RNA–Protein interactions for RNA: ENST00000460475.1

PLOD3-209, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 3

Gene PLOD3, Length 746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-209ENST00000460475 AFF2P51816 1311 aa25.02■■□□□ 1.6
PLOD3-209ENST00000460475 PAK3O75914 559 aaPredicted RBP25.01■■□□□ 1.59
PLOD3-209ENST00000460475 FNBP4Q8N3X1 1017 aaPredicted RBP25■■□□□ 1.59
PLOD3-209ENST00000460475 CABLES1Q8TDN4 633 aa25■■□□□ 1.59
PLOD3-209ENST00000460475 NGLY1Q96IV0 654 aa25■■□□□ 1.59
PLOD3-209ENST00000460475 ZNF692Q9BU19 519 aaPredicted RBP25■■□□□ 1.59
PLOD3-209ENST00000460475 USP6P35125 1406 aa25■■□□□ 1.59
PLOD3-209ENST00000460475 AKAP12Q02952 1782 aa24.99■■□□□ 1.59
PLOD3-209ENST00000460475 CPSF1Q10570 1443 aaKnown RBP24.99■■□□□ 1.59
PLOD3-209ENST00000460475 SSH2Q76I76 1423 aa24.99■■□□□ 1.59
PLOD3-209ENST00000460475 CRYBG1Q9Y4K1 1723 aa24.99■■□□□ 1.59
PLOD3-209ENST00000460475 HAP1P54257 671 aaPredicted RBP24.94■■□□□ 1.58
PLOD3-209ENST00000460475 TMF1P82094 1093 aa24.94■■□□□ 1.58
PLOD3-209ENST00000460475 CD163L1Q9NR16 1453 aa24.94■■□□□ 1.58
PLOD3-209ENST00000460475 ABTB2Q8N961 1025 aa24.93■■□□□ 1.58
PLOD3-209ENST00000460475 SLIT2O94813 1529 aa24.92■■□□□ 1.58
PLOD3-209ENST00000460475 SLC12A5Q9H2X9 1139 aa24.92■■□□□ 1.58
PLOD3-209ENST00000460475 MON2Q7Z3U7 1717 aa24.92■■□□□ 1.58
PLOD3-209ENST00000460475 NINLQ9Y2I6 1382 aa24.92■■□□□ 1.58
PLOD3-209ENST00000460475 BCL9LQ86UU0 1499 aa24.91■■□□□ 1.58
PLOD3-209ENST00000460475 USP21Q9UK80 565 aa24.91■■□□□ 1.58
PLOD3-209ENST00000460475 USP19O94966 1318 aa24.9■■□□□ 1.58
PLOD3-209ENST00000460475 PLEKHG5O94827 1062 aa24.9■■□□□ 1.58
PLOD3-209ENST00000460475 TMC1Q8TDI8 760 aa24.9■■□□□ 1.58
PLOD3-209ENST00000460475 KTN1Q86UP2 1357 aaKnown RBP24.9■■□□□ 1.58
PLOD3-209ENST00000460475 PHRF1Q9P1Y6 1649 aaKnown RBP24.9■■□□□ 1.58
PLOD3-209ENST00000460475 TTC21BQ7Z4L5 1316 aa24.89■■□□□ 1.58
PLOD3-209ENST00000460475 NRKQ7Z2Y5 1582 aa24.89■■□□□ 1.58
PLOD3-209ENST00000460475 EIF4G2P78344 907 aaKnown RBP eCLIP24.89■■□□□ 1.58
PLOD3-209ENST00000460475 CDCA8Q53HL2 280 aa24.89■■□□□ 1.58
PLOD3-209ENST00000460475 NUTM2GQ5VZR2 741 aa24.89■■□□□ 1.58
PLOD3-209ENST00000460475 NLRP13Q86W25 1043 aa24.89■■□□□ 1.58
PLOD3-209ENST00000460475 QTRT2Q9H974 415 aaKnown RBP24.89■■□□□ 1.58
PLOD3-209ENST00000460475 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.89■■□□□ 1.57
PLOD3-209ENST00000460475 TTC21AQ8NDW8 1320 aa24.88■■□□□ 1.57
PLOD3-209ENST00000460475 NWD2Q9ULI1 1742 aa24.87■■□□□ 1.57
PLOD3-209ENST00000460475 FAM83GA6ND36 823 aa24.87■■□□□ 1.57
PLOD3-209ENST00000460475 TERF2IPQ9NYB0 399 aa24.87■■□□□ 1.57
PLOD3-209ENST00000460475 PIK3C2AO00443 1686 aa24.87■■□□□ 1.57
PLOD3-209ENST00000460475 RXRBP28702 533 aa24.86■■□□□ 1.57
PLOD3-209ENST00000460475 HDGFL2Q7Z4V5 671 aaPredicted RBP24.86■■□□□ 1.57
PLOD3-209ENST00000460475 TRPC5Q9UL62 973 aaPredicted RBP24.86■■□□□ 1.57
PLOD3-209ENST00000460475 ATRNO75882 1429 aa24.86■■□□□ 1.57
PLOD3-209ENST00000460475 PLCH1Q4KWH8 1693 aa24.85■■□□□ 1.57
PLOD3-209ENST00000460475 HSPA5P11021 654 aaKnown RBP24.85■■□□□ 1.57
PLOD3-209ENST00000460475 UNC5CLQ8IV45 518 aa24.85■■□□□ 1.57
PLOD3-209ENST00000460475 COL14A1Q05707 1796 aaKnown RBP24.85■■□□□ 1.57
PLOD3-209ENST00000460475 A0A1W2PP64 1363 aa24.84■■□□□ 1.57
PLOD3-209ENST00000460475 SOCS7O14512 581 aa24.84■■□□□ 1.57
PLOD3-209ENST00000460475 NLRP6P59044 892 aa24.84■■□□□ 1.57
PLOD3-209ENST00000460475 RBM6P78332 1123 aaKnown RBP24.84■■□□□ 1.57
PLOD3-209ENST00000460475 CDK12Q9NYV4 1490 aaPredicted RBP24.83■■□□□ 1.57
PLOD3-209ENST00000460475 SLIT3O75094 1523 aa24.82■■□□□ 1.56
PLOD3-209ENST00000460475 GCP02774 474 aa24.82■■□□□ 1.56
PLOD3-209ENST00000460475 EDC4Q6P2E9 1401 aaKnown RBP24.82■■□□□ 1.56
PLOD3-209ENST00000460475 CPDO75976 1380 aa24.81■■□□□ 1.56
PLOD3-209ENST00000460475 KIAA0232Q92628 1395 aa24.8■■□□□ 1.56
PLOD3-209ENST00000460475 PRDM11Q9NQV5 511 aa24.8■■□□□ 1.56
PLOD3-209ENST00000460475 USP31Q70CQ4 1352 aa24.8■■□□□ 1.56
PLOD3-209ENST00000460475 ANKRD36BQ8N2N9 1353 aa24.8■■□□□ 1.56
PLOD3-209ENST00000460475 USP54Q70EL1 1684 aa24.78■■□□□ 1.56
PLOD3-209ENST00000460475 ZC3H6P61129 1189 aaKnown RBP24.78■■□□□ 1.56
PLOD3-209ENST00000460475 NRAPQ86VF7 1730 aa24.78■■□□□ 1.56
PLOD3-209ENST00000460475 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.77■■□□□ 1.56
PLOD3-209ENST00000460475 BTG4Q9NY30 223 aa24.77■■□□□ 1.56
PLOD3-209ENST00000460475 MYOM1P52179 1685 aa24.76■■□□□ 1.55
PLOD3-209ENST00000460475 VPS72Q15906 364 aa24.76■■□□□ 1.55
PLOD3-209ENST00000460475 GJD4Q96KN9 370 aaPredicted RBP24.76■■□□□ 1.55
PLOD3-209ENST00000460475 KCNH5Q8NCM2 988 aa24.74■■□□□ 1.55
PLOD3-209ENST00000460475 CHRNA2Q15822 529 aa24.73■■□□□ 1.55
PLOD3-209ENST00000460475 NME9Q86XW9 330 aa24.73■■□□□ 1.55
PLOD3-209ENST00000460475 LMO7Q8WWI1 1683 aa24.72■■□□□ 1.55
PLOD3-209ENST00000460475 GLI3P10071 1580 aa24.72■■□□□ 1.55
PLOD3-209ENST00000460475 RGS12O14924 1447 aa24.72■■□□□ 1.55
PLOD3-209ENST00000460475 ZRANB1Q9UGI0 708 aa24.71■■□□□ 1.55
PLOD3-209ENST00000460475 NFAT5O94916 1531 aa24.7■■□□□ 1.54
PLOD3-209ENST00000460475 OVOS2A0A0J9YW53 1432 aa24.69■■□□□ 1.54
PLOD3-209ENST00000460475 OVOS2Q6IE36 1432 aa24.69■■□□□ 1.54
PLOD3-209ENST00000460475 CAMTA1Q9Y6Y1 1673 aa24.69■■□□□ 1.54
PLOD3-209ENST00000460475 AATKQ6ZMQ8 1374 aa24.68■■□□□ 1.54
PLOD3-209ENST00000460475 COL18A1P39060 1754 aa24.68■■□□□ 1.54
PLOD3-209ENST00000460475 ARHGEF25Q86VW2 580 aa24.68■■□□□ 1.54
PLOD3-209ENST00000460475 C11orf95C9JLR9 678 aaPredicted RBP24.67■■□□□ 1.54
PLOD3-209ENST00000460475 ONECUT3O60422 494 aaPredicted RBP24.67■■□□□ 1.54
PLOD3-209ENST00000460475 CARD14Q9BXL6 1004 aa24.66■■□□□ 1.54
PLOD3-209ENST00000460475 SPATA31A5Q5VU36 1347 aa24.65■■□□□ 1.54
PLOD3-209ENST00000460475 SPATA31A7Q8IWB4 1347 aa24.65■■□□□ 1.54
PLOD3-209ENST00000460475 FYB1O15117 783 aa24.63■■□□□ 1.53
PLOD3-209ENST00000460475 CCDC9Q9Y3X0 531 aaKnown RBP24.63■■□□□ 1.53
PLOD3-209ENST00000460475 ABCC6O95255 1503 aa24.62■■□□□ 1.53
PLOD3-209ENST00000460475 COL5A2P05997 1499 aaPredicted RBP24.62■■□□□ 1.53
PLOD3-209ENST00000460475 COG3Q96JB2 828 aa24.61■■□□□ 1.53
PLOD3-209ENST00000460475 SPATA31A1Q5TZJ5 1347 aa24.61■■□□□ 1.53
PLOD3-209ENST00000460475 SOX12O15370 315 aa24.6■■□□□ 1.53
PLOD3-209ENST00000460475 EVA1CP58658 441 aa24.6■■□□□ 1.53
PLOD3-209ENST00000460475 POLR3GLQ9BT43 218 aa24.6■■□□□ 1.53
PLOD3-209ENST00000460475 STRN4Q9NRL3 753 aa24.6■■□□□ 1.53
PLOD3-209ENST00000460475 AXIN2Q9Y2T1 843 aa24.6■■□□□ 1.53
PLOD3-209ENST00000460475 NSD3Q9BZ95 1437 aa24.59■■□□□ 1.53
PLOD3-209ENST00000460475 KIF20BQ96Q89 1820 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms