RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 GOLGA6L3A6NEY3 463 aa7.76□□□□□ -1.17
HLA-DQA1-205ENST00000460633 NINLQ9Y2I6 1382 aa7.76□□□□□ -1.17
HLA-DQA1-205ENST00000460633 CAMSAP1Q5T5Y3 1602 aa7.76□□□□□ -1.17
HLA-DQA1-205ENST00000460633 TRPM2O94759 1503 aa7.75□□□□□ -1.17
HLA-DQA1-205ENST00000460633 NEXNQ0ZGT2 675 aa7.75□□□□□ -1.17
HLA-DQA1-205ENST00000460633 VPS37DQ86XT2 251 aa7.75□□□□□ -1.17
HLA-DQA1-205ENST00000460633 HSCBQ8IWL3 235 aa7.75□□□□□ -1.17
HLA-DQA1-205ENST00000460633 MSH6P52701 1360 aa7.75□□□□□ -1.17
HLA-DQA1-205ENST00000460633 IPO8O15397 1037 aaKnown RBP7.75□□□□□ -1.17
HLA-DQA1-205ENST00000460633 DIP2AQ14689 1571 aa7.75□□□□□ -1.17
HLA-DQA1-205ENST00000460633 SYTL4Q96C24 671 aaPredicted RBP7.75□□□□□ -1.17
HLA-DQA1-205ENST00000460633 UGGT1Q9NYU2 1555 aa7.75□□□□□ -1.17
HLA-DQA1-205ENST00000460633 LRRIQ1Q96JM4 1722 aa7.75□□□□□ -1.17
HLA-DQA1-205ENST00000460633 DDX58O95786 925 aaKnown RBP7.75□□□□□ -1.17
HLA-DQA1-205ENST00000460633 SIRT1Q96EB6 747 aa7.74□□□□□ -1.17
HLA-DQA1-205ENST00000460633 SOX12O15370 315 aa7.74□□□□□ -1.17
HLA-DQA1-205ENST00000460633 FBXW7Q969H0 707 aa7.74□□□□□ -1.17
HLA-DQA1-205ENST00000460633 COG3Q96JB2 828 aa7.74□□□□□ -1.17
HLA-DQA1-205ENST00000460633 TMOD2Q9NZR1 351 aa7.74□□□□□ -1.17
HLA-DQA1-205ENST00000460633 PLEKHG1Q9ULL1 1385 aa7.74□□□□□ -1.17
HLA-DQA1-205ENST00000460633 TMEM87AQ8NBN3 555 aa7.74□□□□□ -1.17
HLA-DQA1-205ENST00000460633 CCDC43Q96MW1 224 aaKnown RBP7.74□□□□□ -1.17
HLA-DQA1-205ENST00000460633 CEP89Q96ST8 783 aa7.74□□□□□ -1.17
HLA-DQA1-205ENST00000460633 TBX22Q9Y458 520 aa7.74□□□□□ -1.17
HLA-DQA1-205ENST00000460633 PLA2R1Q13018 1463 aa7.74□□□□□ -1.17
HLA-DQA1-205ENST00000460633 RIMS1Q86UR5 1692 aaKnown RBP7.73□□□□□ -1.17
HLA-DQA1-205ENST00000460633 ADGRB3O60242 1522 aa7.73□□□□□ -1.17
HLA-DQA1-205ENST00000460633 KIDINS220Q9ULH0 1771 aa7.73□□□□□ -1.17
HLA-DQA1-205ENST00000460633 PTPRMP28827 1452 aa7.73□□□□□ -1.17
HLA-DQA1-205ENST00000460633 NEURL4Q96JN8 1562 aa7.73□□□□□ -1.17
HLA-DQA1-205ENST00000460633 VPS53Q5VIR6 699 aa7.73□□□□□ -1.17
HLA-DQA1-205ENST00000460633 BRD4O60885 1362 aaPredicted RBP7.73□□□□□ -1.17
HLA-DQA1-205ENST00000460633 NPHP4O75161 1426 aaPredicted RBP7.73□□□□□ -1.17
HLA-DQA1-205ENST00000460633 PLCB2Q00722 1185 aa7.73□□□□□ -1.17
HLA-DQA1-205ENST00000460633 TEFQ10587 303 aa7.73□□□□□ -1.17
HLA-DQA1-205ENST00000460633 SCAF11Q99590 1463 aaKnown RBP7.73□□□□□ -1.17
HLA-DQA1-205ENST00000460633 TRIM21P19474 475 aaKnown RBP7.72□□□□□ -1.17
HLA-DQA1-205ENST00000460633 KIF1BO60333 1816 aa7.72□□□□□ -1.17
HLA-DQA1-205ENST00000460633 CADPS2Q86UW7 1296 aa7.72□□□□□ -1.17
HLA-DQA1-205ENST00000460633 CHMP3Q9Y3E7 222 aa7.72□□□□□ -1.17
HLA-DQA1-205ENST00000460633 PTPRKQ15262 1439 aa7.72□□□□□ -1.17
HLA-DQA1-205ENST00000460633 CLTCQ00610 1675 aaKnown RBP7.72□□□□□ -1.17
HLA-DQA1-205ENST00000460633 ATAD2Q6PL18 1390 aa7.72□□□□□ -1.17
HLA-DQA1-205ENST00000460633 TMEM2Q9UHN6 1383 aa7.72□□□□□ -1.17
HLA-DQA1-205ENST00000460633 PUS7Q96PZ0 661 aaKnown RBP7.72□□□□□ -1.17
HLA-DQA1-205ENST00000460633 ZFYVE9O95405 1425 aa7.72□□□□□ -1.17
HLA-DQA1-205ENST00000460633 KIF3AQ9Y496 699 aa7.71□□□□□ -1.17
HLA-DQA1-205ENST00000460633 NCOA3Q9Y6Q9 1424 aa7.71□□□□□ -1.17
HLA-DQA1-205ENST00000460633 EXOC6Q8TAG9 804 aa7.71□□□□□ -1.18
HLA-DQA1-205ENST00000460633 PTPRTO14522 1441 aa7.71□□□□□ -1.18
HLA-DQA1-205ENST00000460633 LAMC1P11047 1609 aa7.71□□□□□ -1.18
HLA-DQA1-205ENST00000460633 CENPJQ9HC77 1338 aaPredicted RBP7.71□□□□□ -1.18
HLA-DQA1-205ENST00000460633 HMMRO75330 724 aa7.71□□□□□ -1.18
HLA-DQA1-205ENST00000460633 NF2P35240 595 aa7.71□□□□□ -1.18
HLA-DQA1-205ENST00000460633 RBM10P98175 930 aaKnown RBP7.71□□□□□ -1.18
HLA-DQA1-205ENST00000460633 MPHOSPH6Q99547 160 aaKnown RBP7.71□□□□□ -1.18
HLA-DQA1-205ENST00000460633 ZNF692Q9BU19 519 aaPredicted RBP7.71□□□□□ -1.18
HLA-DQA1-205ENST00000460633 MYOM2P54296 1465 aa7.7□□□□□ -1.18
HLA-DQA1-205ENST00000460633 KIF6Q6ZMV9 814 aa7.7□□□□□ -1.18
HLA-DQA1-205ENST00000460633 KIAA1211Q6ZU35 1233 aa7.7□□□□□ -1.18
HLA-DQA1-205ENST00000460633 ZBED9Q6R2W3 1325 aa7.7□□□□□ -1.18
HLA-DQA1-205ENST00000460633 AIDAQ96BJ3 306 aa7.7□□□□□ -1.18
HLA-DQA1-205ENST00000460633 PPRC1Q5VV67 1664 aaKnown RBP7.7□□□□□ -1.18
HLA-DQA1-205ENST00000460633 DEPDC5O75140 1603 aa7.7□□□□□ -1.18
HLA-DQA1-205ENST00000460633 KCNA6P17658 529 aa7.7□□□□□ -1.18
HLA-DQA1-205ENST00000460633 FBXO3Q9UK99 471 aa7.7□□□□□ -1.18
HLA-DQA1-205ENST00000460633 CGNL1Q0VF96 1302 aa7.7□□□□□ -1.18
HLA-DQA1-205ENST00000460633 PREX1Q8TCU6 1659 aa7.7□□□□□ -1.18
HLA-DQA1-205ENST00000460633 NAP1L2Q9ULW6 460 aaPredicted RBP7.69□□□□□ -1.18
HLA-DQA1-205ENST00000460633 FRMPD1Q5SYB0 1578 aa7.69□□□□□ -1.18
HLA-DQA1-205ENST00000460633 NOS1P29475 1434 aa7.69□□□□□ -1.18
HLA-DQA1-205ENST00000460633 SYNMO15061 1565 aa7.69□□□□□ -1.18
HLA-DQA1-205ENST00000460633 SPATA31D1Q6ZQQ2 1576 aa7.69□□□□□ -1.18
HLA-DQA1-205ENST00000460633 BRPF3Q9ULD4 1205 aa7.69□□□□□ -1.18
HLA-DQA1-205ENST00000460633 DHX37Q8IY37 1157 aaKnown RBP7.69□□□□□ -1.18
HLA-DQA1-205ENST00000460633 ZNF652Q9Y2D9 606 aa7.68□□□□□ -1.18
HLA-DQA1-205ENST00000460633 IDI1Q13907 227 aa7.68□□□□□ -1.18
HLA-DQA1-205ENST00000460633 GNL3LQ9NVN8 582 aaKnown RBP7.68□□□□□ -1.18
HLA-DQA1-205ENST00000460633 RBM27Q9P2N5 1060 aaKnown RBP7.68□□□□□ -1.18
HLA-DQA1-205ENST00000460633 GBP4Q96PP9 640 aa7.68□□□□□ -1.18
HLA-DQA1-205ENST00000460633 CPS1P31327 1500 aa7.68□□□□□ -1.18
HLA-DQA1-205ENST00000460633 SPHKAPQ2M3C7 1700 aa7.68□□□□□ -1.18
HLA-DQA1-205ENST00000460633 PLIN1O60240 522 aa7.68□□□□□ -1.18
HLA-DQA1-205ENST00000460633 TATP17735 454 aaPredicted RBP7.68□□□□□ -1.18
HLA-DQA1-205ENST00000460633 BAG6P46379 1132 aa7.68□□□□□ -1.18
HLA-DQA1-205ENST00000460633 PRKRIP1Q9H875 184 aaPredicted RBP7.68□□□□□ -1.18
HLA-DQA1-205ENST00000460633 CEP170BQ9Y4F5 1589 aaPredicted RBP7.68□□□□□ -1.18
HLA-DQA1-205ENST00000460633 SYNE3Q6ZMZ3 975 aa7.68□□□□□ -1.18
HLA-DQA1-205ENST00000460633 KTN1Q86UP2 1357 aaKnown RBP7.67□□□□□ -1.18
HLA-DQA1-205ENST00000460633 SPDYE4A6NLX3 237 aa7.67□□□□□ -1.18
HLA-DQA1-205ENST00000460633 RRP1P56182 461 aaKnown RBP7.67□□□□□ -1.18
HLA-DQA1-205ENST00000460633 RALBP1Q15311 655 aa7.67□□□□□ -1.18
HLA-DQA1-205ENST00000460633 AKAP17AQ02040 695 aaKnown RBP7.67□□□□□ -1.18
HLA-DQA1-205ENST00000460633 CCDC47Q96A33 483 aaKnown RBP7.67□□□□□ -1.18
HLA-DQA1-205ENST00000460633 KDM5AP29375 1690 aaKnown RBP7.67□□□□□ -1.18
HLA-DQA1-205ENST00000460633 IQSEC2Q5JU85 1478 aa7.67□□□□□ -1.18
HLA-DQA1-205ENST00000460633 MADDQ8WXG6 1647 aa7.67□□□□□ -1.18
HLA-DQA1-205ENST00000460633 NFKBIBQ15653 356 aa7.67□□□□□ -1.18
HLA-DQA1-205ENST00000460633 SLC3A2P08195 630 aaKnown RBP7.67□□□□□ -1.18
HLA-DQA1-205ENST00000460633 FAM161AQ3B820 660 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms