RNA–Protein interactions for RNA: ENST00000460887.1

AMPH-205, Transcript of amphiphysin, humanhuman

TSL 3

Gene AMPH, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMPH-205ENST00000460887 KRT28Q7Z3Y7 464 aa24.22■■□□□ 1.47
AMPH-205ENST00000460887 TTC21AQ8NDW8 1320 aa24.2■■□□□ 1.46
AMPH-205ENST00000460887 USP54Q70EL1 1684 aa24.2■■□□□ 1.46
AMPH-205ENST00000460887 FBXO41Q8TF61 875 aa24.19■■□□□ 1.46
AMPH-205ENST00000460887 NSD3Q9BZ95 1437 aa24.18■■□□□ 1.46
AMPH-205ENST00000460887 PIK3C2AO00443 1686 aa24.18■■□□□ 1.46
AMPH-205ENST00000460887 DDX17Q92841 729 aaKnown RBP24.18■■□□□ 1.46
AMPH-205ENST00000460887 CARD14Q9BXL6 1004 aa24.18■■□□□ 1.46
AMPH-205ENST00000460887 TNS3Q68CZ2 1445 aa24.18■■□□□ 1.46
AMPH-205ENST00000460887 TTC21BQ7Z4L5 1316 aa24.17■■□□□ 1.46
AMPH-205ENST00000460887 ANKRD26Q9UPS8 1709 aa24.17■■□□□ 1.46
AMPH-205ENST00000460887 SPATA31A3Q5VYP0 1347 aa24.15■■□□□ 1.46
AMPH-205ENST00000460887 PER1O15534 1290 aaPredicted RBP24.15■■□□□ 1.46
AMPH-205ENST00000460887 XPCQ01831 940 aaPredicted RBP24.15■■□□□ 1.46
AMPH-205ENST00000460887 DDX10Q13206 875 aaKnown RBP24.15■■□□□ 1.46
AMPH-205ENST00000460887 COL22A1Q8NFW1 1626 aaPredicted RBP24.14■■□□□ 1.46
AMPH-205ENST00000460887 LRRC59Q96AG4 307 aaKnown RBP24.14■■□□□ 1.45
AMPH-205ENST00000460887 SHPRHQ149N8 1683 aa24.14■■□□□ 1.45
AMPH-205ENST00000460887 ARHGEF10O15013 1369 aa24.14■■□□□ 1.45
AMPH-205ENST00000460887 MARF1Q9Y4F3 1742 aaKnown RBP24.13■■□□□ 1.45
AMPH-205ENST00000460887 KNSTRNQ9Y448 316 aa24.13■■□□□ 1.45
AMPH-205ENST00000460887 CGNL1Q0VF96 1302 aa24.12■■□□□ 1.45
AMPH-205ENST00000460887 MED1Q15648 1581 aaPredicted RBP24.12■■□□□ 1.45
AMPH-205ENST00000460887 NSD2O96028 1365 aa24.12■■□□□ 1.45
AMPH-205ENST00000460887 CRYBG1Q9Y4K1 1723 aa24.12■■□□□ 1.45
AMPH-205ENST00000460887 PAK3O75914 559 aaPredicted RBP24.11■■□□□ 1.45
AMPH-205ENST00000460887 NPC1L1Q9UHC9 1359 aa24.11■■□□□ 1.45
AMPH-205ENST00000460887 USP31Q70CQ4 1352 aa24.1■■□□□ 1.45
AMPH-205ENST00000460887 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.09■■□□□ 1.45
AMPH-205ENST00000460887 ABCA3Q99758 1704 aa24.08■■□□□ 1.45
AMPH-205ENST00000460887 ABTB2Q8N961 1025 aa24.08■■□□□ 1.45
AMPH-205ENST00000460887 PHRF1Q9P1Y6 1649 aaKnown RBP24.07■■□□□ 1.44
AMPH-205ENST00000460887 FYB1O15117 783 aa24.07■■□□□ 1.44
AMPH-205ENST00000460887 HSPA1LP34931 641 aa24.07■■□□□ 1.44
AMPH-205ENST00000460887 OVOS2A0A0J9YW53 1432 aa24.07■■□□□ 1.44
AMPH-205ENST00000460887 OVOS2Q6IE36 1432 aa24.07■■□□□ 1.44
AMPH-205ENST00000460887 PNPLA6Q8IY17 1366 aa24.06■■□□□ 1.44
AMPH-205ENST00000460887 AMER1Q5JTC6 1135 aaPredicted RBP24.06■■□□□ 1.44
AMPH-205ENST00000460887 NME9Q86XW9 330 aa24.06■■□□□ 1.44
AMPH-205ENST00000460887 JCADQ9P266 1359 aa24.05■■□□□ 1.44
AMPH-205ENST00000460887 NLRP13Q86W25 1043 aa24.05■■□□□ 1.44
AMPH-205ENST00000460887 SLIT3O75094 1523 aa24.05■■□□□ 1.44
AMPH-205ENST00000460887 NLRP6P59044 892 aa24.03■■□□□ 1.44
AMPH-205ENST00000460887 LMOD2Q6P5Q4 547 aa24.03■■□□□ 1.44
AMPH-205ENST00000460887 USP19O94966 1318 aa24.03■■□□□ 1.44
AMPH-205ENST00000460887 COG3Q96JB2 828 aa24.01■■□□□ 1.43
AMPH-205ENST00000460887 GGNBP2Q9H3C7 697 aa24■■□□□ 1.43
AMPH-205ENST00000460887 NUTM2GQ5VZR2 741 aa23.97■■□□□ 1.43
AMPH-205ENST00000460887 ZRANB1Q9UGI0 708 aa23.97■■□□□ 1.43
AMPH-205ENST00000460887 NFAT5O94916 1531 aa23.96■■□□□ 1.43
AMPH-205ENST00000460887 SPATA31A6Q5VVP1 1343 aa23.96■■□□□ 1.43
AMPH-205ENST00000460887 KCNH5Q8NCM2 988 aa23.96■■□□□ 1.43
AMPH-205ENST00000460887 LTN1O94822 1766 aa23.94■■□□□ 1.42
AMPH-205ENST00000460887 CC2D1BQ5T0F9 858 aaKnown RBP23.94■■□□□ 1.42
AMPH-205ENST00000460887 MORC1Q86VD1 984 aa23.93■■□□□ 1.42
AMPH-205ENST00000460887 MAP2P11137 1827 aaKnown RBP23.93■■□□□ 1.42
AMPH-205ENST00000460887 AATKQ6ZMQ8 1374 aa23.92■■□□□ 1.42
AMPH-205ENST00000460887 PARD3Q8TEW0 1356 aa23.92■■□□□ 1.42
AMPH-205ENST00000460887 GCP02774 474 aa23.92■■□□□ 1.42
AMPH-205ENST00000460887 CABLES1Q8TDN4 633 aa23.9■■□□□ 1.42
AMPH-205ENST00000460887 CPDO75976 1380 aa23.9■■□□□ 1.42
AMPH-205ENST00000460887 ABCC6O95255 1503 aa23.89■■□□□ 1.42
AMPH-205ENST00000460887 RALBP1Q15311 655 aa23.89■■□□□ 1.41
AMPH-205ENST00000460887 HAP1P54257 671 aaPredicted RBP23.88■■□□□ 1.41
AMPH-205ENST00000460887 COL14A1Q05707 1796 aaKnown RBP23.86■■□□□ 1.41
AMPH-205ENST00000460887 PRKRIP1Q9H875 184 aaPredicted RBP23.86■■□□□ 1.41
AMPH-205ENST00000460887 KIF24Q5T7B8 1368 aa23.86■■□□□ 1.41
AMPH-205ENST00000460887 SMG6Q86US8 1419 aaKnown RBP23.85■■□□□ 1.41
AMPH-205ENST00000460887 COL18A1P39060 1754 aa23.85■■□□□ 1.41
AMPH-205ENST00000460887 LRP6O75581 1613 aa23.84■■□□□ 1.41
AMPH-205ENST00000460887 DIEXFQ68CQ4 756 aaKnown RBP23.84■■□□□ 1.41
AMPH-205ENST00000460887 LMO7Q8WWI1 1683 aa23.83■■□□□ 1.41
AMPH-205ENST00000460887 RTL1A6NKG5 1358 aa23.83■■□□□ 1.41
AMPH-205ENST00000460887 ANP32CO43423 234 aa23.83■■□□□ 1.41
AMPH-205ENST00000460887 PLEKHG5O94827 1062 aa23.83■■□□□ 1.41
AMPH-205ENST00000460887 ARHGEF25Q86VW2 580 aa23.83■■□□□ 1.41
AMPH-205ENST00000460887 PEAK1Q9H792 1746 aa23.82■■□□□ 1.4
AMPH-205ENST00000460887 KIAA0232Q92628 1395 aa23.82■■□□□ 1.4
AMPH-205ENST00000460887 SOX12O15370 315 aa23.82■■□□□ 1.4
AMPH-205ENST00000460887 CNGB1Q14028 1251 aaPredicted RBP23.82■■□□□ 1.4
AMPH-205ENST00000460887 PLCH1Q4KWH8 1693 aa23.82■■□□□ 1.4
AMPH-205ENST00000460887 NWD2Q9ULI1 1742 aa23.81■■□□□ 1.4
AMPH-205ENST00000460887 NUTM2BA6NNL0 878 aaPredicted RBP23.81■■□□□ 1.4
AMPH-205ENST00000460887 NUTM2EB1AL46 878 aaPredicted RBP23.81■■□□□ 1.4
AMPH-205ENST00000460887 NUTM2AQ8IVF1 878 aaPredicted RBP23.81■■□□□ 1.4
AMPH-205ENST00000460887 MAP3K19Q56UN5 1328 aa23.81■■□□□ 1.4
AMPH-205ENST00000460887 TNNT2P45379 298 aaPredicted RBP23.8■■□□□ 1.4
AMPH-205ENST00000460887 ZC3H6P61129 1189 aaKnown RBP23.8■■□□□ 1.4
AMPH-205ENST00000460887 ILDR1Q86SU0 546 aaPredicted RBP23.8■■□□□ 1.4
AMPH-205ENST00000460887 CDK12Q9NYV4 1490 aaPredicted RBP23.8■■□□□ 1.4
AMPH-205ENST00000460887 MYBBP1AQ9BQG0 1328 aaKnown RBP23.8■■□□□ 1.4
AMPH-205ENST00000460887 RGPD5Q99666 1765 aa23.79■■□□□ 1.4
AMPH-205ENST00000460887 PRDM11Q9NQV5 511 aa23.79■■□□□ 1.4
AMPH-205ENST00000460887 POLKQ9UBT6 870 aa23.79■■□□□ 1.4
AMPH-205ENST00000460887 FLT4P35916 1363 aa23.78■■□□□ 1.4
AMPH-205ENST00000460887 PPP2R1AP30153 589 aa23.78■■□□□ 1.4
AMPH-205ENST00000460887 BLMP54132 1417 aaPredicted RBP23.77■■□□□ 1.4
AMPH-205ENST00000460887 FBLN1P23142 703 aa23.77■■□□□ 1.4
AMPH-205ENST00000460887 RRS1Q15050 365 aaKnown RBP23.77■■□□□ 1.4
AMPH-205ENST00000460887 ADAMTS2O95450 1211 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms