RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 NRAPQ86VF7 1730 aa25.9■■□□□ 1.74
SSB-206ENST00000461708 POLR3AO14802 1390 aaPredicted RBP25.89■■□□□ 1.74
SSB-206ENST00000461708 BLMP54132 1417 aaPredicted RBP25.88■■□□□ 1.73
SSB-206ENST00000461708 SRCAPQ6ZRS2 3230 aa25.88■■□□□ 1.73
SSB-206ENST00000461708 CCDC61Q9Y6R9 512 aa25.88■■□□□ 1.73
SSB-206ENST00000461708 TOPAZ1Q8N9V7 1692 aa25.87■■□□□ 1.73
SSB-206ENST00000461708 BTG4Q9NY30 223 aa25.87■■□□□ 1.73
SSB-206ENST00000461708 CCDC9Q9Y3X0 531 aaKnown RBP25.87■■□□□ 1.73
SSB-206ENST00000461708 PLEKHG3A1L390 1219 aa25.86■■□□□ 1.73
SSB-206ENST00000461708 PAK3O75914 559 aaPredicted RBP25.86■■□□□ 1.73
SSB-206ENST00000461708 NBPF1Q3BBV0 1214 aa25.86■■□□□ 1.73
SSB-206ENST00000461708 KRT27Q7Z3Y8 459 aa25.83■■□□□ 1.73
SSB-206ENST00000461708 ZRANB1Q9UGI0 708 aa25.83■■□□□ 1.73
SSB-206ENST00000461708 NBPF8Q3BBV2 869 aa25.82■■□□□ 1.72
SSB-206ENST00000461708 ACEP12821 1306 aa25.82■■□□□ 1.72
SSB-206ENST00000461708 PRDM11Q9NQV5 511 aa25.81■■□□□ 1.72
SSB-206ENST00000461708 CENPJQ9HC77 1338 aaPredicted RBP25.81■■□□□ 1.72
SSB-206ENST00000461708 SPATA31A5Q5VU36 1347 aa25.8■■□□□ 1.72
SSB-206ENST00000461708 SPATA31A7Q8IWB4 1347 aa25.8■■□□□ 1.72
SSB-206ENST00000461708 PHRF1Q9P1Y6 1649 aaKnown RBP25.77■■□□□ 1.72
SSB-206ENST00000461708 FAM98CQ17RN3 349 aaKnown RBP25.77■■□□□ 1.72
SSB-206ENST00000461708 L3MBTL2Q969R5 705 aa25.77■■□□□ 1.72
SSB-206ENST00000461708 KIAA0232Q92628 1395 aa25.77■■□□□ 1.72
SSB-206ENST00000461708 SF3B2Q13435 895 aaKnown RBP25.76■■□□□ 1.71
SSB-206ENST00000461708 BRD4O60885 1362 aaPredicted RBP25.76■■□□□ 1.71
SSB-206ENST00000461708 SRPK2P78362 688 aaKnown RBP25.74■■□□□ 1.71
SSB-206ENST00000461708 QRICH2Q9H0J4 1663 aa25.74■■□□□ 1.71
SSB-206ENST00000461708 PPIP5K1Q6PFW1 1433 aa25.73■■□□□ 1.71
SSB-206ENST00000461708 THSD7AQ9UPZ6 1657 aa25.72■■□□□ 1.71
SSB-206ENST00000461708 A0A0G2JS52 829 aa25.72■■□□□ 1.71
SSB-206ENST00000461708 MYT1Q01538 1121 aa25.72■■□□□ 1.71
SSB-206ENST00000461708 CPDO75976 1380 aa25.71■■□□□ 1.71
SSB-206ENST00000461708 USP19O94966 1318 aa25.71■■□□□ 1.71
SSB-206ENST00000461708 ABTB2Q8N961 1025 aa25.71■■□□□ 1.71
SSB-206ENST00000461708 SPATA31A1Q5TZJ5 1347 aa25.7■■□□□ 1.71
SSB-206ENST00000461708 DEFB132Q7Z7B7 95 aa25.7■■□□□ 1.7
SSB-206ENST00000461708 TRPM1Q7Z4N2 1603 aa25.7■■□□□ 1.7
SSB-206ENST00000461708 ZC3H6P61129 1189 aaKnown RBP25.69■■□□□ 1.7
SSB-206ENST00000461708 CABP2Q9NPB3 220 aa25.69■■□□□ 1.7
SSB-206ENST00000461708 NRKQ7Z2Y5 1582 aa25.69■■□□□ 1.7
SSB-206ENST00000461708 CHRNA2Q15822 529 aa25.68■■□□□ 1.7
SSB-206ENST00000461708 NUTM2GQ5VZR2 741 aa25.68■■□□□ 1.7
SSB-206ENST00000461708 NLRP13Q86W25 1043 aa25.68■■□□□ 1.7
SSB-206ENST00000461708 SIN3AQ96ST3 1273 aa25.67■■□□□ 1.7
SSB-206ENST00000461708 EVC2Q86UK5 1308 aa25.64■■□□□ 1.7
SSB-206ENST00000461708 BAG6P46379 1132 aa25.64■■□□□ 1.7
SSB-206ENST00000461708 CABP1Q9NZU7 370 aa25.64■■□□□ 1.7
SSB-206ENST00000461708 LMO7Q8WWI1 1683 aa25.64■■□□□ 1.69
SSB-206ENST00000461708 USP6P35125 1406 aa25.63■■□□□ 1.69
SSB-206ENST00000461708 SSH2Q76I76 1423 aa25.63■■□□□ 1.69
SSB-206ENST00000461708 RGPD1P0DJD0 1748 aa25.63■■□□□ 1.69
SSB-206ENST00000461708 BARGINQ6ZT62 677 aa25.63■■□□□ 1.69
SSB-206ENST00000461708 STRN4Q9NRL3 753 aa25.63■■□□□ 1.69
SSB-206ENST00000461708 CAMTA1Q9Y6Y1 1673 aa25.63■■□□□ 1.69
SSB-206ENST00000461708 ROCK2O75116 1388 aaKnown RBP25.62■■□□□ 1.69
SSB-206ENST00000461708 GCP02774 474 aa25.62■■□□□ 1.69
SSB-206ENST00000461708 EVA1CP58658 441 aa25.61■■□□□ 1.69
SSB-206ENST00000461708 NEUROD1Q13562 356 aa25.6■■□□□ 1.69
SSB-206ENST00000461708 DISP2A7MBM2 1401 aa25.6■■□□□ 1.69
SSB-206ENST00000461708 FAM196AQ6ZSG2 479 aa25.57■■□□□ 1.68
SSB-206ENST00000461708 SLIT3O75094 1523 aa25.57■■□□□ 1.68
SSB-206ENST00000461708 NLRP6P59044 892 aa25.56■■□□□ 1.68
SSB-206ENST00000461708 FAM182BQ5T319 152 aa25.56■■□□□ 1.68
SSB-206ENST00000461708 LARP1Q6PKG0 1096 aaKnown RBP25.56■■□□□ 1.68
SSB-206ENST00000461708 TCP11L2Q8N4U5 519 aa25.56■■□□□ 1.68
SSB-206ENST00000461708 ZNF692Q9BU19 519 aaPredicted RBP25.56■■□□□ 1.68
SSB-206ENST00000461708 THRAP3Q9Y2W1 955 aaKnown RBP25.56■■□□□ 1.68
SSB-206ENST00000461708 AATKQ6ZMQ8 1374 aa25.55■■□□□ 1.68
SSB-206ENST00000461708 TNS1Q9HBL0 1735 aaKnown RBP25.54■■□□□ 1.68
SSB-206ENST00000461708 SBNO2Q9Y2G9 1366 aa25.54■■□□□ 1.68
SSB-206ENST00000461708 COL5A2P05997 1499 aaPredicted RBP25.53■■□□□ 1.68
SSB-206ENST00000461708 USP35Q9P2H5 1018 aa25.53■■□□□ 1.68
SSB-206ENST00000461708 PIK3C2AO00443 1686 aa25.52■■□□□ 1.68
SSB-206ENST00000461708 AKAP12Q02952 1782 aa25.51■■□□□ 1.67
SSB-206ENST00000461708 EN1Q05925 392 aaPredicted RBP25.51■■□□□ 1.67
SSB-206ENST00000461708 PDE3BQ13370 1112 aa25.5■■□□□ 1.67
SSB-206ENST00000461708 CRB1P82279 1406 aa25.49■■□□□ 1.67
SSB-206ENST00000461708 CPSF1Q10570 1443 aaKnown RBP25.49■■□□□ 1.67
SSB-206ENST00000461708 PARD3Q8TEW0 1356 aa25.49■■□□□ 1.67
SSB-206ENST00000461708 TTC21AQ8NDW8 1320 aa25.49■■□□□ 1.67
SSB-206ENST00000461708 LRP5O75197 1615 aa25.48■■□□□ 1.67
SSB-206ENST00000461708 TTC21BQ7Z4L5 1316 aa25.48■■□□□ 1.67
SSB-206ENST00000461708 PARP4Q9UKK3 1724 aaKnown RBP25.48■■□□□ 1.67
SSB-206ENST00000461708 COL18A1P39060 1754 aa25.47■■□□□ 1.67
SSB-206ENST00000461708 C11orf95C9JLR9 678 aaPredicted RBP25.47■■□□□ 1.67
SSB-206ENST00000461708 TRIM37O94972 964 aa25.46■■□□□ 1.67
SSB-206ENST00000461708 KCNH5Q8NCM2 988 aa25.46■■□□□ 1.67
SSB-206ENST00000461708 CAMKK2Q96RR4 588 aa25.45■■□□□ 1.66
SSB-206ENST00000461708 ARHGEF25Q86VW2 580 aa25.43■■□□□ 1.66
SSB-206ENST00000461708 CARD11Q9BXL7 1154 aa25.43■■□□□ 1.66
SSB-206ENST00000461708 KTN1Q86UP2 1357 aaKnown RBP25.43■■□□□ 1.66
SSB-206ENST00000461708 MON2Q7Z3U7 1717 aa25.41■■□□□ 1.66
SSB-206ENST00000461708 PSDA5PKW4 1024 aaPredicted RBP25.41■■□□□ 1.66
SSB-206ENST00000461708 APBA3O96018 575 aa25.41■■□□□ 1.66
SSB-206ENST00000461708 EZH2Q15910 746 aaKnown RBP25.41■■□□□ 1.66
SSB-206ENST00000461708 TONSLQ96HA7 1378 aa25.41■■□□□ 1.66
SSB-206ENST00000461708 WDR17Q8IZU2 1322 aa25.4■■□□□ 1.66
SSB-206ENST00000461708 ABCC6O95255 1503 aa25.39■■□□□ 1.66
SSB-206ENST00000461708 ZBTB7CA1YPR0 619 aa25.39■■□□□ 1.66
SSB-206ENST00000461708 AXIN2Q9Y2T1 843 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms