RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 MSH5O43196 834 aa15.65■□□□□ 0.1
SSBP1-202ENST00000461433 LRRC59Q96AG4 307 aaKnown RBP15.65■□□□□ 0.1
SSBP1-202ENST00000461433 TERF2IPQ9NYB0 399 aa15.65■□□□□ 0.1
SSBP1-202ENST00000461433 KTN1Q86UP2 1357 aaKnown RBP15.65■□□□□ 0.1
SSBP1-202ENST00000461433 SPATA31A3Q5VYP0 1347 aa15.65■□□□□ 0.1
SSBP1-202ENST00000461433 HDGFL2Q7Z4V5 671 aaPredicted RBP15.63■□□□□ 0.09
SSBP1-202ENST00000461433 BRD4O60885 1362 aaPredicted RBP15.63■□□□□ 0.09
SSBP1-202ENST00000461433 SHPRHQ149N8 1683 aa15.63■□□□□ 0.09
SSBP1-202ENST00000461433 TNS3Q68CZ2 1445 aa15.63■□□□□ 0.09
SSBP1-202ENST00000461433 CARD14Q9BXL6 1004 aa15.63■□□□□ 0.09
SSBP1-202ENST00000461433 PNPLA6Q8IY17 1366 aa15.62■□□□□ 0.09
SSBP1-202ENST00000461433 COL22A1Q8NFW1 1626 aaPredicted RBP15.62■□□□□ 0.09
SSBP1-202ENST00000461433 TTC21BQ7Z4L5 1316 aa15.62■□□□□ 0.09
SSBP1-202ENST00000461433 PAK3O75914 559 aaPredicted RBP15.61■□□□□ 0.09
SSBP1-202ENST00000461433 EDC4Q6P2E9 1401 aaKnown RBP15.61■□□□□ 0.09
SSBP1-202ENST00000461433 PIK3C2AO00443 1686 aa15.61■□□□□ 0.09
SSBP1-202ENST00000461433 JCADQ9P266 1359 aa15.61■□□□□ 0.09
SSBP1-202ENST00000461433 PANK3Q9H999 370 aa15.6■□□□□ 0.09
SSBP1-202ENST00000461433 MARF1Q9Y4F3 1742 aaKnown RBP15.59■□□□□ 0.09
SSBP1-202ENST00000461433 CRYBG1Q9Y4K1 1723 aa15.59■□□□□ 0.09
SSBP1-202ENST00000461433 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.58■□□□□ 0.08
SSBP1-202ENST00000461433 TTC21AQ8NDW8 1320 aa15.58■□□□□ 0.08
SSBP1-202ENST00000461433 ARHGEF10O15013 1369 aa15.58■□□□□ 0.08
SSBP1-202ENST00000461433 LMOD2Q6P5Q4 547 aa15.57■□□□□ 0.08
SSBP1-202ENST00000461433 ABTB2Q8N961 1025 aa15.57■□□□□ 0.08
SSBP1-202ENST00000461433 NSD3Q9BZ95 1437 aa15.57■□□□□ 0.08
SSBP1-202ENST00000461433 ABCA3Q99758 1704 aa15.57■□□□□ 0.08
SSBP1-202ENST00000461433 ZNF316A6NFI3 1004 aaPredicted RBP15.57■□□□□ 0.08
SSBP1-202ENST00000461433 MED1Q15648 1581 aaPredicted RBP15.57■□□□□ 0.08
SSBP1-202ENST00000461433 USP54Q70EL1 1684 aa15.56■□□□□ 0.08
SSBP1-202ENST00000461433 PER1O15534 1290 aaPredicted RBP15.56■□□□□ 0.08
SSBP1-202ENST00000461433 NUTM2GQ5VZR2 741 aa15.56■□□□□ 0.08
SSBP1-202ENST00000461433 NME9Q86XW9 330 aa15.56■□□□□ 0.08
SSBP1-202ENST00000461433 ZRANB1Q9UGI0 708 aa15.56■□□□□ 0.08
SSBP1-202ENST00000461433 CABLES1Q8TDN4 633 aa15.55■□□□□ 0.08
SSBP1-202ENST00000461433 KIF20BQ96Q89 1820 aa15.54■□□□□ 0.08
SSBP1-202ENST00000461433 FYB1O15117 783 aa15.54■□□□□ 0.08
SSBP1-202ENST00000461433 SPATA31A6Q5VVP1 1343 aa15.54■□□□□ 0.08
SSBP1-202ENST00000461433 USP31Q70CQ4 1352 aa15.54■□□□□ 0.08
SSBP1-202ENST00000461433 PHRF1Q9P1Y6 1649 aaKnown RBP15.54■□□□□ 0.08
SSBP1-202ENST00000461433 NLRP6P59044 892 aa15.54■□□□□ 0.08
SSBP1-202ENST00000461433 LRP6O75581 1613 aa15.53■□□□□ 0.08
SSBP1-202ENST00000461433 USP19O94966 1318 aa15.53■□□□□ 0.08
SSBP1-202ENST00000461433 NLRP13Q86W25 1043 aa15.53■□□□□ 0.08
SSBP1-202ENST00000461433 SLIT3O75094 1523 aa15.52■□□□□ 0.07
SSBP1-202ENST00000461433 OVOS2A0A0J9YW53 1432 aa15.51■□□□□ 0.07
SSBP1-202ENST00000461433 OVOS2Q6IE36 1432 aa15.51■□□□□ 0.07
SSBP1-202ENST00000461433 PLEKHG5O94827 1062 aa15.51■□□□□ 0.07
SSBP1-202ENST00000461433 GGNBP2Q9H3C7 697 aa15.51■□□□□ 0.07
SSBP1-202ENST00000461433 CGNL1Q0VF96 1302 aa15.5■□□□□ 0.07
SSBP1-202ENST00000461433 NUTM2BA6NNL0 878 aaPredicted RBP15.5■□□□□ 0.07
SSBP1-202ENST00000461433 NUTM2EB1AL46 878 aaPredicted RBP15.5■□□□□ 0.07
SSBP1-202ENST00000461433 DDX10Q13206 875 aaKnown RBP15.5■□□□□ 0.07
SSBP1-202ENST00000461433 AMER1Q5JTC6 1135 aaPredicted RBP15.5■□□□□ 0.07
SSBP1-202ENST00000461433 NUTM2AQ8IVF1 878 aaPredicted RBP15.5■□□□□ 0.07
SSBP1-202ENST00000461433 ANKRD26Q9UPS8 1709 aa15.49■□□□□ 0.07
SSBP1-202ENST00000461433 KNSTRNQ9Y448 316 aa15.49■□□□□ 0.07
SSBP1-202ENST00000461433 GCP02774 474 aa15.48■□□□□ 0.07
SSBP1-202ENST00000461433 NFAT5O94916 1531 aa15.47■□□□□ 0.07
SSBP1-202ENST00000461433 COG3Q96JB2 828 aa15.47■□□□□ 0.07
SSBP1-202ENST00000461433 ADAMTS2O95450 1211 aa15.46■□□□□ 0.07
SSBP1-202ENST00000461433 NSD2O96028 1365 aa15.45■□□□□ 0.06
SSBP1-202ENST00000461433 FBLN1P23142 703 aa15.44■□□□□ 0.06
SSBP1-202ENST00000461433 HAP1P54257 671 aaPredicted RBP15.44■□□□□ 0.06
SSBP1-202ENST00000461433 NPC1L1Q9UHC9 1359 aa15.44■□□□□ 0.06
SSBP1-202ENST00000461433 FAM83GA6ND36 823 aa15.44■□□□□ 0.06
SSBP1-202ENST00000461433 ZC3H6P61129 1189 aaKnown RBP15.44■□□□□ 0.06
SSBP1-202ENST00000461433 KCNH5Q8NCM2 988 aa15.44■□□□□ 0.06
SSBP1-202ENST00000461433 CPDO75976 1380 aa15.44■□□□□ 0.06
SSBP1-202ENST00000461433 KIAA0232Q92628 1395 aa15.44■□□□□ 0.06
SSBP1-202ENST00000461433 LTN1O94822 1766 aa15.43■□□□□ 0.06
SSBP1-202ENST00000461433 COL18A1P39060 1754 aa15.43■□□□□ 0.06
SSBP1-202ENST00000461433 SOX12O15370 315 aa15.43■□□□□ 0.06
SSBP1-202ENST00000461433 ARHGEF25Q86VW2 580 aa15.43■□□□□ 0.06
SSBP1-202ENST00000461433 CC2D1BQ5T0F9 858 aaKnown RBP15.41■□□□□ 0.06
SSBP1-202ENST00000461433 COL14A1Q05707 1796 aaKnown RBP15.41■□□□□ 0.06
SSBP1-202ENST00000461433 PLCH1Q4KWH8 1693 aa15.41■□□□□ 0.06
SSBP1-202ENST00000461433 LMO7Q8WWI1 1683 aa15.41■□□□□ 0.06
SSBP1-202ENST00000461433 MAP2P11137 1827 aaKnown RBP15.41■□□□□ 0.06
SSBP1-202ENST00000461433 MEX3CQ5U5Q3 659 aaKnown RBP15.41■□□□□ 0.06
SSBP1-202ENST00000461433 C8orf37Q96NL8 207 aa15.41■□□□□ 0.06
SSBP1-202ENST00000461433 CHRNA2Q15822 529 aa15.4■□□□□ 0.06
SSBP1-202ENST00000461433 PRDM11Q9NQV5 511 aa15.4■□□□□ 0.06
SSBP1-202ENST00000461433 RGPD5Q99666 1765 aa15.4■□□□□ 0.06
SSBP1-202ENST00000461433 SLIT2O94813 1529 aa15.39■□□□□ 0.05
SSBP1-202ENST00000461433 MORC1Q86VD1 984 aa15.39■□□□□ 0.05
SSBP1-202ENST00000461433 FNBP4Q8N3X1 1017 aaPredicted RBP15.39■□□□□ 0.05
SSBP1-202ENST00000461433 NWD2Q9ULI1 1742 aa15.39■□□□□ 0.05
SSBP1-202ENST00000461433 AATKQ6ZMQ8 1374 aa15.39■□□□□ 0.05
SSBP1-202ENST00000461433 NGLY1Q96IV0 654 aa15.38■□□□□ 0.05
SSBP1-202ENST00000461433 CAMTA1Q9Y6Y1 1673 aa15.38■□□□□ 0.05
SSBP1-202ENST00000461433 PEAK1Q9H792 1746 aa15.38■□□□□ 0.05
SSBP1-202ENST00000461433 MAP3K19Q56UN5 1328 aa15.38■□□□□ 0.05
SSBP1-202ENST00000461433 BCL9LQ86UU0 1499 aa15.38■□□□□ 0.05
SSBP1-202ENST00000461433 TNNT2P45379 298 aaPredicted RBP15.38■□□□□ 0.05
SSBP1-202ENST00000461433 CNGB1Q14028 1251 aaPredicted RBP15.38■□□□□ 0.05
SSBP1-202ENST00000461433 RRS1Q15050 365 aaKnown RBP15.38■□□□□ 0.05
SSBP1-202ENST00000461433 AXIN2Q9Y2T1 843 aa15.38■□□□□ 0.05
SSBP1-202ENST00000461433 NRAPQ86VF7 1730 aa15.37■□□□□ 0.05
SSBP1-202ENST00000461433 RGS17Q9UGC6 210 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 279.6 ms