2
ARHGAP4-215	ENST00000461739	NFAT5	O94916	1531 aa		28.79	■■■□□ 2.2
ARHGAP4-215	ENST00000461739	NRAP	Q86VF7	1730 aa		28.78	■■■□□ 2.2
ARHGAP4-215	ENST00000461739	WASHC2A	Q641Q2	1341 aa		28.77	■■■□□ 2.2
ARHGAP4-215	ENST00000461739	FYB1	O15117	783 aa		28.76	■■■□□ 2.19
ARHGAP4-215	ENST00000461739	UNC5CL	Q8IV45	518 aa		28.76	■■■□□ 2.19
ARHGAP4-215	ENST00000461739	PANK3	Q9H999	370 aa		28.76	■■■□□ 2.19
ARHGAP4-215	ENST00000461739	LMO7	Q8WWI1	1683 aa		28.76	■■■□□ 2.19
ARHGAP4-215	ENST00000461739	QTRT2	Q9H974	415 aa	Known RBP	28.75	■■■□□ 2.19
ARHGAP4-215	ENST00000461739	TRPC5	Q9UL62	973 aa	Predicted RBP	28.75	■■■□□ 2.19
ARHGAP4-215	ENST00000461739	ATRN	O75882	1429 aa		28.75	■■■□□ 2.19
ARHGAP4-215	ENST00000461739	COG3	Q96JB2	828 aa		28.74	■■■□□ 2.19
ARHGAP4-215	ENST00000461739	BTG4	Q9NY30	223 aa		28.73	■■■□□ 2.19
ARHGAP4-215	ENST00000461739	COL18A1	P39060	1754 aa		28.73	■■■□□ 2.19
ARHGAP4-215	ENST00000461739	CGNL1	Q0VF96	1302 aa		28.72	■■■□□ 2.19
ARHGAP4-215	ENST00000461739	CHRNA2	Q15822	529 aa		28.72	■■■□□ 2.19
ARHGAP4-215	ENST00000461739	LTN1	O94822	1766 aa		28.71	■■■□□ 2.19
ARHGAP4-215	ENST00000461739	ARHGEF25	Q86VW2	580 aa		28.71	■■■□□ 2.19
ARHGAP4-215	ENST00000461739	AATK	Q6ZMQ8	1374 aa		28.71	■■■□□ 2.19
ARHGAP4-215	ENST00000461739	ABCC6	O95255	1503 aa		28.7	■■■□□ 2.19
ARHGAP4-215	ENST00000461739	ANKRD26	Q9UPS8	1709 aa		28.7	■■■□□ 2.19
ARHGAP4-215	ENST00000461739	GGNBP2	Q9H3C7	697 aa		28.7	■■■□□ 2.18
ARHGAP4-215	ENST00000461739	SOX12	O15370	315 aa		28.69	■■■□□ 2.18
ARHGAP4-215	ENST00000461739	CAMTA1	Q9Y6Y1	1673 aa		28.69	■■■□□ 2.18
ARHGAP4-215	ENST00000461739	RXRB	P28702	533 aa		28.68	■■■□□ 2.18
ARHGAP4-215	ENST00000461739	RBM6	P78332	1123 aa	Known RBP	28.68	■■■□□ 2.18
ARHGAP4-215	ENST00000461739	VPS72	Q15906	364 aa		28.67	■■■□□ 2.18
ARHGAP4-215	ENST00000461739	ILDR2	Q71H61	639 aa		28.67	■■■□□ 2.18
ARHGAP4-215	ENST00000461739	CDK12	Q9NYV4	1490 aa	Predicted RBP	28.65	■■■□□ 2.18
ARHGAP4-215	ENST00000461739	ZBTB7C	A1YPR0	619 aa		28.64	■■■□□ 2.18
ARHGAP4-215	ENST00000461739	RGPD5	Q99666	1765 aa		28.64	■■■□□ 2.18
ARHGAP4-215	ENST00000461739	NSD2	O96028	1365 aa		28.63	■■■□□ 2.17
ARHGAP4-215	ENST00000461739	GLI3	P10071	1580 aa		28.63	■■■□□ 2.17

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